Rmu_ssc0000443.1_g000032

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000443.1
OG0000087
Physical Location & Seq
Reverse (-)
114557 .. 116859
2303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000443.1_g000032.1.cds

Sequence Viewer

Length: 2061 bp
atggaatcagaagtcaggggtggggatacaggatcgtcgtaccagtcctctgccagtcaagctgaagtggacatcgaccggtacctaggccgggtagaccaattagcggagaacacggggtcctcgactggggtgttctcggagagtagtggggagtctgatgagggtgagagtgagggtggatctgcggaggctccggtagtcacagtggccattcccgagggcattcctaagccgaggtacacgcttgcggacgggaccgtatgcgacgaacctgggagaagcatgacggtgaaggagatcgtggacatgcggctgaagtgggggataccggacgcggtagagcttaggccacttagggatggggagatggccgccaatcctgccccgggctgggtggcgctgcacgagaatcagctccaccaagggttatcgctacccctaccccggtgcctacagtatctgctgcggatgctgaacctgtcatcggggcagctgaccccgaatgccgttcgccaaacatatagtatgatggctatgtgggacctgtgccagaagcagtcttgtgcaggtacagtgacctttgcctctagggattacgagccgctagttactgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggtgggcggtggcagataaaaaataagaagtggcagctgaccggtacctttcaagctatcggggatcagtcctatacgctatccgaagtggaaaagaagaggatagcccgggtatatgccgtatggtcggagaaagagaggagctcttatagattcatccggcactctatactctctaggctagggttagggtggctccccgtgaaagccccgaagaggaaaccccggaaaggcaaggaggaggacaagatggatgacgctcaactgatggacatgctgatgagccagggagaagatgccctgcacatcgacgtcgacctggggtcgaaaggcacgagtcggtccattgaagagacccttttagagataactgatgagggatacggtgaacctgatcccgacgctcctgtggcccaccccgtgcagccctccatggccgacgtaattatgattgatgacacctgcatgggaaaggtaccggcctctgtgcctatctcttctcgctctactgggagcgatgaggcgctactccctggtgagaagaagagatcccacaagcaccggcgtcgaactgataaggaggtgacgtacactggccgggatgtccagggtgccggtgcgaaaaggcaaaagaaagatcacccgggatcagggccgtcaccttccctgggtctgttatctcccgtcgttccggtaatccctaagaagcccatcaagcagctgctgaaagaatacggggtcgctaatgaaaagttcgtgcgatccatgcttggggatctgaaggatatcgacctcgaccgggttcgagctaaagataatactccccaggagaatcaccgtctcgcccgggaatcgttgatgcgggcactctttaatgtgtacgccatagacgccagtgaggaggatactcacctgaaggaggaggttagcaatctttccgggcaggtgaagtaccttcatggcgagaaggccaagctggagaaggagcgggactcgttgaaggctgagatggccgcctctaagcagcggattgctgagcttgagggcgaggttgctgaggagagggaggaggtgaagaatgcccgggactccgagaagaaggctgcagagtctgccgtctcatggaaggagaaagcagacgctctggaggatcgcctacccgcggagagggacgaggccgtggaagagtacaagtcctcagatgagcttatctccatgctggctgctgcccaagacaaggctgtcattatgaagtttaaggagtgggtggcggccgggtatctagatgaggccaaattcaggcggggtctcctggagaaaaagaaaaaaaagcgggaggcggcgggcaagtctagtgccgacgggtctcagagtatcgatggcgatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

686

Amino Acids

76.06

Weight (kDa)

5.88

Isoelectric Point (pI)

46.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1136, 1600
AasI GACNNNNNNGTC 1 cut(s) 1907
AatII GACGTC 1 cut(s) 981
Acc36I ACCTGC 3 cut(s) 560, 1136, 1600
Acc65I GGTACC 3 cut(s) 81, 710, 1141
AccB1I GGYRCC 5 cut(s) 81, 450, 710, 1141, 1277
AccBSI CCGCTC 1 cut(s) 1654
AccI GTMKAC 2 cut(s) 96, 981
AccII CGCG 2 cut(s) 338, 1829
AclWI GGATC 9 cut(s) 40, 190, 738, 1055, 1209, 1321, 1422, 1449, 1824
AcoI YGGCCR 6 cut(s) 210, 372, 1101, 1261, 1677, 1938
AcsI RAATTY 1 cut(s) 1961
AcuI CTGAAG 4 cut(s) 84, 338, 1466, 1601
AcyI GRCGYC 3 cut(s) 978, 1231, 1557
AdeI CACNNNGTG 1 cut(s) 1087
AgeI ACCGGT 2 cut(s) 78, 707
AgsI TTSAA 3 cut(s) 719, 1016, 1666
AhdI GACNNNNNGTC 1 cut(s) 988
AjnI CCWGG 8 cut(s) 274, 951, 984, 1198, 1272, 1332, 1491, 1977
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
Alw21I GWGCWC 1 cut(s) 812
Alw26I GTCTC 5 cut(s) 1013, 1511, 1789, 1979, 2037
AlwI GGATC 9 cut(s) 40, 190, 738, 1055, 1209, 1321, 1422, 1449, 1824
AlwNI CAGNNNCTG 3 cut(s) 463, 1390, 1778
Ama87I CYCGRG 6 cut(s) 218, 388, 774, 1309, 1512, 1749
ApoI RAATTY 1 cut(s) 1961
AsiGI ACCGGT 2 cut(s) 78, 707
Asp718I GGTACC 3 cut(s) 81, 710, 1141
AspA2I CCTAGG 1 cut(s) 85
AspLEI GCGC 2 cut(s) 403, 1192
AspS9I GGNCC 6 cut(s) 120, 258, 544, 1008, 1078, 1319
AvaI CYCGRG 6 cut(s) 218, 388, 774, 1309, 1512, 1749
AvaII GGWCC 4 cut(s) 120, 258, 544, 1008
AvrII CCTAGG 1 cut(s) 85
BaeGI GKGCMC 1 cut(s) 1534
BalI TGGCCA 1 cut(s) 212
BanI GGYRCC 5 cut(s) 81, 450, 710, 1141, 1277
BanII GRGCYC 1 cut(s) 812
BauI CACGAG 2 cut(s) 407, 1000
Bbv12I GWGCWC 1 cut(s) 812
BbvCI CCTCAGC 1 cut(s) 1722
BccI CCATC 8 cut(s) 356, 364, 526, 910, 928, 1385, 1669, 2039
BceAI ACGGC 5 cut(s) 494, 770, 1306, 1766, 1829
BcgI CGANNNNNNTGC 2 cut(s) 1214, 1248
BciT130I CCWGG 8 cut(s) 276, 953, 986, 1200, 1274, 1334, 1493, 1979
BciVI GTATCC 4 cut(s) 19, 321, 1040, 1564
BcoDI GTCTC 5 cut(s) 1013, 1511, 1789, 1979, 2037
BfaI CTAG 8 cut(s) 86, 591, 608, 662, 843, 848, 1949, 2019
BfmI CTRYAG 2 cut(s) 455, 1770
BfoI RGCGCY 2 cut(s) 404, 1193
BfuAI ACCTGC 3 cut(s) 560, 1136, 1600
BfuI GTATCC 4 cut(s) 19, 321, 1040, 1564
BlnI CCTAGG 1 cut(s) 85
BlpI GCTNAGC 1 cut(s) 1701
Bme18I GGWCC 4 cut(s) 120, 258, 544, 1008
BmeRI GACNNNNNGTC 1 cut(s) 988
BmeT110I CYCGRG 6 cut(s) 218, 388, 774, 1309, 1512, 1749
BmgT120I GGNCC 6 cut(s) 120, 258, 544, 1008, 1078, 1319
BmrI ACTGGG 2 cut(s) 138, 1185
BmsI GCATC 3 cut(s) 462, 952, 1515
BmuI ACTGGG 2 cut(s) 138, 1185
BplI GAGNNNNNCTC 6 cut(s) 794, 826, 1643, 1675, 1862, 1894
BpmI CTGGAG 3 cut(s) 1664, 1832, 2000
Bpu10I CCTNAGC 3 cut(s) 231, 347, 1722
Bpu1102I GCTNAGC 1 cut(s) 1701
BpuEI CTTGAG 1 cut(s) 1727
Bsa29I ATCGAT 1 cut(s) 2043
BsaBI GATNNNNATC 1 cut(s) 2049
BsaHI GRCGYC 3 cut(s) 978, 1231, 1557
BsaI GGTCTC 3 cut(s) 1013, 1979, 2037
BsaWI WCCGGW 5 cut(s) 78, 196, 331, 707, 1357
BsaXI ACNNNNNCTCC 2 cut(s) 1238, 1268
Bse118I RCCGGY 5 cut(s) 78, 707, 1144, 1227, 1280
Bse1I ACTGG 6 cut(s) 43, 54, 133, 1180, 1264, 1560
Bse8I GATNNNNATC 1 cut(s) 2049
BseBI CCWGG 8 cut(s) 276, 953, 986, 1200, 1274, 1334, 1493, 1979
BseCI ATCGAT 1 cut(s) 2043
BseGI GGATG 5 cut(s) 367, 477, 822, 925, 1273
BseJI GATNNNNATC 1 cut(s) 2049
BseMII CTCAG 5 cut(s) 1662, 1692, 1713, 1878, 2048
BseNI ACTGG 6 cut(s) 43, 54, 133, 1180, 1264, 1560
BseRI GAGGAG 6 cut(s) 820, 920, 1580, 1601, 1739, 1748
BseSI GKGCMC 1 cut(s) 1534
BseX3I CGGCCG 1 cut(s) 1938
BseYI CCCAGC 1 cut(s) 393
BsgI GTGCAG 4 cut(s) 389, 588, 953, 1109
Bsh1236I CGCG 2 cut(s) 338, 1829
Bsh1285I CGRYCG 4 cut(s) 79, 1465, 1941, 2053
BshNI GGYRCC 5 cut(s) 81, 450, 710, 1141, 1277
BshTI ACCGGT 2 cut(s) 78, 707
BshVI ATCGAT 1 cut(s) 2043
BsiEI CGRYCG 4 cut(s) 79, 1465, 1941, 2053
BsiHKAI GWGCWC 1 cut(s) 812
BsiHKCI CYCGRG 6 cut(s) 218, 388, 774, 1309, 1512, 1749
BslFI GGGAC 5 cut(s) 271, 557, 1670, 1766, 1850
BsmAI GTCTC 5 cut(s) 1013, 1511, 1789, 1979, 2037
BsmBI CGTCTC 2 cut(s) 1511, 1789
BsmFI GGGAC 5 cut(s) 271, 557, 1670, 1766, 1850
BsmI GAATGC 3 cut(s) 225, 511, 1750
Bso31I GGTCTC 3 cut(s) 1013, 1979, 2037
BsoBI CYCGRG 6 cut(s) 218, 388, 774, 1309, 1512, 1749
Bsp1286I GDGCHC 2 cut(s) 812, 1534
Bsp1720I GCTNAGC 1 cut(s) 1701
Bsp19I CCATGG 1 cut(s) 1098
BspCNI CTCAG 5 cut(s) 1663, 1693, 1714, 1877, 2047
BspDI ATCGAT 1 cut(s) 2043
BspFNI CGCG 2 cut(s) 338, 1829
BspMAI CTGCAG 1 cut(s) 1774
BspMI ACCTGC 3 cut(s) 560, 1136, 1600
BspPI GGATC 9 cut(s) 40, 190, 738, 1055, 1209, 1321, 1422, 1449, 1824
BspT107I GGYRCC 5 cut(s) 81, 450, 710, 1141, 1277
BspTNI GGTCTC 3 cut(s) 1013, 1979, 2037
BsrBI CCGCTC 1 cut(s) 1654
BsrFI RCCGGY 5 cut(s) 78, 707, 1144, 1227, 1280
BsrI ACTGG 6 cut(s) 43, 54, 133, 1180, 1264, 1560
BssAI RCCGGY 5 cut(s) 78, 707, 1144, 1227, 1280
BssNI GRCGYC 3 cut(s) 978, 1231, 1557
BssSI CACGAG 2 cut(s) 407, 1000
BssT1I CCWWGG 3 cut(s) 85, 424, 1098
Bst2BI CACGAG 2 cut(s) 407, 1000
Bst2UI CCWGG 8 cut(s) 276, 953, 986, 1200, 1274, 1334, 1493, 1979
Bst4CI ACNGT 7 cut(s) 208, 262, 292, 459, 577, 1052, 1505
Bst6I CTCTTC 6 cut(s) 758, 875, 1011, 1168, 1205, 1845
BstACI GRCGYC 3 cut(s) 978, 1231, 1557
BstAPI GCANNNNNTGC 1 cut(s) 1778
BstC8I GCNNGC 4 cut(s) 249, 1530, 1887, 2011
BstDSI CCRYGG 3 cut(s) 1098, 1827, 1845
BstENI CCTNNNNNAGG 1 cut(s) 1583
BstF5I GGATG 5 cut(s) 367, 477, 822, 925, 1273
BstFNI CGCG 2 cut(s) 338, 1829
BstH2I RGCGCY 2 cut(s) 404, 1193
BstHHI GCGC 2 cut(s) 403, 1192
BstMAI GTCTC 5 cut(s) 1013, 1511, 1789, 1979, 2037
BstMCI CGRYCG 4 cut(s) 79, 1465, 1941, 2053
BstMWI GCNNNNNNNGC 9 cut(s) 59, 383, 472, 1076, 1381, 1432, 1556, 1676, 1778
BstNI CCWGG 8 cut(s) 276, 953, 986, 1200, 1274, 1334, 1493, 1979
BstNSI RCATGY 2 cut(s) 313, 943
BstSFI CTRYAG 2 cut(s) 455, 1770
BstSLI GKGCMC 1 cut(s) 1534
BstUI CGCG 2 cut(s) 338, 1829
BstX2I RGATCY 3 cut(s) 182, 1214, 1441
BstYI RGATCY 3 cut(s) 182, 1214, 1441
BstZI CGGCCG 1 cut(s) 1938
Bsu15I ATCGAT 1 cut(s) 2043
BsuI GTATCC 4 cut(s) 19, 321, 1040, 1564
BsuTUI ATCGAT 1 cut(s) 2043
BtgI CCRYGG 3 cut(s) 1098, 1827, 1845
BtgZI GCGATG 1 cut(s) 1197
BtsCI GGATG 5 cut(s) 367, 477, 822, 925, 1273
BtsIMutI CAGTG 4 cut(s) 213, 582, 1257, 1567
BveI ACCTGC 3 cut(s) 560, 1136, 1600
Cac8I GCNNGC 4 cut(s) 249, 1530, 1887, 2011
CaiI CAGNNNCTG 3 cut(s) 463, 1390, 1778
CfoI GCGC 2 cut(s) 403, 1192
Cfr10I RCCGGY 5 cut(s) 78, 707, 1144, 1227, 1280
Cfr13I GGNCC 6 cut(s) 120, 258, 544, 1008, 1078, 1319
Cfr42I CCGCGG 1 cut(s) 1830
Cfr9I CCCGGG 5 cut(s) 388, 774, 1309, 1512, 1749
ClaI ATCGAT 1 cut(s) 2043
CseI GACGC 6 cut(s) 344, 932, 1076, 1220, 1565, 1814
CspAI ACCGGT 2 cut(s) 78, 707
CviAII CATG 9 cut(s) 286, 310, 940, 1099, 1132, 1432, 1625, 1788, 1882
DraIII CACNNNGTG 1 cut(s) 1087
DrdI GACNNNNNNGTC 1 cut(s) 1907
DriI GACNNNNNGTC 1 cut(s) 988
DseDI GACNNNNNNGTC 1 cut(s) 1907
EaeI YGGCCR 6 cut(s) 210, 372, 1101, 1261, 1677, 1938
EagI CGGCCG 1 cut(s) 1938
Eam1104I CTCTTC 6 cut(s) 758, 875, 1011, 1168, 1205, 1845
Eam1105I GACNNNNNGTC 1 cut(s) 988
EarI CTCTTC 6 cut(s) 758, 875, 1011, 1168, 1205, 1845
Ecl136II GAGCTC 1 cut(s) 810
EclXI CGGCCG 1 cut(s) 1938
Eco130I CCWWGG 3 cut(s) 85, 424, 1098
Eco24I GRGCYC 1 cut(s) 812
Eco31I GGTCTC 3 cut(s) 1013, 1979, 2037
Eco32I GATATC 1 cut(s) 1453
Eco47I GGWCC 4 cut(s) 120, 258, 544, 1008
Eco52I CGGCCG 1 cut(s) 1938
Eco53kI GAGCTC 1 cut(s) 810
Eco57I CTGAAG 4 cut(s) 84, 338, 1466, 1601
Eco88I CYCGRG 6 cut(s) 218, 388, 774, 1309, 1512, 1749
EcoICRI GAGCTC 1 cut(s) 810
EcoNI CCTNNNNNAGG 1 cut(s) 1583
EcoO109I RGGNCCY 2 cut(s) 120, 544
EcoRII CCWGG 8 cut(s) 274, 951, 984, 1198, 1272, 1332, 1491, 1977
EcoRV GATATC 1 cut(s) 1453
EcoT14I CCWWGG 3 cut(s) 85, 424, 1098
EcoT38I GRGCYC 1 cut(s) 812
ErhI CCWWGG 3 cut(s) 85, 424, 1098
Esp3I CGTCTC 2 cut(s) 1511, 1789
FaeI CATG 9 cut(s) 289, 313, 943, 1102, 1135, 1435, 1628, 1791, 1885
FalI AAGNNNNNCTT 2 cut(s) 1008, 1040
FaqI GGGAC 5 cut(s) 271, 557, 1670, 1766, 1850
FatI CATG 9 cut(s) 285, 309, 939, 1098, 1131, 1431, 1624, 1787, 1881
FauI CCCGC 6 cut(s) 1521, 1647, 1834, 1962, 1992, 2002
FblI GTMKAC 2 cut(s) 96, 981
FokI GGATG 5 cut(s) 374, 484, 809, 932, 1280
FriOI GRGCYC 1 cut(s) 812
FspBI CTAG 8 cut(s) 86, 591, 608, 662, 843, 848, 1949, 2019
GlaI GCGC 2 cut(s) 402, 1191
GsaI CCCAGC 1 cut(s) 397
GsuI CTGGAG 3 cut(s) 1664, 1832, 2000
HaeII RGCGCY 2 cut(s) 404, 1193
HgaI GACGC 6 cut(s) 344, 932, 1076, 1220, 1565, 1814
HhaI GCGC 2 cut(s) 403, 1192
Hin1I GRCGYC 3 cut(s) 978, 1231, 1557
Hin1II CATG 9 cut(s) 289, 313, 943, 1102, 1135, 1435, 1628, 1791, 1885
Hin6I GCGC 2 cut(s) 401, 1190
HinP1I GCGC 2 cut(s) 401, 1190
HincII GTYRAC 1 cut(s) 982
HindII GTYRAC 1 cut(s) 982
Hpy166II GTNNAC 8 cut(s) 70, 97, 243, 307, 982, 1055, 1257, 1546
Hpy188I TCNGA 9 cut(s) 10, 142, 160, 751, 796, 1446, 1759, 1867, 2037
Hpy188III TCNNGA 4 cut(s) 218, 1064, 1811, 1949
Hpy8I GTNNAC 8 cut(s) 70, 97, 243, 307, 982, 1055, 1257, 1546
Hpy99I CGWCG 9 cut(s) 40, 272, 980, 983, 1070, 1109, 1236, 1355, 2030
HpyCH4III ACNGT 7 cut(s) 208, 262, 292, 459, 577, 1052, 1505
HpyCH4IV ACGT 3 cut(s) 978, 1107, 1253
HpyCH4V TGCA 6 cut(s) 406, 569, 970, 1090, 1131, 1772
HpyF10VI GCNNNNNNNGC 9 cut(s) 59, 383, 472, 1076, 1381, 1432, 1556, 1676, 1778
HpySE526I ACGT 3 cut(s) 978, 1107, 1253
Hsp92I GRCGYC 3 cut(s) 978, 1231, 1557
Hsp92II CATG 9 cut(s) 289, 313, 943, 1102, 1135, 1435, 1628, 1791, 1885
HspAI GCGC 2 cut(s) 401, 1190
KpnI GGTACC 3 cut(s) 85, 714, 1145
KspI CCGCGG 1 cut(s) 1830
LmnI GCTCC 7 cut(s) 199, 423, 807, 867, 1075, 1179, 1651
LweI GCATC 3 cut(s) 462, 952, 1515
MaeI CTAG 8 cut(s) 86, 591, 608, 662, 843, 848, 1949, 2019
MaeII ACGT 3 cut(s) 978, 1107, 1253
MaeIII GTNAC 5 cut(s) 202, 577, 610, 1249, 1323
MbiI CCGCTC 1 cut(s) 1654
MflI RGATCY 3 cut(s) 182, 1214, 1441
MhlI GDGCHC 2 cut(s) 812, 1534
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 3 cut(s) 101, 1110, 1961
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 5 cut(s) 164, 1012, 1652, 1748, 1784
MmeI TCCRAC 1 cut(s) 774
Mox20I TGGCCA 1 cut(s) 212
MscI TGGCCA 1 cut(s) 212
MseI TTAA 2 cut(s) 1539, 1923
MslI CAYNNNNRTG 3 cut(s) 290, 944, 1130
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 5 cut(s) 496, 703, 1387, 1693, 1829
Mva1269I GAATGC 3 cut(s) 225, 511, 1750
MvaI CCWGG 8 cut(s) 276, 953, 986, 1200, 1274, 1334, 1493, 1979
MvnI CGCG 2 cut(s) 338, 1829
MwoI GCNNNNNNNGC 9 cut(s) 59, 383, 472, 1076, 1381, 1432, 1556, 1676, 1778
NcoI CCATGG 1 cut(s) 1098
NlaIII CATG 9 cut(s) 289, 313, 943, 1102, 1135, 1435, 1628, 1791, 1885
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 4 cut(s) 202, 577, 1249, 1323
NspI RCATGY 2 cut(s) 313, 943
PaqCI CACCTGC 2 cut(s) 1136, 1600
PasI CCCWGGG 1 cut(s) 1333
PcsI WCGNNNNNNNCGW 2 cut(s) 122, 998
PctI GAATGC 3 cut(s) 225, 511, 1750
PfeI GAWTC 5 cut(s) 5, 412, 819, 1498, 1517
PfoI TCCNGGA 1 cut(s) 1977
PinAI ACCGGT 2 cut(s) 78, 707
Ple19I CGATCG 1 cut(s) 2053
PleI GAGTC 5 cut(s) 163, 1011, 1652, 1748, 1783
PpsI GAGTC 5 cut(s) 163, 1011, 1652, 1748, 1783
PpuMI RGGWCCY 2 cut(s) 120, 544
Psp124BI GAGCTC 1 cut(s) 812
Psp5II RGGWCCY 2 cut(s) 120, 544
Psp6I CCWGG 8 cut(s) 274, 951, 984, 1198, 1272, 1332, 1491, 1977
PspFI CCCAGC 1 cut(s) 393
PspGI CCWGG 8 cut(s) 274, 951, 984, 1198, 1272, 1332, 1491, 1977
PspPI GGNCC 6 cut(s) 120, 258, 544, 1008, 1078, 1319
PspPPI RGGWCCY 2 cut(s) 120, 544
PstI CTGCAG 1 cut(s) 1774
PstNI CAGNNNCTG 3 cut(s) 463, 1390, 1778
PsuI RGATCY 3 cut(s) 182, 1214, 1441
PvuI CGATCG 1 cut(s) 2053
PvuII CAGCTG 3 cut(s) 496, 703, 1387
RseI CAYNNNNRTG 3 cut(s) 290, 944, 1130
SacI GAGCTC 1 cut(s) 812
SacII CCGCGG 1 cut(s) 1830
SalI GTCGAC 1 cut(s) 980
SaqAI TTAA 2 cut(s) 1539, 1923
Sau96I GGNCC 6 cut(s) 120, 258, 544, 1008, 1078, 1319
SchI GAGTC 5 cut(s) 164, 1012, 1652, 1748, 1784
SduI GDGCHC 2 cut(s) 812, 1534
SfaNI GCATC 3 cut(s) 462, 952, 1515
SfcI CTRYAG 2 cut(s) 455, 1770
Sfr303I CCGCGG 1 cut(s) 1830
SgrAI CRCCGGYG 1 cut(s) 1227
SgrBI CCGCGG 1 cut(s) 1830
SinI GGWCC 4 cut(s) 120, 258, 544, 1008
SmaI CCCGGG 5 cut(s) 390, 776, 1311, 1514, 1751
SmiMI CAYNNNNRTG 3 cut(s) 290, 944, 1130
SmlI CTYRAG 1 cut(s) 1706
SmoI CTYRAG 1 cut(s) 1706
Sse9I AATT 3 cut(s) 101, 1110, 1961
SspMI CTAG 8 cut(s) 86, 591, 608, 662, 843, 848, 1949, 2019
SstI GAGCTC 1 cut(s) 812
StyI CCWWGG 3 cut(s) 85, 424, 1098
TaaI ACNGT 7 cut(s) 208, 262, 292, 459, 577, 1052, 1505
TaiI ACGT 3 cut(s) 981, 1110, 1256
TaqII GACCGA 1 cut(s) 996
TasI AATT 3 cut(s) 101, 1110, 1961
TatI WGTACW 1 cut(s) 1854
TauI GCSGC 6 cut(s) 316, 377, 607, 1682, 1940, 2009
TfiI GAWTC 5 cut(s) 5, 412, 819, 1498, 1517
Tru1I TTAA 2 cut(s) 1539, 1923
Tru9I TTAA 2 cut(s) 1539, 1923
TscAI CASTG 4 cut(s) 213, 582, 1264, 1567
TseFI GTSAC 4 cut(s) 202, 577, 1249, 1323
Tsp45I GTSAC 4 cut(s) 202, 577, 1249, 1323
TspDTI ATGAA 4 cut(s) 811, 1428, 1613, 1931
TspMI CCCGGG 5 cut(s) 388, 774, 1309, 1512, 1749
TspRI CASTG 4 cut(s) 213, 582, 1264, 1567
VpaK11BI GGWCC 4 cut(s) 120, 258, 544, 1008
XagI CCTNNNNNAGG 1 cut(s) 1583
XapI RAATTY 1 cut(s) 1961
XbaI TCTAGA 1 cut(s) 1948
XceI RCATGY 2 cut(s) 313, 943
XmaI CCCGGG 5 cut(s) 388, 774, 1309, 1512, 1749
XmaJI CCTAGG 1 cut(s) 85
XmiI GTMKAC 2 cut(s) 96, 981
XspI CTAG 8 cut(s) 86, 591, 608, 662, 843, 848, 1949, 2019
ZraI GACGTC 1 cut(s) 979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.