Rmu_sc0002584.1_g000062

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002584.1
OG0000087
Physical Location & Seq
Reverse (-)
174066 .. 176714
2649 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002584.1_g000062.1.cds

Sequence Viewer

Length: 1935 bp
atggtcttggttctgcatgaatttctggatatagcgacatttgaggtccccggtaccgtagttaggatggaatcagaagccaggggtggggatatgggatcgtcgtaccagtcttctgccaggcaagctgaagtggatatcgaccggtacctaggccgagtagatcaattagcagagaacacaggatcctcgactggggtgttctcggagagtagtgaggagtccgacgaggcctctcagggatggagagatggccgcgaatcctgccccggggtgggttgcgctgcaagagaatcagctccaccaagggttatcgctaccgctgccctagtgcctacagtatctgctgcggatgctgaacctgtcctcggggcagctgaccccgaatgccatttgccagatatacagaagcagtcttgtgcgggtacggttacatttgccgctagggattacgaaccactagttaccgacatgccttcctcgatgagcaaaaggtggaggaacaaagtgttcctagctggggggcggtggcaaattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatactctatctaaagtagaaaggaagaggatagcccgggtatacgctgtttggtcagagaaagagaggagctcttatagattcatccggcactctatactttataggctagggctagggtggctccctgtgaaagcgccgaagaggaaaccccggaaaggcaaggaggaggatagaatggatgatgcccaattgatagatatgttgatgggccagggggaagacgcccttcacatcgatctcgacctagggtcgaaaggtacaagtcggtcaattgaagaaacccttctggagatcaccgatgagggatatggtgaacctgaccctgacgctcccgtgacccacgtcgtgcagccctccctggccgacgttatcacgatagatgacactgggacgggaaaggtaccggtccccgtgcctatttcctctcgttccactgggagcaatgaggcgttgattcctggtgagaagaagagatcccataggcaccggcatcgaagtgataaggaggtgacgtacactggccgggatgttcaagattttggtgcgaagaggcagaagaaagatcaccagggatcagagtcgtcgccttcgcttggcttgttatctcccacgattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgccgatgaaaagtttgtgcggtccatgcttggtgacctgaaggatattgacctcgaccgggttcgggccaaggataatacgccccaggagaatcgccgtcttgcccgggaatcaatgatgcgggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggaggctagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcattgaaggctgagatggctgccgctaagcagaggatcgcggagcttgagggtgaagtctctgaggcgcgggaagaggtaaaaaactcccgggactccgagaaaaaagctgcagagtctgccgtgtcatggaaggagaaggcagaccacctggaggatcaccttcccgtggagaggcacgtggccgtggaggagtataagtcctcggaagagctaatcgctatgctggctgctgcccaagataaggctgttatcatgaaattcaaagagtgggtggcggccggatatttagatgaagctaaattcaggcgggctctcctggagaaaaagaagaaagatcgggaggcggggccaagtctggtgccggtgggtcctagagtaccggcggcgagtgctatgtctgggaatgtccggggtaggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

644

Amino Acids

71.3

Weight (kDa)

6.07

Isoelectric Point (pI)

50.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1453
Acc36I ACCTGC 1 cut(s) 1453
Acc65I GGTACC 4 cut(s) 53, 147, 563, 994
AccB1I GGYRCC 6 cut(s) 53, 147, 563, 994, 1077, 1873
AccBSI CCGCTC 1 cut(s) 1507
AccI GTMKAC 1 cut(s) 633
AccII CGCG 3 cut(s) 258, 1553, 1582
AclWI GGATC 7 cut(s) 106, 180, 193, 1062, 1174, 1556, 1677
AcoI YGGCCR 5 cut(s) 253, 954, 1114, 1695, 1791
AcsI RAATTY 3 cut(s) 20, 1772, 1814
AcuI CTGAAG 3 cut(s) 150, 1319, 1454
AcvI CACGTG 1 cut(s) 1693
AcyI GRCGYC 2 cut(s) 816, 1410
AdeI CACNNNGTG 1 cut(s) 940
AgeI ACCGGT 3 cut(s) 144, 560, 997
AgsI TTSAA 5 cut(s) 869, 1127, 1393, 1519, 1777
AhdI GACNNNNNGTC 1 cut(s) 841
AhlI ACTAGT 1 cut(s) 460
AjiI CACGTC 1 cut(s) 937
AjnI CCWGG 9 cut(s) 80, 119, 804, 951, 1051, 1161, 1344, 1662, 1830
AloI GAACNNNNNNTCC 2 cut(s) 170, 202
Alw21I GWGCWC 1 cut(s) 665
Alw26I GTCTC 1 cut(s) 1576
AlwI GGATC 7 cut(s) 106, 180, 193, 1062, 1174, 1556, 1677
AlwNI CAGNNNCTG 3 cut(s) 344, 1243, 1631
Ama87I CYCGRG 5 cut(s) 269, 368, 627, 1365, 1602
ApoI RAATTY 3 cut(s) 20, 1772, 1814
AsiGI ACCGGT 3 cut(s) 144, 560, 997
Asp700I GAANNNNTTC 1 cut(s) 876
Asp718I GGTACC 4 cut(s) 53, 147, 563, 994
AspA2I CCTAGG 2 cut(s) 151, 838
AspLEI GCGC 3 cut(s) 284, 730, 1582
AspS9I GGNCC 8 cut(s) 46, 583, 802, 1000, 1281, 1326, 1862, 1883
AsuHPI GGTGA 9 cut(s) 880, 917, 1067, 1114, 1151, 1304, 1477, 1577, 1664
AsuNHI GCTAGC 1 cut(s) 1445
AvaI CYCGRG 5 cut(s) 269, 368, 627, 1365, 1602
AvaII GGWCC 5 cut(s) 46, 583, 1000, 1281, 1883
AvrII CCTAGG 2 cut(s) 151, 838
BaeGI GKGCMC 1 cut(s) 1387
BaeI ACNNNNGTAYC 2 cut(s) 45, 78
BamHI GGATCC 1 cut(s) 185
BanI GGYRCC 6 cut(s) 53, 147, 563, 994, 1077, 1873
BanII GRGCYC 2 cut(s) 665, 1828
BbrPI CACGTG 1 cut(s) 1693
BbsI GAAGAC 2 cut(s) 105, 819
Bbv12I GWGCWC 1 cut(s) 665
BccI CCATC 6 cut(s) 61, 237, 245, 793, 1238, 1522
BceAI ACGGC 3 cut(s) 1341, 1619, 1682
BcgI CGANNNNNNTGC 2 cut(s) 1067, 1101
BciT130I CCWGG 9 cut(s) 82, 121, 806, 953, 1053, 1163, 1346, 1664, 1832
BcoDI GTCTC 1 cut(s) 1576
BcuI ACTAGT 1 cut(s) 460
BfmI CTRYAG 2 cut(s) 336, 1623
BfoI RGCGCY 1 cut(s) 731
BfuAI ACCTGC 1 cut(s) 1453
BlnI CCTAGG 2 cut(s) 151, 838
BlpI GCTNAGC 1 cut(s) 1539
Bme18I GGWCC 5 cut(s) 46, 583, 1000, 1281, 1883
BmeRI GACNNNNNGTC 1 cut(s) 841
BmeT110I CYCGRG 5 cut(s) 269, 368, 627, 1365, 1602
BmgBI CACGTC 1 cut(s) 937
BmgT120I GGNCC 8 cut(s) 46, 583, 802, 1000, 1281, 1326, 1862, 1883
BmrI ACTGGG 3 cut(s) 204, 990, 1038
BmsI GCATC 4 cut(s) 343, 766, 1093, 1368
BmtI GCTAGC 1 cut(s) 1449
BmuI ACTGGG 3 cut(s) 204, 990, 1038
BoxI GACNNNNGTC 1 cut(s) 935
BpiI GAAGAC 2 cut(s) 105, 819
BplI GAGNNNNNCTC 4 cut(s) 647, 679, 1496, 1528
BpmI CTGGAG 4 cut(s) 902, 1517, 1685, 1853
Bpu1102I GCTNAGC 1 cut(s) 1539
BpuEI CTTGAG 1 cut(s) 1580
Bsa29I ATCGAT 1 cut(s) 828
BsaAI YACGTR 1 cut(s) 1693
BsaBI GATNNNNATC 1 cut(s) 1428
BsaHI GRCGYC 2 cut(s) 816, 1410
BsaWI WCCGGW 4 cut(s) 144, 560, 997, 1210
BsaXI ACNNNNNCTCC 4 cut(s) 1091, 1121, 1697, 1727
Bse118I RCCGGY 6 cut(s) 144, 560, 997, 1080, 1876, 1894
Bse1I ACTGG 6 cut(s) 109, 199, 586, 985, 1033, 1117
Bse3DI GCAATG 1 cut(s) 1042
Bse8I GATNNNNATC 1 cut(s) 1428
BseBI CCWGG 9 cut(s) 82, 121, 806, 953, 1053, 1163, 1346, 1664, 1832
BseCI ATCGAT 1 cut(s) 828
BseGI GGATG 6 cut(s) 72, 248, 358, 675, 778, 1126
BseJI GATNNNNATC 1 cut(s) 1428
BseMI GCAATG 1 cut(s) 1042
BseMII CTCAG 4 cut(s) 251, 1235, 1515, 1566
BseNI ACTGG 6 cut(s) 109, 199, 586, 985, 1033, 1117
BseRI GAGGAG 5 cut(s) 233, 673, 773, 1454, 1718
BseSI GKGCMC 1 cut(s) 1387
BseX3I CGGCCG 1 cut(s) 1791
BseYI CCCAGC 1 cut(s) 518
BsgI GTGCAG 1 cut(s) 962
Bsh1236I CGCG 3 cut(s) 258, 1553, 1582
Bsh1285I CGRYCG 3 cut(s) 145, 1318, 1794
BshNI GGYRCC 6 cut(s) 53, 147, 563, 994, 1077, 1873
BshTI ACCGGT 3 cut(s) 144, 560, 997
BshVI ATCGAT 1 cut(s) 828
BsiEI CGRYCG 3 cut(s) 145, 1318, 1794
BsiHKAI GWGCWC 1 cut(s) 665
BsiHKCI CYCGRG 5 cut(s) 269, 368, 627, 1365, 1602
BslFI GGGAC 6 cut(s) 32, 596, 986, 997, 1523, 1619
BsmAI GTCTC 1 cut(s) 1576
BsmFI GGGAC 6 cut(s) 32, 596, 986, 997, 1523, 1619
BsmI GAATGC 1 cut(s) 392
BsoBI CYCGRG 5 cut(s) 269, 368, 627, 1365, 1602
Bsp1286I GDGCHC 3 cut(s) 665, 1387, 1828
Bsp1720I GCTNAGC 1 cut(s) 1539
BspCNI CTCAG 4 cut(s) 250, 1236, 1516, 1567
BspDI ATCGAT 1 cut(s) 828
BspFNI CGCG 3 cut(s) 258, 1553, 1582
BspHI TCATGA 1 cut(s) 1767
BspMAI CTGCAG 1 cut(s) 1627
BspMI ACCTGC 1 cut(s) 1453
BspOI GCTAGC 1 cut(s) 1449
BspPI GGATC 7 cut(s) 106, 180, 193, 1062, 1174, 1556, 1677
BspQI GCTCTTC 1 cut(s) 1716
BspT107I GGYRCC 6 cut(s) 53, 147, 563, 994, 1077, 1873
BsrBI CCGCTC 1 cut(s) 1507
BsrDI GCAATG 1 cut(s) 1042
BsrFI RCCGGY 6 cut(s) 144, 560, 997, 1080, 1876, 1894
BsrI ACTGG 6 cut(s) 109, 199, 586, 985, 1033, 1117
BssAI RCCGGY 6 cut(s) 144, 560, 997, 1080, 1876, 1894
BssNAI GTATAC 1 cut(s) 634
BssNI GRCGYC 2 cut(s) 816, 1410
BssT1I CCWWGG 4 cut(s) 151, 305, 838, 1329
Bst1107I GTATAC 1 cut(s) 634
Bst2UI CCWGG 9 cut(s) 82, 121, 806, 953, 1053, 1163, 1346, 1664, 1832
Bst4CI ACNGT 3 cut(s) 58, 340, 430
Bst6I CTCTTC 7 cut(s) 611, 728, 1058, 1136, 1394, 1581, 1716
BstACI GRCGYC 2 cut(s) 816, 1410
BstAPI GCANNNNNTGC 1 cut(s) 1631
BstBAI YACGTR 1 cut(s) 1693
BstC8I GCNNGC 6 cut(s) 126, 1383, 1414, 1447, 1740, 1824
BstDEI CTNAG 5 cut(s) 237, 1244, 1524, 1539, 1575
BstDSI CCRYGG 2 cut(s) 1680, 1698
BstEII GGTNACC 1 cut(s) 1292
BstF5I GGATG 6 cut(s) 72, 248, 358, 675, 778, 1126
BstFNI CGCG 3 cut(s) 258, 1553, 1582
BstH2I RGCGCY 1 cut(s) 731
BstHHI GCGC 3 cut(s) 284, 730, 1582
BstMAI GTCTC 1 cut(s) 1576
BstMCI CGRYCG 3 cut(s) 145, 1318, 1794
BstNI CCWGG 9 cut(s) 82, 121, 806, 953, 1053, 1163, 1346, 1664, 1832
BstNSI RCATGY 1 cut(s) 475
BstPAI GACNNNNGTC 1 cut(s) 935
BstPI GGTNACC 1 cut(s) 1292
BstSFI CTRYAG 2 cut(s) 336, 1623
BstSLI GKGCMC 1 cut(s) 1387
BstUI CGCG 3 cut(s) 258, 1553, 1582
BstV2I GAAGAC 2 cut(s) 105, 819
BstX2I RGATCY 2 cut(s) 185, 1067
BstYI RGATCY 2 cut(s) 185, 1067
BstZ17I GTATAC 1 cut(s) 634
BstZI CGGCCG 1 cut(s) 1791
Bsu15I ATCGAT 1 cut(s) 828
BsuTUI ATCGAT 1 cut(s) 828
BtgI CCRYGG 2 cut(s) 1680, 1698
BtrI CACGTC 1 cut(s) 937
BtsCI GGATG 6 cut(s) 72, 248, 358, 675, 778, 1126
BtsIMutI CAGTG 3 cut(s) 978, 1026, 1110
BveI ACCTGC 1 cut(s) 1453
Cac8I GCNNGC 6 cut(s) 126, 1383, 1414, 1447, 1740, 1824
CaiI CAGNNNCTG 3 cut(s) 344, 1243, 1631
CciI TCATGA 1 cut(s) 1767
CfoI GCGC 3 cut(s) 284, 730, 1582
Cfr10I RCCGGY 6 cut(s) 144, 560, 997, 1080, 1876, 1894
Cfr13I GGNCC 8 cut(s) 46, 583, 802, 1000, 1281, 1326, 1862, 1883
Cfr9I CCCGGG 4 cut(s) 269, 627, 1365, 1602
ClaI ATCGAT 1 cut(s) 828
CseI GACGC 3 cut(s) 824, 929, 1418
CspAI ACCGGT 3 cut(s) 144, 560, 997
CviAII CATG 6 cut(s) 17, 472, 1285, 1478, 1641, 1768
DdeI CTNAG 5 cut(s) 237, 1244, 1524, 1539, 1575
DraIII CACNNNGTG 1 cut(s) 940
DriI GACNNNNNGTC 1 cut(s) 841
EaeI YGGCCR 5 cut(s) 253, 954, 1114, 1695, 1791
EagI CGGCCG 1 cut(s) 1791
Eam1104I CTCTTC 7 cut(s) 611, 728, 1058, 1136, 1394, 1581, 1716
Eam1105I GACNNNNNGTC 1 cut(s) 841
EarI CTCTTC 7 cut(s) 611, 728, 1058, 1136, 1394, 1581, 1716
Ecl136II GAGCTC 1 cut(s) 663
EclXI CGGCCG 1 cut(s) 1791
Eco130I CCWWGG 4 cut(s) 151, 305, 838, 1329
Eco147I AGGCCT 1 cut(s) 233
Eco24I GRGCYC 2 cut(s) 665, 1828
Eco32I GATATC 1 cut(s) 139
Eco47I GGWCC 5 cut(s) 46, 583, 1000, 1281, 1883
Eco52I CGGCCG 1 cut(s) 1791
Eco53kI GAGCTC 1 cut(s) 663
Eco57I CTGAAG 3 cut(s) 150, 1319, 1454
Eco72I CACGTG 1 cut(s) 1693
Eco88I CYCGRG 5 cut(s) 269, 368, 627, 1365, 1602
Eco91I GGTNACC 1 cut(s) 1292
EcoICRI GAGCTC 1 cut(s) 663
EcoO109I RGGNCCY 2 cut(s) 46, 1883
EcoO65I GGTNACC 1 cut(s) 1292
EcoRII CCWGG 9 cut(s) 80, 119, 804, 951, 1051, 1161, 1344, 1662, 1830
EcoRV GATATC 1 cut(s) 139
EcoT14I CCWWGG 4 cut(s) 151, 305, 838, 1329
EcoT38I GRGCYC 2 cut(s) 665, 1828
ErhI CCWWGG 4 cut(s) 151, 305, 838, 1329
FaeI CATG 6 cut(s) 20, 475, 1288, 1481, 1644, 1771
FalI AAGNNNNNCTT 4 cut(s) 804, 836, 861, 893
FaqI GGGAC 6 cut(s) 32, 596, 986, 997, 1523, 1619
FatI CATG 6 cut(s) 16, 471, 1284, 1477, 1640, 1767
FauI CCCGC 6 cut(s) 415, 1374, 1500, 1575, 1815, 1852
FblI GTMKAC 1 cut(s) 633
FokI GGATG 6 cut(s) 79, 255, 365, 662, 785, 1133
FriOI GRGCYC 2 cut(s) 665, 1828
GlaI GCGC 3 cut(s) 283, 729, 1581
GsaI CCCAGC 1 cut(s) 522
GsuI CTGGAG 4 cut(s) 902, 1517, 1685, 1853
HaeII RGCGCY 1 cut(s) 731
HgaI GACGC 3 cut(s) 824, 929, 1418
HhaI GCGC 3 cut(s) 284, 730, 1582
Hin1I GRCGYC 2 cut(s) 816, 1410
Hin1II CATG 6 cut(s) 20, 475, 1288, 1481, 1644, 1771
Hin6I GCGC 3 cut(s) 282, 728, 1580
HinP1I GCGC 3 cut(s) 282, 728, 1580
HphI GGTGA 9 cut(s) 880, 917, 1067, 1114, 1151, 1304, 1477, 1577, 1664
Hpy166II GTNNAC 4 cut(s) 634, 908, 1110, 1399
Hpy188I TCNGA 9 cut(s) 76, 208, 226, 649, 1171, 1434, 1576, 1612, 1720
Hpy188III TCNNGA 7 cut(s) 26, 833, 881, 967, 1127, 1768, 1853
Hpy8I GTNNAC 4 cut(s) 634, 908, 1110, 1399
Hpy99I CGWCG 5 cut(s) 106, 230, 941, 962, 1180
HpyCH4III ACNGT 3 cut(s) 58, 340, 430
HpyCH4IV ACGT 4 cut(s) 936, 960, 1106, 1692
HpyCH4V TGCA 4 cut(s) 16, 287, 943, 1625
HpyF3I CTNAG 5 cut(s) 237, 1244, 1524, 1539, 1575
HpySE526I ACGT 4 cut(s) 936, 960, 1106, 1692
Hsp92I GRCGYC 2 cut(s) 816, 1410
Hsp92II CATG 6 cut(s) 20, 475, 1288, 1481, 1644, 1771
HspAI GCGC 3 cut(s) 282, 728, 1580
KpnI GGTACC 4 cut(s) 57, 151, 567, 998
LguI GCTCTTC 1 cut(s) 1716
LmnI GCTCC 7 cut(s) 304, 660, 720, 928, 1032, 1504, 1555
LweI GCATC 4 cut(s) 343, 766, 1093, 1368
MaeII ACGT 4 cut(s) 936, 960, 1106, 1692
MaeIII GTNAC 5 cut(s) 430, 463, 928, 1102, 1292
MbiI CCGCTC 1 cut(s) 1507
MfeI CAATTG 2 cut(s) 782, 864
MflI RGATCY 2 cut(s) 185, 1067
MhlI GDGCHC 3 cut(s) 665, 1387, 1828
MluCI AATT 7 cut(s) 20, 167, 534, 782, 864, 1772, 1814
MlyI GAGTC 5 cut(s) 230, 1181, 1505, 1601, 1637
MmeI TCCRAC 1 cut(s) 249
MroXI GAANNNNTTC 1 cut(s) 876
MseI TTAA 1 cut(s) 537
MslI CAYNNNNRTG 1 cut(s) 1089
MspA1I CMGCKG 4 cut(s) 323, 377, 556, 1240
MunI CAATTG 2 cut(s) 782, 864
Mva1269I GAATGC 1 cut(s) 392
MvaI CCWGG 9 cut(s) 82, 121, 806, 953, 1053, 1163, 1346, 1664, 1832
MvnI CGCG 3 cut(s) 258, 1553, 1582
NheI GCTAGC 1 cut(s) 1445
NlaIII CATG 6 cut(s) 20, 475, 1288, 1481, 1644, 1771
NmeAIII GCCGAG 1 cut(s) 182
NmuCI GTSAC 3 cut(s) 928, 1102, 1292
NspI RCATGY 1 cut(s) 475
PagI TCATGA 1 cut(s) 1767
PaqCI CACCTGC 1 cut(s) 1453
PceI AGGCCT 1 cut(s) 233
PciSI GCTCTTC 1 cut(s) 1716
PcsI WCGNNNNNNNCGW 1 cut(s) 1260
PctI GAATGC 1 cut(s) 392
PdmI GAANNNNTTC 1 cut(s) 876
PfeI GAWTC 8 cut(s) 71, 260, 293, 672, 1048, 1207, 1351, 1370
PfoI TCCNGGA 1 cut(s) 1830
PinAI ACCGGT 3 cut(s) 144, 560, 997
PleI GAGTC 5 cut(s) 229, 1180, 1505, 1601, 1636
PmaCI CACGTG 1 cut(s) 1693
PmlI CACGTG 1 cut(s) 1693
PpsI GAGTC 5 cut(s) 229, 1180, 1505, 1601, 1636
Ppu21I YACGTR 1 cut(s) 1693
PpuMI RGGWCCY 2 cut(s) 46, 1883
PshAI GACNNNNGTC 1 cut(s) 935
Psp124BI GAGCTC 1 cut(s) 665
Psp5II RGGWCCY 2 cut(s) 46, 1883
Psp6I CCWGG 9 cut(s) 80, 119, 804, 951, 1051, 1161, 1344, 1662, 1830
PspCI CACGTG 1 cut(s) 1693
PspEI GGTNACC 1 cut(s) 1292
PspFI CCCAGC 1 cut(s) 518
PspGI CCWGG 9 cut(s) 80, 119, 804, 951, 1051, 1161, 1344, 1662, 1830
PspPI GGNCC 8 cut(s) 46, 583, 802, 1000, 1281, 1326, 1862, 1883
PspPPI RGGWCCY 2 cut(s) 46, 1883
PstI CTGCAG 1 cut(s) 1627
PstNI CAGNNNCTG 3 cut(s) 344, 1243, 1631
PsuI RGATCY 2 cut(s) 185, 1067
PvuII CAGCTG 3 cut(s) 377, 556, 1240
RseI CAYNNNNRTG 1 cut(s) 1089
SacI GAGCTC 1 cut(s) 665
SapI GCTCTTC 1 cut(s) 1716
SaqAI TTAA 1 cut(s) 537
Sau96I GGNCC 8 cut(s) 46, 583, 802, 1000, 1281, 1326, 1862, 1883
SchI GAGTC 5 cut(s) 230, 1181, 1505, 1601, 1637
SduI GDGCHC 3 cut(s) 665, 1387, 1828
SfaNI GCATC 4 cut(s) 343, 766, 1093, 1368
SfcI CTRYAG 2 cut(s) 336, 1623
SinI GGWCC 5 cut(s) 46, 583, 1000, 1281, 1883
SmaI CCCGGG 4 cut(s) 271, 629, 1367, 1604
SmiMI CAYNNNNRTG 1 cut(s) 1089
SmlI CTYRAG 1 cut(s) 1559
SmoI CTYRAG 1 cut(s) 1559
SpeI ACTAGT 1 cut(s) 460
Sse9I AATT 7 cut(s) 20, 167, 534, 782, 864, 1772, 1814
SseBI AGGCCT 1 cut(s) 233
SstI GAGCTC 1 cut(s) 665
StuI AGGCCT 1 cut(s) 233
StyI CCWWGG 4 cut(s) 151, 305, 838, 1329
TaaI ACNGT 3 cut(s) 58, 340, 430
TaiI ACGT 4 cut(s) 939, 963, 1109, 1695
TaqI TCGA 8 cut(s) 141, 191, 482, 828, 834, 845, 1087, 1314
TaqII GACCGA 1 cut(s) 849
TasI AATT 7 cut(s) 20, 167, 534, 782, 864, 1772, 1814
TauI GCSGC 5 cut(s) 258, 443, 1538, 1793, 1901
TfiI GAWTC 8 cut(s) 71, 260, 293, 672, 1048, 1207, 1351, 1370
Tru1I TTAA 1 cut(s) 537
Tru9I TTAA 1 cut(s) 537
TscAI CASTG 3 cut(s) 985, 1033, 1117
TseFI GTSAC 3 cut(s) 928, 1102, 1292
Tsp45I GTSAC 3 cut(s) 928, 1102, 1292
TspDTI ATGAA 6 cut(s) 33, 664, 1281, 1466, 1784, 1821
TspMI CCCGGG 4 cut(s) 269, 627, 1365, 1602
TspRI CASTG 3 cut(s) 985, 1033, 1117
VpaK11BI GGWCC 5 cut(s) 46, 583, 1000, 1281, 1883
XapI RAATTY 3 cut(s) 20, 1772, 1814
XceI RCATGY 1 cut(s) 475
XmaI CCCGGG 4 cut(s) 269, 627, 1365, 1602
XmaJI CCTAGG 2 cut(s) 151, 838
XmiI GTMKAC 1 cut(s) 633
XmnI GAANNNNTTC 1 cut(s) 876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.