Rmu_sc0001382.1_g000007

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001382.1
OG0000087
Physical Location & Seq
Reverse (-)
16707 .. 17909
1203 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001382.1_g000007.1.cds

Sequence Viewer

Length: 1122 bp
atgctgaatctgtcaccggggcagctaaccccgaatgccgttcgccaaatatatagtatgatggccatgtgggacctgtgccagcaagggtggcattccataaatgagttccgcgcggtacaccgggtactgtactctaggaagcagtcttgtgcgggtacggtgacctttgtcgctagggattacgagccgctagttaccgatatgcctacctcgatgagcaaaaggtggagaaacaaagtgttcctagctggtgggcggtggcagataaaaaataagaagtggcagctgaccggtactttccaagctatcggggaccagtcctatatgctatccgaagtagaaaagaagaggatagcccgagtatatgccgtgtggtcagagaaagagaggagctcttataggttcatccggcacactatactttttaggctagggttagggtggctccccgtgaaagccccgaagaggaaaccccggaaaggcaaggaggaggacaggatggatgatgctcaactgatggacatgctgatgagccagggggaagatgccctgcacatcaacgtcgacctagggtcgaaaagcacgagtcggtctatcgaagagacccttttggagataaccgatgagggatacggtgaacctgatcccgacgctcctgtgacccacgccgtgcagccctccatggccgatgtcattacgatagctgaccccggggtgggaaaagtaccggccccagtgcctatttcgtctcgttccactgggagcgatgaggtgttactccccggtgagaagaagagatcccacaagcaccggcatcgaacctataaggaggtgacgtacactggccgggatgtccagggtactggtgcgaagaggcagaacaaagatcacccgggatcagggtcgtcgtcttctcttggcctgttatctcccgccgttccggtaatccccaagaagcccatcaagcagctgctgaatgaatacggggttgccgatgaaaagttcgtgttgtccatgcttggggatctgaaggatattgacctcgaccgggttcgagccaaagataatactccccaggagaatcgtcgtcttgcccgggaatcaatgatgcgggtatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

373

Amino Acids

42.13

Weight (kDa)

9.57

Isoelectric Point (pI)

56.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 567
AccII CGCG 2 cut(s) 114, 116
AciI CCGC 7 cut(s) 112, 116, 155, 191, 259, 936, 1114
AclWI GGATC 4 cut(s) 641, 795, 907, 1035
AcoI YGGCCR 3 cut(s) 63, 687, 847
AcuI CTGAAG 1 cut(s) 1052
AdeI CACNNNGTG 1 cut(s) 673
AfaI GTAC 8 cut(s) 120, 129, 134, 160, 298, 729, 842, 865
AfiI CCNNNNNNNGG 7 cut(s) 468, 482, 718, 719, 902, 1023, 1051
AgeI ACCGGT 1 cut(s) 293
AhdI GACNNNNNGTC 1 cut(s) 574
AjnI CCWGG 3 cut(s) 537, 858, 1077
AluBI AGCT 7 cut(s) 25, 251, 289, 308, 396, 707, 973
AluI AGCT 7 cut(s) 25, 251, 289, 308, 396, 707, 973
Alw21I GWGCWC 1 cut(s) 398
Alw26I GTCTC 2 cut(s) 599, 756
AlwI GGATC 4 cut(s) 641, 795, 907, 1035
AlwNI CAGNNNCTG 1 cut(s) 976
Ama87I CYCGRG 4 cut(s) 360, 713, 895, 1098
AoxI GGCC 5 cut(s) 63, 687, 732, 847, 922
ApeKI GCWGC 5 cut(s) 22, 286, 676, 970, 973
AsiGI ACCGGT 1 cut(s) 293
AspA2I CCTAGG 1 cut(s) 571
AspLEI GCGC 1 cut(s) 116
AspS9I GGNCC 3 cut(s) 73, 316, 733
AsuHPI GGTGA 6 cut(s) 6, 175, 650, 800, 847, 884
AvaI CYCGRG 4 cut(s) 360, 713, 895, 1098
AvaII GGWCC 2 cut(s) 73, 316
AvrII CCTAGG 1 cut(s) 571
BalI TGGCCA 1 cut(s) 65
BanII GRGCYC 1 cut(s) 398
BauI CACGAG 1 cut(s) 586
BbsI GAAGAC 1 cut(s) 906
Bbv12I GWGCWC 1 cut(s) 398
BbvI GCAGC 5 cut(s) 34, 298, 688, 960, 982
BccI CCATC 4 cut(s) 55, 496, 514, 971
BceAI ACGGC 4 cut(s) 23, 356, 656, 923
BcgI CGANNNNNNTGC 2 cut(s) 800, 834
BciT130I CCWGG 3 cut(s) 539, 860, 1079
BciVI GTATCC 1 cut(s) 626
BcoDI GTCTC 2 cut(s) 599, 756
BfaI CTAG 6 cut(s) 138, 177, 194, 248, 434, 572
BfuI GTATCC 1 cut(s) 626
BisI GCNGC 6 cut(s) 23, 191, 287, 677, 971, 974
BlnI CCTAGG 1 cut(s) 571
BlsI GCNGC 6 cut(s) 24, 192, 288, 678, 972, 975
Bme18I GGWCC 2 cut(s) 73, 316
BmeRI GACNNNNNGTC 1 cut(s) 574
BmeT110I CYCGRG 4 cut(s) 360, 713, 895, 1098
BmgT120I GGNCC 3 cut(s) 73, 316, 733
BmiI GGNNCC 4 cut(s) 74, 317, 449, 735
BmrI ACTGGG 2 cut(s) 731, 771
BmsI GCATC 4 cut(s) 499, 538, 826, 1101
BmuI ACTGGG 2 cut(s) 731, 771
BoxI GACNNNNGTC 1 cut(s) 170
BpiI GAAGAC 1 cut(s) 906
BplI GAGNNNNNCTC 2 cut(s) 380, 412
BsaI GGTCTC 1 cut(s) 599
BsaWI WCCGGW 2 cut(s) 293, 943
BsaXI ACNNNNNCTCC 2 cut(s) 824, 854
Bsc4I CCNNNNNNNGG 7 cut(s) 468, 482, 718, 719, 902, 1023, 1051
Bse118I RCCGGY 3 cut(s) 293, 730, 813
Bse1I ACTGG 5 cut(s) 319, 737, 766, 850, 871
BseBI CCWGG 3 cut(s) 539, 860, 1079
BseGI GGATG 4 cut(s) 408, 507, 511, 859
BseLI CCNNNNNNNGG 7 cut(s) 468, 482, 718, 719, 902, 1023, 1051
BseNI ACTGG 5 cut(s) 319, 737, 766, 850, 871
BseRI GAGGAG 2 cut(s) 406, 506
BseXI GCAGC 5 cut(s) 34, 298, 688, 960, 982
BsgI GTGCAG 2 cut(s) 539, 695
Bsh1236I CGCG 2 cut(s) 114, 116
Bsh1285I CGRYCG 1 cut(s) 1051
BshFI GGCC 5 cut(s) 65, 689, 734, 849, 924
BshTI ACCGGT 1 cut(s) 293
BsiEI CGRYCG 1 cut(s) 1051
BsiHKAI GWGCWC 1 cut(s) 398
BsiHKCI CYCGRG 4 cut(s) 360, 713, 895, 1098
BslFI GGGAC 2 cut(s) 86, 329
BslI CCNNNNNNNGG 7 cut(s) 468, 482, 718, 719, 902, 1023, 1051
BsmAI GTCTC 2 cut(s) 599, 756
BsmBI CGTCTC 1 cut(s) 756
BsmFI GGGAC 2 cut(s) 86, 329
BsmI GAATGC 2 cut(s) 40, 94
BsnI GGCC 5 cut(s) 65, 689, 734, 849, 924
Bso31I GGTCTC 1 cut(s) 599
BsoBI CYCGRG 4 cut(s) 360, 713, 895, 1098
Bsp1286I GDGCHC 1 cut(s) 398
Bsp143I GATC 5 cut(s) 646, 800, 889, 899, 1027
Bsp19I CCATGG 1 cut(s) 684
BspACI CCGC 7 cut(s) 112, 116, 155, 191, 259, 936, 1114
BspANI GGCC 5 cut(s) 65, 689, 734, 849, 924
BspFNI CGCG 2 cut(s) 114, 116
BspLI GGNNCC 4 cut(s) 74, 317, 449, 735
BspPI GGATC 4 cut(s) 641, 795, 907, 1035
BspTNI GGTCTC 1 cut(s) 599
BsrFI RCCGGY 3 cut(s) 293, 730, 813
BsrI ACTGG 5 cut(s) 319, 737, 766, 850, 871
BssAI RCCGGY 3 cut(s) 293, 730, 813
BssMI GATC 5 cut(s) 646, 800, 889, 899, 1027
BssSI CACGAG 1 cut(s) 586
BssT1I CCWWGG 2 cut(s) 571, 684
Bst2BI CACGAG 1 cut(s) 586
Bst2UI CCWGG 3 cut(s) 539, 860, 1079
Bst4CI ACNGT 3 cut(s) 132, 163, 638
Bst6I CTCTTC 5 cut(s) 344, 461, 597, 791, 869
BstC8I GCNNGC 1 cut(s) 83
BstDSI CCRYGG 1 cut(s) 684
BstEII GGTNACC 1 cut(s) 163
BstF5I GGATG 4 cut(s) 408, 507, 511, 859
BstFNI CGCG 2 cut(s) 114, 116
BstHHI GCGC 1 cut(s) 116
BstKTI GATC 5 cut(s) 649, 803, 892, 902, 1030
BstMAI GTCTC 2 cut(s) 599, 756
BstMBI GATC 5 cut(s) 646, 800, 889, 899, 1027
BstMCI CGRYCG 1 cut(s) 1051
BstMWI GCNNNNNNNGC 2 cut(s) 91, 967
BstNI CCWGG 3 cut(s) 539, 860, 1079
BstNSI RCATGY 1 cut(s) 529
BstPAI GACNNNNGTC 1 cut(s) 170
BstPI GGTNACC 1 cut(s) 163
BstUI CGCG 2 cut(s) 114, 116
BstV1I GCAGC 5 cut(s) 34, 298, 688, 960, 982
BstV2I GAAGAC 1 cut(s) 906
BstX2I RGATCY 2 cut(s) 800, 1027
BstXI CCANNNNNNTGG 1 cut(s) 866
BstYI RGATCY 2 cut(s) 800, 1027
BsuI GTATCC 1 cut(s) 626
BsuRI GGCC 5 cut(s) 65, 689, 734, 849, 924
BtgI CCRYGG 1 cut(s) 684
BtgZI GCGATG 1 cut(s) 783
BtsCI GGATG 4 cut(s) 408, 507, 511, 859
BtsIMutI CAGTG 3 cut(s) 744, 759, 843
Cac8I GCNNGC 1 cut(s) 83
CaiI CAGNNNCTG 1 cut(s) 976
CfoI GCGC 1 cut(s) 116
Cfr10I RCCGGY 3 cut(s) 293, 730, 813
Cfr13I GGNCC 3 cut(s) 73, 316, 733
Cfr9I CCCGGG 3 cut(s) 713, 895, 1098
CseI GACGC 1 cut(s) 662
Csp6I GTAC 8 cut(s) 119, 128, 133, 159, 297, 728, 841, 864
CspAI ACCGGT 1 cut(s) 293
CviAII CATG 4 cut(s) 67, 526, 685, 1018
CviQI GTAC 8 cut(s) 119, 128, 133, 159, 297, 728, 841, 864
DpnI GATC 5 cut(s) 648, 802, 891, 901, 1029
DpnII GATC 5 cut(s) 646, 800, 889, 899, 1027
DraIII CACNNNGTG 1 cut(s) 673
DriI GACNNNNNGTC 1 cut(s) 574
EaeI YGGCCR 3 cut(s) 63, 687, 847
Eam1104I CTCTTC 5 cut(s) 344, 461, 597, 791, 869
Eam1105I GACNNNNNGTC 1 cut(s) 574
EarI CTCTTC 5 cut(s) 344, 461, 597, 791, 869
Ecl136II GAGCTC 1 cut(s) 396
Eco130I CCWWGG 2 cut(s) 571, 684
Eco24I GRGCYC 1 cut(s) 398
Eco31I GGTCTC 1 cut(s) 599
Eco47I GGWCC 2 cut(s) 73, 316
Eco53kI GAGCTC 1 cut(s) 396
Eco57I CTGAAG 1 cut(s) 1052
Eco88I CYCGRG 4 cut(s) 360, 713, 895, 1098
Eco91I GGTNACC 1 cut(s) 163
EcoICRI GAGCTC 1 cut(s) 396
EcoO109I RGGNCCY 1 cut(s) 73
EcoO65I GGTNACC 1 cut(s) 163
EcoRII CCWGG 3 cut(s) 537, 858, 1077
EcoT14I CCWWGG 2 cut(s) 571, 684
EcoT38I GRGCYC 1 cut(s) 398
ErhI CCWWGG 2 cut(s) 571, 684
Esp3I CGTCTC 1 cut(s) 756
FaeI CATG 4 cut(s) 70, 529, 688, 1021
FalI AAGNNNNNCTT 2 cut(s) 594, 626
FaqI GGGAC 2 cut(s) 86, 329
FatI CATG 4 cut(s) 66, 525, 684, 1017
FauI CCCGC 3 cut(s) 148, 943, 1107
FblI GTMKAC 1 cut(s) 567
Fnu4HI GCNGC 6 cut(s) 23, 191, 287, 677, 971, 974
FokI GGATG 4 cut(s) 395, 514, 518, 866
FriOI GRGCYC 1 cut(s) 398
Fsp4HI GCNGC 6 cut(s) 23, 191, 287, 677, 971, 974
FspBI CTAG 6 cut(s) 138, 177, 194, 248, 434, 572
GlaI GCGC 1 cut(s) 115
GluI GCNGC 6 cut(s) 23, 191, 287, 677, 971, 974
HaeIII GGCC 5 cut(s) 65, 689, 734, 849, 924
HgaI GACGC 1 cut(s) 662
HhaI GCGC 1 cut(s) 116
Hin1II CATG 4 cut(s) 70, 529, 688, 1021
Hin6I GCGC 1 cut(s) 114
HinP1I GCGC 1 cut(s) 114
HincII GTYRAC 1 cut(s) 568
HindII GTYRAC 1 cut(s) 568
HinfI GANTC 4 cut(s) 7, 589, 1084, 1103
HphI GGTGA 6 cut(s) 6, 175, 650, 800, 847, 884
Hpy166II GTNNAC 4 cut(s) 121, 568, 641, 843
Hpy188I TCNGA 3 cut(s) 337, 382, 1032
Hpy188III TCNNGA 1 cut(s) 650
Hpy8I GTNNAC 4 cut(s) 121, 568, 641, 843
Hpy99I CGWCG 4 cut(s) 569, 656, 913, 1092
HpyAV CCTTC 1 cut(s) 1027
HpyCH4III ACNGT 3 cut(s) 132, 163, 638
HpyCH4IV ACGT 2 cut(s) 564, 839
HpyCH4V TGCA 2 cut(s) 556, 676
HpyF10VI GCNNNNNNNGC 2 cut(s) 91, 967
HpySE526I ACGT 2 cut(s) 564, 839
Hsp92II CATG 4 cut(s) 70, 529, 688, 1021
HspAI GCGC 1 cut(s) 114
Kzo9I GATC 5 cut(s) 646, 800, 889, 899, 1027
LmnI GCTCC 4 cut(s) 393, 453, 661, 765
Lsp1109I GCAGC 5 cut(s) 34, 298, 688, 960, 982
LweI GCATC 4 cut(s) 499, 538, 826, 1101
MaeI CTAG 6 cut(s) 138, 177, 194, 248, 434, 572
MaeII ACGT 2 cut(s) 564, 839
MaeIII GTNAC 6 cut(s) 12, 163, 196, 661, 777, 835
MalI GATC 5 cut(s) 648, 802, 891, 901, 1029
MboI GATC 5 cut(s) 646, 800, 889, 899, 1027
MboII GAAGA 8 cut(s) 361, 478, 557, 614, 805, 808, 886, 906
MflI RGATCY 2 cut(s) 800, 1027
MhlI GDGCHC 1 cut(s) 398
MlsI TGGCCA 1 cut(s) 65
MluNI TGGCCA 1 cut(s) 65
MlyI GAGTC 1 cut(s) 598
Mox20I TGGCCA 1 cut(s) 65
MscI TGGCCA 1 cut(s) 65
MslI CAYNNNNRTG 1 cut(s) 530
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 2 cut(s) 289, 973
Mva1269I GAATGC 2 cut(s) 40, 94
MvaI CCWGG 3 cut(s) 539, 860, 1079
MvnI CGCG 2 cut(s) 114, 116
MwoI GCNNNNNNNGC 2 cut(s) 91, 967
NcoI CCATGG 1 cut(s) 684
NdeII GATC 5 cut(s) 646, 800, 889, 899, 1027
NlaIII CATG 4 cut(s) 70, 529, 688, 1021
NlaIV GGNNCC 4 cut(s) 74, 317, 449, 735
NmuCI GTSAC 4 cut(s) 12, 163, 661, 835
NspI RCATGY 1 cut(s) 529
PcsI WCGNNNNNNNCGW 2 cut(s) 584, 993
PctI GAATGC 2 cut(s) 40, 94
PfeI GAWTC 3 cut(s) 7, 1084, 1103
PinAI ACCGGT 1 cut(s) 293
PkrI GCNGC 6 cut(s) 24, 192, 288, 678, 972, 975
PleI GAGTC 1 cut(s) 597
PpsI GAGTC 1 cut(s) 597
PpuMI RGGWCCY 1 cut(s) 73
PshAI GACNNNNGTC 1 cut(s) 170
Psp124BI GAGCTC 1 cut(s) 398
Psp5II RGGWCCY 1 cut(s) 73
Psp6I CCWGG 3 cut(s) 537, 858, 1077
PspEI GGTNACC 1 cut(s) 163
PspGI CCWGG 3 cut(s) 537, 858, 1077
PspN4I GGNNCC 4 cut(s) 74, 317, 449, 735
PspPI GGNCC 3 cut(s) 73, 316, 733
PspPPI RGGWCCY 1 cut(s) 73
PstNI CAGNNNCTG 1 cut(s) 976
PsuI RGATCY 2 cut(s) 800, 1027
PvuII CAGCTG 2 cut(s) 289, 973
RsaI GTAC 8 cut(s) 120, 129, 134, 160, 298, 729, 842, 865
RsaNI GTAC 8 cut(s) 119, 128, 133, 159, 297, 728, 841, 864
RseI CAYNNNNRTG 1 cut(s) 530
SacI GAGCTC 1 cut(s) 398
SalI GTCGAC 1 cut(s) 566
SatI GCNGC 6 cut(s) 23, 191, 287, 677, 971, 974
Sau3AI GATC 5 cut(s) 646, 800, 889, 899, 1027
Sau96I GGNCC 3 cut(s) 73, 316, 733
SchI GAGTC 1 cut(s) 598
SduI GDGCHC 1 cut(s) 398
SfaNI GCATC 4 cut(s) 499, 538, 826, 1101
SinI GGWCC 2 cut(s) 73, 316
SmaI CCCGGG 3 cut(s) 715, 897, 1100
SmiMI CAYNNNNRTG 1 cut(s) 530
SsiI CCGC 7 cut(s) 112, 116, 155, 191, 259, 936, 1114
SspMI CTAG 6 cut(s) 138, 177, 194, 248, 434, 572
SstI GAGCTC 1 cut(s) 398
StyI CCWWGG 2 cut(s) 571, 684
TaaI ACNGT 3 cut(s) 132, 163, 638
TaiI ACGT 2 cut(s) 567, 842
TaqI TCGA 7 cut(s) 215, 567, 578, 600, 820, 1047, 1057
TaqII GACCGA 1 cut(s) 582
TatI WGTACW 1 cut(s) 132
TauI GCSGC 1 cut(s) 193
TfiI GAWTC 3 cut(s) 7, 1084, 1103
TscAI CASTG 3 cut(s) 744, 766, 850
TseFI GTSAC 4 cut(s) 12, 163, 661, 835
TseI GCWGC 5 cut(s) 22, 286, 676, 970, 973
Tsp45I GTSAC 4 cut(s) 12, 163, 661, 835
TspDTI ATGAA 3 cut(s) 397, 996, 1014
TspMI CCCGGG 3 cut(s) 713, 895, 1098
TspRI CASTG 3 cut(s) 744, 766, 850
VpaK11BI GGWCC 2 cut(s) 73, 316
XceI RCATGY 1 cut(s) 529
XmaI CCCGGG 3 cut(s) 713, 895, 1098
XmaJI CCTAGG 1 cut(s) 571
XmiI GTMKAC 1 cut(s) 567
XspI CTAG 6 cut(s) 138, 177, 194, 248, 434, 572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.