Rmu_sc0000279.1_g000008

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000279.1
OG0000087
Physical Location & Seq
Reverse (-)
36730 .. 38985
2256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000279.1_g000008.1.cds

Sequence Viewer

Length: 2085 bp
atggaatcagaagccaggggtggggatacgggatcgtcgtaccagttctctgccaggcgagctgaaatggacatcgaccgatacctaggccgggtagaccaattagcggagaacacggggtcctcaactggggtgttctcggagagtagtggggagtcagacgagggggagagcgagggtggatctgcggaggccccggtagttacagtggccattcccgagggcattccgaagccgaggtacacacttgcggacgggactgtatgcgacgaacctgggagaagcatgacggtgaaggagatcgtagacatgccgctgaagtgggggataccggactcagtagagcttaggcctcttagggatggggagatggccgcaaatcctgcctcggggtgggtggcgctggacgagaatcagctccaccaagggttatcgctacccctgccccggtgcctacagtatctgctgcggatgctgaacctgtcaccggggcagctaaccccgaatgccgttcgccaaatatacagaatgatggccatgtgggacctgtgccagcaagggtggccttccataaatgagttccgcgcggtacaccgggtactgtattctaggaaaaggtcttgtgcgggtacggtgacttttgccactagggattacgagccgctagttaccgatatgactacctcgatgagcaaaaggtggaggaacaaagtgtttctagctggtgggcggtggcagataaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatacactatccgaagtagaaaagaagaggatagcccgggtatatgccgtgtggtcagagaaagagaggagctcttataggttcatccggcactctatactttttaggctagggttagggtggctccccgtgaaagccccgaagaggaaaccccggaaaggcaaggaggaggacaggatggatgatgctcaattaatggacatgctgatgagccagggagaagatgccctgcacatcgacataaacctagggtcgaaaggcacgagtcggtctatcgaagaggccctgttggagataaccgatgagggatacggtgaacctgatcccgacgcccctgtgacccactccgcccagccctccatggccgatgtcattacgatagctgacaccggggtgggaaaagtaccggcctcagtgcccatttcctctcgttccactgggagcgatgagttattactccccggtgagaagaagagatcccacaagcacctgcatcgaaccgataaggaggtgacgtacactggccgggatgtccagggtaccggtgcgaagaggcagaagaaagatcacccgggatcagggccgtcgccctctcttggtctgttatctcccgctgttccggtaatccccaaggagcccatcaagcagctgctgaatgaaaacggggttgccgatgaaaaattcgtccggtctatgcttgggaatctgaaggatattgacctcgaccgggtccgagccaaagataatactccccaggagaatcgccgtctcgcccgggagcactcttcaatgtgtacgccatatatcgacgccagcgaggaagatactcatctgaaggaggaggttagcaacctctccgggcaggtgaagtaccttcatggcgagaaggccaagctggagaaggagcgggactcattgagggctgagatggccacctctaagcagcggattgaggagcttgagggtgaggttgctgaggcgcgggaggaggtcaagaacgcccgggactccaaaaaaaaggctgcagagtctgccgtctcatggaaggagaaggcagactctctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcagatgagcttatcgctatgctggctgctgcccaagataaggctgtcatcaagaagtttaaggagtgggtggcggccgggtacttagatgaagccaagtttaggcggggtctcctggagaagaggaagaaggagcgggaggcggcggccaagtctggtgcaggtgggtcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

694

Amino Acids

77.22

Weight (kDa)

6.43

Isoelectric Point (pI)

45.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 1293, 1648, 2063
Acc36I ACCTGC 3 cut(s) 1293, 1648, 2063
Acc65I GGTACC 2 cut(s) 767, 1334
AccB1I GGYRCC 3 cut(s) 450, 767, 1334
AccBSI CCGCTC 2 cut(s) 1702, 2047
AccI GTMKAC 2 cut(s) 96, 306
AccII CGCG 4 cut(s) 585, 587, 1777, 1877
AclWI GGATC 6 cut(s) 40, 190, 1112, 1266, 1378, 1872
AcoI YGGCCR 8 cut(s) 210, 372, 534, 1158, 1318, 1725, 1986, 2058
AcsI RAATTY 1 cut(s) 1475
AcuI CTGAAG 3 cut(s) 338, 1523, 1649
AcyI GRCGYC 2 cut(s) 1125, 1605
AgeI ACCGGT 2 cut(s) 764, 1337
AgsI TTSAA 1 cut(s) 1584
AjnI CCWGG 7 cut(s) 14, 53, 274, 1008, 1329, 1548, 2025
AleI CACNNNNGTG 1 cut(s) 1187
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
Alw21I GWGCWC 2 cut(s) 869, 1578
Alw26I GTCTC 3 cut(s) 1568, 1837, 2027
AlwI GGATC 6 cut(s) 40, 190, 1112, 1266, 1378, 1872
AlwNI CAGNNNCTG 3 cut(s) 463, 1447, 1826
Ama87I CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1797
ApeKI GCWGC 9 cut(s) 466, 493, 757, 1441, 1444, 1738, 1817, 1937, 1940
ApoI RAATTY 1 cut(s) 1475
AseI ATTAAT 1 cut(s) 989
AsiGI ACCGGT 2 cut(s) 764, 1337
Asp718I GGTACC 2 cut(s) 767, 1334
AspA2I CCTAGG 2 cut(s) 85, 1042
AspLEI GCGC 3 cut(s) 403, 587, 1777
AspS9I GGNCC 7 cut(s) 120, 193, 544, 787, 1078, 1376, 1525
AsuHPI GGTGA 9 cut(s) 304, 477, 646, 1121, 1271, 1318, 1355, 1672, 1772
AvaI CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1797
AvaII GGWCC 4 cut(s) 120, 544, 787, 1525
AvrII CCTAGG 2 cut(s) 85, 1042
BaeGI GKGCMC 1 cut(s) 1215
BalI TGGCCA 3 cut(s) 212, 536, 1727
BanI GGYRCC 3 cut(s) 450, 767, 1334
BanII GRGCYC 2 cut(s) 869, 1434
BarI GAAGNNNNNNTAC 2 cut(s) 224, 256
BauI CACGAG 2 cut(s) 1057, 1886
Bbv12I GWGCWC 2 cut(s) 869, 1578
BbvCI CCTCAGC 1 cut(s) 1770
BbvI GCAGC 9 cut(s) 453, 505, 769, 1431, 1453, 1750, 1804, 1924, 1927
BccI CCATC 6 cut(s) 356, 364, 526, 967, 1442, 1717
BceAI ACGGC 6 cut(s) 494, 827, 1363, 1545, 1814, 1877
BcgI CGANNNNNNTGC 2 cut(s) 1271, 1305
BciT130I CCWGG 7 cut(s) 16, 55, 276, 1010, 1331, 1550, 2027
BciVI GTATCC 3 cut(s) 19, 321, 1097
BcoDI GTCTC 3 cut(s) 1568, 1837, 2027
BfaI CTAG 7 cut(s) 86, 609, 648, 665, 719, 905, 1043
BfmI CTRYAG 2 cut(s) 455, 1818
BfoI RGCGCY 1 cut(s) 404
BfuAI ACCTGC 3 cut(s) 1293, 1648, 2063
BfuI GTATCC 3 cut(s) 19, 321, 1097
BlnI CCTAGG 2 cut(s) 85, 1042
Bme18I GGWCC 4 cut(s) 120, 544, 787, 1525
BmeT110I CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1797
BmgT120I GGNCC 7 cut(s) 120, 193, 544, 787, 1078, 1376, 1525
BmrI ACTGGG 2 cut(s) 138, 1242
BmsI GCATC 4 cut(s) 462, 970, 1009, 1297
BmuI ACTGGG 2 cut(s) 138, 1242
BplI GAGNNNNNCTC 4 cut(s) 851, 883, 1691, 1723
BpmI CTGGAG 3 cut(s) 1712, 1880, 2048
Bpu10I CCTNAGC 2 cut(s) 347, 1770
BpuEI CTTGAG 1 cut(s) 1775
BsaBI GATNNNNATC 1 cut(s) 1623
BsaHI GRCGYC 2 cut(s) 1125, 1605
BsaI GGTCTC 1 cut(s) 2027
BsaWI WCCGGW 5 cut(s) 331, 764, 1337, 1414, 1482
BsaXI ACNNNNNCTCC 4 cut(s) 1295, 1325, 1892, 1922
Bse118I RCCGGY 3 cut(s) 764, 1201, 1337
Bse1I ACTGG 5 cut(s) 43, 133, 790, 1237, 1321
Bse8I GATNNNNATC 1 cut(s) 1623
BseBI CCWGG 7 cut(s) 16, 55, 276, 1010, 1331, 1550, 2027
BseGI GGATG 6 cut(s) 367, 477, 879, 978, 982, 1330
BseJI GATNNNNATC 1 cut(s) 1623
BseMII CTCAG 5 cut(s) 351, 1221, 1710, 1761, 1926
BseNI ACTGG 5 cut(s) 43, 133, 790, 1237, 1321
BseRI GAGGAG 6 cut(s) 877, 977, 1649, 1763, 1796, 1913
BseSI GKGCMC 1 cut(s) 1215
BseX3I CGGCCG 1 cut(s) 1986
BseXI GCAGC 9 cut(s) 453, 505, 769, 1431, 1453, 1750, 1804, 1924, 1927
BseYI CCCAGC 1 cut(s) 1146
BsgI GTGCAG 1 cut(s) 1010
Bsh1236I CGCG 4 cut(s) 585, 587, 1777, 1877
Bsh1285I CGRYCG 3 cut(s) 79, 1522, 1989
BshNI GGYRCC 3 cut(s) 450, 767, 1334
BshTI ACCGGT 2 cut(s) 764, 1337
BsiEI CGRYCG 3 cut(s) 79, 1522, 1989
BsiHKAI GWGCWC 2 cut(s) 869, 1578
BsiHKCI CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1797
BslFI GGGAC 5 cut(s) 271, 557, 800, 1718, 1814
BsmAI GTCTC 3 cut(s) 1568, 1837, 2027
BsmBI CGTCTC 2 cut(s) 1568, 1837
BsmFI GGGAC 5 cut(s) 271, 557, 800, 1718, 1814
BsmI GAATGC 2 cut(s) 225, 511
Bso31I GGTCTC 1 cut(s) 2027
BsoBI CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1797
Bsp1286I GDGCHC 4 cut(s) 869, 1215, 1434, 1578
Bsp143I GATC 8 cut(s) 32, 182, 300, 1117, 1271, 1360, 1370, 1864
Bsp19I CCATGG 1 cut(s) 1155
BspCNI CTCAG 5 cut(s) 350, 1220, 1711, 1762, 1925
BspFNI CGCG 4 cut(s) 585, 587, 1777, 1877
BspMAI CTGCAG 1 cut(s) 1822
BspMI ACCTGC 3 cut(s) 1293, 1648, 2063
BspPI GGATC 6 cut(s) 40, 190, 1112, 1266, 1378, 1872
BspT107I GGYRCC 3 cut(s) 450, 767, 1334
BspTNI GGTCTC 1 cut(s) 2027
BsrBI CCGCTC 2 cut(s) 1702, 2047
BsrFI RCCGGY 3 cut(s) 764, 1201, 1337
BsrI ACTGG 5 cut(s) 43, 133, 790, 1237, 1321
BssAI RCCGGY 3 cut(s) 764, 1201, 1337
BssMI GATC 8 cut(s) 32, 182, 300, 1117, 1271, 1360, 1370, 1864
BssNI GRCGYC 2 cut(s) 1125, 1605
BssSI CACGAG 2 cut(s) 1057, 1886
BssT1I CCWWGG 5 cut(s) 85, 424, 1042, 1155, 1425
Bst2BI CACGAG 2 cut(s) 1057, 1886
Bst2UI CCWGG 7 cut(s) 16, 55, 276, 1010, 1331, 1550, 2027
Bst4CI ACNGT 7 cut(s) 208, 262, 292, 459, 603, 634, 1109
Bst6I CTCTTC 7 cut(s) 815, 932, 1068, 1262, 1340, 1585, 2027
BstACI GRCGYC 2 cut(s) 1125, 1605
BstAPI GCANNNNNTGC 2 cut(s) 383, 1826
BstC8I GCNNGC 4 cut(s) 60, 554, 1609, 1935
BstDSI CCRYGG 3 cut(s) 1155, 1875, 1893
BstF5I GGATG 6 cut(s) 367, 477, 879, 978, 982, 1330
BstFNI CGCG 4 cut(s) 585, 587, 1777, 1877
BstH2I RGCGCY 1 cut(s) 404
BstHHI GCGC 3 cut(s) 403, 587, 1777
BstKTI GATC 8 cut(s) 35, 185, 303, 1120, 1274, 1363, 1373, 1867
BstMAI GTCTC 3 cut(s) 1568, 1837, 2027
BstMBI GATC 8 cut(s) 32, 182, 300, 1117, 1271, 1360, 1370, 1864
BstMCI CGRYCG 3 cut(s) 79, 1522, 1989
BstMWI GCNNNNNNNGC 9 cut(s) 59, 383, 442, 472, 562, 1438, 1724, 1826, 1934
BstNI CCWGG 7 cut(s) 16, 55, 276, 1010, 1331, 1550, 2027
BstNSI RCATGY 2 cut(s) 313, 1000
BstSFI CTRYAG 2 cut(s) 455, 1818
BstSLI GKGCMC 1 cut(s) 1215
BstUI CGCG 4 cut(s) 585, 587, 1777, 1877
BstV1I GCAGC 9 cut(s) 453, 505, 769, 1431, 1453, 1750, 1804, 1924, 1927
BstX2I RGATCY 2 cut(s) 182, 1271
BstYI RGATCY 2 cut(s) 182, 1271
BstZI CGGCCG 1 cut(s) 1986
BsuI GTATCC 3 cut(s) 19, 321, 1097
BtgI CCRYGG 3 cut(s) 1155, 1875, 1893
BtgZI GCGATG 1 cut(s) 1254
BtsCI GGATG 6 cut(s) 367, 477, 879, 978, 982, 1330
BtsIMutI CAGTG 4 cut(s) 213, 1215, 1230, 1314
BveI ACCTGC 3 cut(s) 1293, 1648, 2063
Cac8I GCNNGC 4 cut(s) 60, 554, 1609, 1935
CaiI CAGNNNCTG 3 cut(s) 463, 1447, 1826
CfoI GCGC 3 cut(s) 403, 587, 1777
Cfr10I RCCGGY 3 cut(s) 764, 1201, 1337
Cfr13I GGNCC 7 cut(s) 120, 193, 544, 787, 1078, 1376, 1525
Cfr42I CCGCGG 1 cut(s) 1878
Cfr9I CCCGGG 4 cut(s) 831, 1366, 1569, 1797
CseI GACGC 2 cut(s) 1133, 1613
CspAI ACCGGT 2 cut(s) 764, 1337
CviAII CATG 7 cut(s) 286, 310, 538, 997, 1156, 1673, 1836
DpnI GATC 8 cut(s) 34, 184, 302, 1119, 1273, 1362, 1372, 1866
DpnII GATC 8 cut(s) 32, 182, 300, 1117, 1271, 1360, 1370, 1864
EaeI YGGCCR 8 cut(s) 210, 372, 534, 1158, 1318, 1725, 1986, 2058
EagI CGGCCG 1 cut(s) 1986
Eam1104I CTCTTC 7 cut(s) 815, 932, 1068, 1262, 1340, 1585, 2027
EarI CTCTTC 7 cut(s) 815, 932, 1068, 1262, 1340, 1585, 2027
EciI GGCGGA 1 cut(s) 1132
Ecl136II GAGCTC 1 cut(s) 867
EclXI CGGCCG 1 cut(s) 1986
Eco130I CCWWGG 5 cut(s) 85, 424, 1042, 1155, 1425
Eco147I AGGCCT 1 cut(s) 352
Eco24I GRGCYC 2 cut(s) 869, 1434
Eco31I GGTCTC 1 cut(s) 2027
Eco47I GGWCC 4 cut(s) 120, 544, 787, 1525
Eco52I CGGCCG 1 cut(s) 1986
Eco53kI GAGCTC 1 cut(s) 867
Eco57I CTGAAG 3 cut(s) 338, 1523, 1649
Eco88I CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1797
EcoICRI GAGCTC 1 cut(s) 867
EcoO109I RGGNCCY 4 cut(s) 120, 193, 544, 1078
EcoRII CCWGG 7 cut(s) 14, 53, 274, 1008, 1329, 1548, 2025
EcoT14I CCWWGG 5 cut(s) 85, 424, 1042, 1155, 1425
EcoT38I GRGCYC 2 cut(s) 869, 1434
ErhI CCWWGG 5 cut(s) 85, 424, 1042, 1155, 1425
Esp3I CGTCTC 2 cut(s) 1568, 1837
FaeI CATG 7 cut(s) 289, 313, 541, 1000, 1159, 1676, 1839
FaqI GGGAC 5 cut(s) 271, 557, 800, 1718, 1814
FatI CATG 7 cut(s) 285, 309, 537, 996, 1155, 1672, 1835
FauI CCCGC 7 cut(s) 619, 1414, 1695, 1770, 1882, 2010, 2040
FblI GTMKAC 2 cut(s) 96, 306
FokI GGATG 6 cut(s) 374, 484, 866, 985, 989, 1337
FriOI GRGCYC 2 cut(s) 869, 1434
FspBI CTAG 7 cut(s) 86, 609, 648, 665, 719, 905, 1043
GlaI GCGC 3 cut(s) 402, 586, 1776
GsaI CCCAGC 1 cut(s) 1150
GsuI CTGGAG 3 cut(s) 1712, 1880, 2048
HaeII RGCGCY 1 cut(s) 404
HgaI GACGC 2 cut(s) 1133, 1613
HhaI GCGC 3 cut(s) 403, 587, 1777
Hin1I GRCGYC 2 cut(s) 1125, 1605
Hin1II CATG 7 cut(s) 289, 313, 541, 1000, 1159, 1676, 1839
Hin6I GCGC 3 cut(s) 401, 585, 1775
HinP1I GCGC 3 cut(s) 401, 585, 1775
HphI GGTGA 9 cut(s) 304, 477, 646, 1121, 1271, 1318, 1355, 1672, 1772
Hpy166II GTNNAC 7 cut(s) 97, 243, 307, 592, 1112, 1314, 1590
Hpy188III TCNNGA 5 cut(s) 218, 1121, 1789, 1859, 1963
Hpy8I GTNNAC 7 cut(s) 97, 243, 307, 592, 1112, 1314, 1590
Hpy99I CGWCG 5 cut(s) 40, 272, 1127, 1384, 1607
HpyCH4III ACNGT 7 cut(s) 208, 262, 292, 459, 603, 634, 1109
HpyCH4IV ACGT 1 cut(s) 1310
HpyCH4V TGCA 4 cut(s) 1027, 1288, 1820, 2072
HpyF10VI GCNNNNNNNGC 9 cut(s) 59, 383, 442, 472, 562, 1438, 1724, 1826, 1934
HpySE526I ACGT 1 cut(s) 1310
Hsp92I GRCGYC 2 cut(s) 1125, 1605
Hsp92II CATG 7 cut(s) 289, 313, 541, 1000, 1159, 1676, 1839
HspAI GCGC 3 cut(s) 401, 585, 1775
KpnI GGTACC 2 cut(s) 771, 1338
KspI CCGCGG 1 cut(s) 1878
Kzo9I GATC 8 cut(s) 32, 182, 300, 1117, 1271, 1360, 1370, 1864
LmnI GCTCC 9 cut(s) 423, 864, 924, 1236, 1429, 1573, 1699, 1750, 2044
Lsp1109I GCAGC 9 cut(s) 453, 505, 769, 1431, 1453, 1750, 1804, 1924, 1927
LweI GCATC 4 cut(s) 462, 970, 1009, 1297
MaeI CTAG 7 cut(s) 86, 609, 648, 665, 719, 905, 1043
MaeII ACGT 1 cut(s) 1310
MaeIII GTNAC 6 cut(s) 202, 483, 634, 667, 1132, 1306
MalI GATC 8 cut(s) 34, 184, 302, 1119, 1273, 1362, 1372, 1866
MbiI CCGCTC 2 cut(s) 1702, 2047
MboI GATC 8 cut(s) 32, 182, 300, 1117, 1271, 1360, 1370, 1864
MflI RGATCY 2 cut(s) 182, 1271
MhlI GDGCHC 4 cut(s) 869, 1215, 1434, 1578
MlsI TGGCCA 3 cut(s) 212, 536, 1727
MluCI AATT 3 cut(s) 101, 986, 1475
MluNI TGGCCA 3 cut(s) 212, 536, 1727
MlyI GAGTC 7 cut(s) 164, 329, 1069, 1700, 1796, 1832, 1847
MmeI TCCRAC 1 cut(s) 1065
Mox20I TGGCCA 3 cut(s) 212, 536, 1727
MscI TGGCCA 3 cut(s) 212, 536, 1727
MseI TTAA 2 cut(s) 989, 1971
MslI CAYNNNNRTG 3 cut(s) 290, 1001, 1187
Msp20I TGGCCA 3 cut(s) 212, 536, 1727
MspA1I CMGCKG 6 cut(s) 316, 760, 1409, 1444, 1741, 1877
Mva1269I GAATGC 2 cut(s) 225, 511
MvaI CCWGG 7 cut(s) 16, 55, 276, 1010, 1331, 1550, 2027
MvnI CGCG 4 cut(s) 585, 587, 1777, 1877
MwoI GCNNNNNNNGC 9 cut(s) 59, 383, 442, 472, 562, 1438, 1724, 1826, 1934
NcoI CCATGG 1 cut(s) 1155
NdeII GATC 8 cut(s) 32, 182, 300, 1117, 1271, 1360, 1370, 1864
NlaIII CATG 7 cut(s) 289, 313, 541, 1000, 1159, 1676, 1839
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 4 cut(s) 483, 634, 1132, 1306
NspI RCATGY 2 cut(s) 313, 1000
OliI CACNNNNGTG 1 cut(s) 1187
PaqCI CACCTGC 3 cut(s) 1293, 1648, 2063
PceI AGGCCT 1 cut(s) 352
PcsI WCGNNNNNNNCGW 4 cut(s) 35, 1055, 1464, 1608
PctI GAATGC 2 cut(s) 225, 511
PfeI GAWTC 4 cut(s) 5, 412, 1498, 1555
PflFI GACNNNGTC 1 cut(s) 1523
PfoI TCCNGGA 1 cut(s) 2025
PinAI ACCGGT 2 cut(s) 764, 1337
PleI GAGTC 7 cut(s) 163, 329, 1068, 1700, 1796, 1831, 1847
PpsI GAGTC 7 cut(s) 163, 329, 1068, 1700, 1796, 1831, 1847
PpuMI RGGWCCY 2 cut(s) 120, 544
PshBI ATTAAT 1 cut(s) 989
Psp124BI GAGCTC 1 cut(s) 869
Psp5II RGGWCCY 2 cut(s) 120, 544
Psp6I CCWGG 7 cut(s) 14, 53, 274, 1008, 1329, 1548, 2025
PspFI CCCAGC 1 cut(s) 1146
PspGI CCWGG 7 cut(s) 14, 53, 274, 1008, 1329, 1548, 2025
PspPI GGNCC 7 cut(s) 120, 193, 544, 787, 1078, 1376, 1525
PspPPI RGGWCCY 2 cut(s) 120, 544
PstI CTGCAG 1 cut(s) 1822
PstNI CAGNNNCTG 3 cut(s) 463, 1447, 1826
PsuI RGATCY 2 cut(s) 182, 1271
PsyI GACNNNGTC 1 cut(s) 1523
PvuII CAGCTG 2 cut(s) 760, 1444
RseI CAYNNNNRTG 3 cut(s) 290, 1001, 1187
SacI GAGCTC 1 cut(s) 869
SacII CCGCGG 1 cut(s) 1878
SaqAI TTAA 2 cut(s) 989, 1971
Sau3AI GATC 8 cut(s) 32, 182, 300, 1117, 1271, 1360, 1370, 1864
Sau96I GGNCC 7 cut(s) 120, 193, 544, 787, 1078, 1376, 1525
SchI GAGTC 7 cut(s) 164, 329, 1069, 1700, 1796, 1832, 1847
SduI GDGCHC 4 cut(s) 869, 1215, 1434, 1578
SfaNI GCATC 4 cut(s) 462, 970, 1009, 1297
SfcI CTRYAG 2 cut(s) 455, 1818
Sfr303I CCGCGG 1 cut(s) 1878
SgrBI CCGCGG 1 cut(s) 1878
SinI GGWCC 4 cut(s) 120, 544, 787, 1525
SmaI CCCGGG 4 cut(s) 833, 1368, 1571, 1799
SmiMI CAYNNNNRTG 3 cut(s) 290, 1001, 1187
SmlI CTYRAG 1 cut(s) 1754
SmoI CTYRAG 1 cut(s) 1754
Sse9I AATT 3 cut(s) 101, 986, 1475
SseBI AGGCCT 1 cut(s) 352
SspMI CTAG 7 cut(s) 86, 609, 648, 665, 719, 905, 1043
SstI GAGCTC 1 cut(s) 869
StuI AGGCCT 1 cut(s) 352
StyI CCWWGG 5 cut(s) 85, 424, 1042, 1155, 1425
TaaI ACNGT 7 cut(s) 208, 262, 292, 459, 603, 634, 1109
TaiI ACGT 1 cut(s) 1313
TaqI TCGA 8 cut(s) 75, 686, 1032, 1049, 1071, 1291, 1518, 1602
TaqII GACCGA 2 cut(s) 93, 1053
TasI AATT 3 cut(s) 101, 986, 1475
TatI WGTACW 1 cut(s) 1902
TauI GCSGC 6 cut(s) 316, 377, 664, 1988, 2057, 2060
TfiI GAWTC 4 cut(s) 5, 412, 1498, 1555
Tru1I TTAA 2 cut(s) 989, 1971
Tru9I TTAA 2 cut(s) 989, 1971
TscAI CASTG 4 cut(s) 213, 1215, 1237, 1321
TseFI GTSAC 4 cut(s) 483, 634, 1132, 1306
TseI GCWGC 9 cut(s) 466, 493, 757, 1441, 1444, 1738, 1817, 1937, 1940
Tsp45I GTSAC 4 cut(s) 483, 634, 1132, 1306
TspDTI ATGAA 5 cut(s) 868, 1467, 1485, 1661, 2016
TspMI CCCGGG 4 cut(s) 831, 1366, 1569, 1797
TspRI CASTG 4 cut(s) 213, 1215, 1237, 1321
Tth111I GACNNNGTC 1 cut(s) 1523
VpaK11BI GGWCC 4 cut(s) 120, 544, 787, 1525
VspI ATTAAT 1 cut(s) 989
XapI RAATTY 1 cut(s) 1475
XceI RCATGY 2 cut(s) 313, 1000
XmaI CCCGGG 4 cut(s) 831, 1366, 1569, 1797
XmaJI CCTAGG 2 cut(s) 85, 1042
XmiI GTMKAC 2 cut(s) 96, 306
XspI CTAG 7 cut(s) 86, 609, 648, 665, 719, 905, 1043
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.