Rmu_sc0001244.1_g000023

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001244.1
OG0000087
Physical Location & Seq
Forward (+)
146524 .. 148705
2182 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001244.1_g000023.1.cds

Sequence Viewer

Length: 1551 bp
atggaatcagaaaccaagactgaggaagcaggatcgtcctatcaatcttccgcgagacaagcggaagcatatattgacctggctggaagtagtacacgcatggggttagcagagaataccagatcttttactagggtgctatcggagagtagcaagagtactgatggatatgacagcaaggatgattctggggaggaggcgcaaggagtcacggcctctaaaggctggagagatggcagcgaatccgcctccgggatgggtggtgttgcacgagaaccagttccatcaagggctatcactaccgctgccgcggtgcctacagtatctattgaggatgctgaacctgtcaccggggcagttgactccgaatgcctggtggtagatgttgagtatgatggccatgtgggacttgtgctagcaagggtggcccaccatcaactaattccgagcagtgtaccgggacaatggcagattaaaaataagaagtggcacttaacgggtacgttccaggccataggggatcagtcgtactcattgtcgaaggtcgagagaaaaaggatagcccggcggaaaccccagaaaggtaaggaggctcatgcccttcacattgatgttgacctcgggttgaaggagatgggtcgctcagttgaagaatttcttctcgagattccggatgaaggggacgtagttaccattgcttatcccgaaagaggaaaggcgctcgtgtctggctctatcttttcccggtctgccgggtcagctggaatcgaggaagtcctgcttccgggtgagaagaagaggttccacaggcacggccatcggagcggggaccaggaggaggttacctacactggtcgagacgttaaagggacagaacccaagaggcagaagaaaaatcatccaggaccgaaaccgtcgccatcacttgggattttgtctccggccataccactagtccccaagaagcccataaagcaactgttgagcgagtacggggttgctgaagagaagttcgtgcactctatgctagccgatctgaaagacatagatctagaccaagtatgggcgaaagacaacaccccccaagaaaatcttcatatcgcccgagaatcaatgatgtgggcactattcaacgtgtacgcgattgatgctagcgaggaagatacacaactaaaggaggaggttagtaacctcttcgggcatgtgaagtatcttcacggggaaaaggcgaggctggagaaggagtgggactctttgaagatgaaggtagagtccttaactcctaaggtaaccgagctggaggcggcagagaaaaggatcttagagcttgagggtgaacttgctagagccaagacagagataggaagtgcccgggattccttgaaagagaaggccgttgccgggtacaagggctcgcaagatcttgtcgacatgctactcgctgttcaggacaaagccgtgatcatgaagttcaaagagtgggtggcagccgggtacctggatgaagccaaattcaggcggggactgctggagaagaagaagaaggaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

516

Amino Acids

56.8

Weight (kDa)

5.89

Isoelectric Point (pI)

45.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1494
AccB1I GGYRCC 2 cut(s) 313, 1494
AccB7I CCANNNNNTGG 1 cut(s) 926
AccBSI CCGCTC 1 cut(s) 825
AccI GTMKAC 1 cut(s) 1428
AccII CGCG 3 cut(s) 53, 311, 1142
AccIII TCCGGA 1 cut(s) 670
AclWI GGATC 3 cut(s) 40, 528, 1325
AcoI YGGCCR 3 cut(s) 397, 814, 942
AcsI RAATTY 2 cut(s) 653, 1511
AcuI CTGAAG 1 cut(s) 1023
AfaI GTAC 9 cut(s) 94, 160, 456, 502, 530, 992, 1139, 1406, 1496
AflIII ACRYGT 1 cut(s) 1134
AgsI TTSAA 6 cut(s) 628, 650, 1132, 1258, 1384, 1474
AhlI ACTAGT 1 cut(s) 952
AjnI CCWGG 6 cut(s) 78, 372, 507, 831, 901, 1497
AjuI GAANNNNNNNTTGG 2 cut(s) 1077, 1109
AluBI AGCT 3 cut(s) 761, 1297, 1327
AluI AGCT 3 cut(s) 761, 1297, 1327
Alw21I GWGCWC 1 cut(s) 1020
Alw26I GTCTC 3 cut(s) 49, 852, 942
Alw44I GTGCAC 1 cut(s) 1016
AlwI GGATC 3 cut(s) 40, 528, 1325
Ama87I CYCGRG 4 cut(s) 620, 662, 1104, 1371
Aor13HI TCCGGA 1 cut(s) 670
AoxI GGCC 7 cut(s) 213, 397, 426, 510, 814, 942, 1392
ApaLI GTGCAC 1 cut(s) 1016
ApeKI GCWGC 3 cut(s) 237, 305, 1487
ApoI RAATTY 2 cut(s) 653, 1511
Asp700I GAANNNNTTC 5 cut(s) 279, 654, 657, 800, 1092
Asp718I GGTACC 1 cut(s) 1494
AspLEI GCGC 2 cut(s) 202, 721
AspS9I GGNCC 3 cut(s) 427, 829, 905
AsuHPI GGTGA 3 cut(s) 340, 800, 1346
AsuNHI GCTAGC 3 cut(s) 415, 1027, 1151
AvaI CYCGRG 4 cut(s) 620, 662, 1104, 1371
AvaII GGWCC 2 cut(s) 829, 905
AxyI CCTNAGG 1 cut(s) 1284
BaeGI GKGCMC 3 cut(s) 1020, 1126, 1372
BalI TGGCCA 1 cut(s) 399
BanI GGYRCC 2 cut(s) 313, 1494
BanII GRGCYC 1 cut(s) 1415
BauI CACGAG 2 cut(s) 270, 722
Bbv12I GWGCWC 1 cut(s) 1020
BbvI GCAGC 3 cut(s) 249, 292, 1499
BccI CCATC 9 cut(s) 158, 227, 250, 292, 389, 441, 628, 825, 928
BceAI ACGGC 4 cut(s) 228, 829, 1379, 1442
BcgI CGANNNNNNTGC 2 cut(s) 800, 834
BciT130I CCWGG 6 cut(s) 80, 374, 509, 833, 903, 1499
BclI TGATCA 1 cut(s) 1461
BcoDI GTCTC 3 cut(s) 49, 852, 942
BcuI ACTAGT 1 cut(s) 952
BfaI CTAG 7 cut(s) 132, 416, 953, 1028, 1052, 1152, 1344
BfmI CTRYAG 1 cut(s) 318
BfoI RGCGCY 1 cut(s) 722
BglII AGATCT 3 cut(s) 122, 1048, 1420
BisI GCNGC 5 cut(s) 238, 306, 309, 1305, 1488
BlsI GCNGC 5 cut(s) 239, 307, 310, 1306, 1489
BmcAI AGTACT 1 cut(s) 160
Bme18I GGWCC 2 cut(s) 829, 905
BmeT110I CYCGRG 4 cut(s) 620, 662, 1104, 1371
BmgT120I GGNCC 3 cut(s) 427, 829, 905
BmiI GGNNCC 4 cut(s) 315, 803, 830, 1496
BmsI GCATC 2 cut(s) 325, 1138
BmtI GCTAGC 3 cut(s) 419, 1031, 1155
BplI GAGNNNNNCTC 2 cut(s) 1235, 1267
BpmI CTGGAG 4 cut(s) 247, 1256, 1319, 1550
BpuEI CTTGAG 1 cut(s) 1349
BsaJI CCNNGG 4 cut(s) 309, 351, 619, 1371
BsaWI WCCGGW 1 cut(s) 670
BsaXI ACNNNNNCTCC 2 cut(s) 1229, 1259
Bse1I ACTGG 2 cut(s) 278, 856
Bse21I CCTNAGG 1 cut(s) 1284
Bse3DI GCAATG 1 cut(s) 693
BseAI TCCGGA 1 cut(s) 670
BseBI CCWGG 6 cut(s) 80, 374, 509, 833, 903, 1499
BseDI CCNNGG 4 cut(s) 309, 351, 619, 1371
BseGI GGATG 6 cut(s) 187, 261, 340, 679, 898, 1507
BseMI GCAATG 1 cut(s) 693
BseMII CTCAG 2 cut(s) 12, 657
BseNI ACTGG 2 cut(s) 278, 856
BseRI GAGGAG 3 cut(s) 209, 851, 1193
BseSI GKGCMC 3 cut(s) 1020, 1126, 1372
BseXI GCAGC 3 cut(s) 249, 292, 1499
Bsh1236I CGCG 3 cut(s) 53, 311, 1142
BshFI GGCC 7 cut(s) 215, 399, 428, 512, 816, 944, 1394
BshNI GGYRCC 2 cut(s) 313, 1494
BsiHKAI GWGCWC 1 cut(s) 1020
BsiHKCI CYCGRG 4 cut(s) 620, 662, 1104, 1371
BslFI GGGAC 8 cut(s) 420, 474, 695, 842, 883, 941, 1262, 1536
BsmAI GTCTC 3 cut(s) 49, 852, 942
BsmBI CGTCTC 1 cut(s) 852
BsmFI GGGAC 8 cut(s) 420, 474, 695, 842, 883, 941, 1262, 1536
BsmI GAATGC 1 cut(s) 374
BsnI GGCC 7 cut(s) 215, 399, 428, 512, 816, 944, 1394
BsoBI CYCGRG 4 cut(s) 620, 662, 1104, 1371
Bsp1286I GDGCHC 4 cut(s) 1020, 1126, 1372, 1415
Bsp13I TCCGGA 1 cut(s) 670
Bsp143I GATC 8 cut(s) 32, 122, 520, 1033, 1048, 1317, 1420, 1461
BspANI GGCC 7 cut(s) 215, 399, 428, 512, 816, 944, 1394
BspCNI CTCAG 2 cut(s) 13, 656
BspEI TCCGGA 1 cut(s) 670
BspFNI CGCG 3 cut(s) 53, 311, 1142
BspHI TCATGA 1 cut(s) 1464
BspLI GGNNCC 4 cut(s) 315, 803, 830, 1496
BspOI GCTAGC 3 cut(s) 419, 1031, 1155
BspPI GGATC 3 cut(s) 40, 528, 1325
BspT107I GGYRCC 2 cut(s) 313, 1494
BsrBI CCGCTC 1 cut(s) 825
BsrDI GCAATG 1 cut(s) 693
BsrI ACTGG 2 cut(s) 278, 856
BssECI CCNNGG 4 cut(s) 309, 351, 619, 1371
BssMI GATC 8 cut(s) 32, 122, 520, 1033, 1048, 1317, 1420, 1461
BssSI CACGAG 2 cut(s) 270, 722
Bst2BI CACGAG 2 cut(s) 270, 722
Bst2UI CCWGG 6 cut(s) 80, 374, 509, 833, 903, 1499
Bst4CI ACNGT 3 cut(s) 322, 915, 981
Bst6I CTCTTC 3 cut(s) 791, 999, 1199
BstAPI GCANNNNNTGC 1 cut(s) 1024
BstC8I GCNNGC 4 cut(s) 417, 1029, 1153, 1415
BstDEI CTNAG 4 cut(s) 21, 643, 1284, 1321
BstDSI CCRYGG 1 cut(s) 309
BstEII GGTNACC 2 cut(s) 841, 1288
BstF5I GGATG 6 cut(s) 187, 261, 340, 679, 898, 1507
BstFNI CGCG 3 cut(s) 53, 311, 1142
BstH2I RGCGCY 1 cut(s) 722
BstHHI GCGC 2 cut(s) 202, 721
BstKTI GATC 8 cut(s) 35, 125, 523, 1036, 1051, 1320, 1423, 1464
BstMAI GTCTC 3 cut(s) 49, 852, 942
BstMBI GATC 8 cut(s) 32, 122, 520, 1033, 1048, 1317, 1420, 1461
BstMWI GCNNNNNNNGC 8 cut(s) 59, 425, 758, 822, 973, 1024, 1148, 1525
BstNI CCWGG 6 cut(s) 80, 374, 509, 833, 903, 1499
BstNSI RCATGY 2 cut(s) 1205, 1435
BstPI GGTNACC 2 cut(s) 841, 1288
BstSFI CTRYAG 1 cut(s) 318
BstSLI GKGCMC 3 cut(s) 1020, 1126, 1372
BstUI CGCG 3 cut(s) 53, 311, 1142
BstV1I GCAGC 3 cut(s) 249, 292, 1499
BstX2I RGATCY 4 cut(s) 122, 1048, 1317, 1420
BstYI RGATCY 4 cut(s) 122, 1048, 1317, 1420
Bsu36I CCTNAGG 1 cut(s) 1284
BsuRI GGCC 7 cut(s) 215, 399, 428, 512, 816, 944, 1394
BtgI CCRYGG 1 cut(s) 309
BtsCI GGATG 6 cut(s) 187, 261, 340, 679, 898, 1507
BtsI GCAGTG 1 cut(s) 457
BtsIMutI CAGTG 2 cut(s) 457, 849
Cac8I GCNNGC 4 cut(s) 417, 1029, 1153, 1415
CciI TCATGA 1 cut(s) 1464
CfoI GCGC 2 cut(s) 202, 721
Cfr13I GGNCC 3 cut(s) 427, 829, 905
Cfr42I CCGCGG 1 cut(s) 312
Cfr9I CCCGGG 1 cut(s) 1371
Csp6I GTAC 9 cut(s) 93, 159, 455, 501, 529, 991, 1138, 1405, 1495
CviAII CATG 6 cut(s) 100, 401, 596, 1202, 1432, 1465
CviQI GTAC 9 cut(s) 93, 159, 455, 501, 529, 991, 1138, 1405, 1495
DdeI CTNAG 4 cut(s) 21, 643, 1284, 1321
DpnI GATC 8 cut(s) 34, 124, 522, 1035, 1050, 1319, 1422, 1463
DpnII GATC 8 cut(s) 32, 122, 520, 1033, 1048, 1317, 1420, 1461
EaeI YGGCCR 3 cut(s) 397, 814, 942
Eam1104I CTCTTC 3 cut(s) 791, 999, 1199
EarI CTCTTC 3 cut(s) 791, 999, 1199
EciI GGCGGA 2 cut(s) 235, 583
Eco24I GRGCYC 1 cut(s) 1415
Eco47I GGWCC 2 cut(s) 829, 905
Eco57I CTGAAG 1 cut(s) 1023
Eco81I CCTNAGG 1 cut(s) 1284
Eco88I CYCGRG 4 cut(s) 620, 662, 1104, 1371
Eco91I GGTNACC 2 cut(s) 841, 1288
EcoO65I GGTNACC 2 cut(s) 841, 1288
EcoRII CCWGG 6 cut(s) 78, 372, 507, 831, 901, 1497
EcoT38I GRGCYC 1 cut(s) 1415
Esp3I CGTCTC 1 cut(s) 852
FaeI CATG 6 cut(s) 103, 404, 599, 1205, 1435, 1468
FalI AAGNNNNNCTT 8 cut(s) 476, 508, 642, 674, 765, 797, 1077, 1109
FaqI GGGAC 8 cut(s) 420, 474, 695, 842, 883, 941, 1262, 1536
FatI CATG 6 cut(s) 99, 400, 595, 1201, 1431, 1464
FauI CCCGC 2 cut(s) 818, 1512
FbaI TGATCA 1 cut(s) 1461
FblI GTMKAC 1 cut(s) 1428
Fnu4HI GCNGC 5 cut(s) 238, 306, 309, 1305, 1488
FokI GGATG 6 cut(s) 194, 268, 347, 686, 885, 1514
FriOI GRGCYC 1 cut(s) 1415
Fsp4HI GCNGC 5 cut(s) 238, 306, 309, 1305, 1488
FspBI CTAG 7 cut(s) 132, 416, 953, 1028, 1052, 1152, 1344
GlaI GCGC 2 cut(s) 201, 720
GluI GCNGC 5 cut(s) 238, 306, 309, 1305, 1488
GsuI CTGGAG 4 cut(s) 247, 1256, 1319, 1550
HaeII RGCGCY 1 cut(s) 722
HaeIII GGCC 7 cut(s) 215, 399, 428, 512, 816, 944, 1394
HhaI GCGC 2 cut(s) 202, 721
Hin1II CATG 6 cut(s) 103, 404, 599, 1205, 1435, 1468
Hin6I GCGC 2 cut(s) 200, 719
HinP1I GCGC 2 cut(s) 200, 719
HincII GTYRAC 3 cut(s) 361, 616, 1429
HindII GTYRAC 3 cut(s) 361, 616, 1429
HphI GGTGA 3 cut(s) 340, 800, 1346
Hpy166II GTNNAC 8 cut(s) 95, 361, 455, 616, 1018, 1138, 1337, 1429
Hpy188I TCNGA 6 cut(s) 10, 145, 367, 447, 822, 1038
Hpy188III TCNNGA 9 cut(s) 547, 662, 664, 671, 704, 857, 1052, 1448, 1465
Hpy8I GTNNAC 8 cut(s) 95, 361, 455, 616, 1018, 1138, 1337, 1429
Hpy99I CGWCG 1 cut(s) 919
HpyAV CCTTC 8 cut(s) 535, 611, 622, 671, 1234, 1258, 1384, 1537
HpyCH4III ACNGT 3 cut(s) 322, 915, 981
HpyCH4IV ACGT 4 cut(s) 503, 684, 861, 1134
HpyCH4V TGCA 2 cut(s) 269, 1018
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 425, 758, 822, 973, 1024, 1148, 1525
HpyF3I CTNAG 4 cut(s) 21, 643, 1284, 1321
HpySE526I ACGT 4 cut(s) 503, 684, 861, 1134
Hsp92II CATG 6 cut(s) 103, 404, 599, 1205, 1435, 1468
HspAI GCGC 2 cut(s) 200, 719
Kpn2I TCCGGA 1 cut(s) 670
KpnI GGTACC 1 cut(s) 1498
Ksp22I TGATCA 1 cut(s) 1461
KspI CCGCGG 1 cut(s) 312
Kzo9I GATC 8 cut(s) 32, 122, 520, 1033, 1048, 1317, 1420, 1461
LmnI GCTCC 1 cut(s) 822
Lsp1109I GCAGC 3 cut(s) 249, 292, 1499
LweI GCATC 2 cut(s) 325, 1138
MaeI CTAG 7 cut(s) 132, 416, 953, 1028, 1052, 1152, 1344
MaeII ACGT 4 cut(s) 503, 684, 861, 1134
MaeIII GTNAC 6 cut(s) 208, 346, 688, 841, 1187, 1288
MalI GATC 8 cut(s) 34, 124, 522, 1035, 1050, 1319, 1422, 1463
MbiI CCGCTC 1 cut(s) 825
MboI GATC 8 cut(s) 32, 122, 520, 1033, 1048, 1317, 1420, 1461
MflI RGATCY 4 cut(s) 122, 1048, 1317, 1420
MhlI GDGCHC 4 cut(s) 1020, 1126, 1372, 1415
MlsI TGGCCA 1 cut(s) 399
MluCI AATT 3 cut(s) 441, 653, 1511
MluNI TGGCCA 1 cut(s) 399
MlyI GAGTC 4 cut(s) 216, 356, 1244, 1280
Mox20I TGGCCA 1 cut(s) 399
MroI TCCGGA 1 cut(s) 670
MroXI GAANNNNTTC 5 cut(s) 279, 654, 657, 800, 1092
MscI TGGCCA 1 cut(s) 399
MseI TTAA 4 cut(s) 474, 494, 864, 1277
MslI CAYNNNNRTG 1 cut(s) 609
Msp20I TGGCCA 1 cut(s) 399
MspA1I CMGCKG 3 cut(s) 305, 311, 761
Mva1269I GAATGC 1 cut(s) 374
MvaI CCWGG 6 cut(s) 80, 374, 509, 833, 903, 1499
MvnI CGCG 3 cut(s) 53, 311, 1142
MwoI GCNNNNNNNGC 8 cut(s) 59, 425, 758, 822, 973, 1024, 1148, 1525
NdeII GATC 8 cut(s) 32, 122, 520, 1033, 1048, 1317, 1420, 1461
NheI GCTAGC 3 cut(s) 415, 1027, 1151
NlaIII CATG 6 cut(s) 103, 404, 599, 1205, 1435, 1468
NlaIV GGNNCC 4 cut(s) 315, 803, 830, 1496
NmuCI GTSAC 2 cut(s) 208, 346
NspI RCATGY 2 cut(s) 1205, 1435
PaeR7I CTCGAG 1 cut(s) 662
PagI TCATGA 1 cut(s) 1464
PctI GAATGC 1 cut(s) 374
PdmI GAANNNNTTC 5 cut(s) 279, 654, 657, 800, 1092
PfeI GAWTC 7 cut(s) 5, 185, 242, 667, 765, 1109, 1376
PflMI CCANNNNNTGG 1 cut(s) 926
PfoI TCCNGGA 2 cut(s) 251, 901
PkrI GCNGC 5 cut(s) 239, 307, 310, 1306, 1489
PleI GAGTC 4 cut(s) 215, 356, 1244, 1279
PpsI GAGTC 4 cut(s) 215, 356, 1244, 1279
Psp6I CCWGG 6 cut(s) 78, 372, 507, 831, 901, 1497
PspEI GGTNACC 2 cut(s) 841, 1288
PspGI CCWGG 6 cut(s) 78, 372, 507, 831, 901, 1497
PspN4I GGNNCC 4 cut(s) 315, 803, 830, 1496
PspPI GGNCC 3 cut(s) 427, 829, 905
PsuI RGATCY 4 cut(s) 122, 1048, 1317, 1420
PvuII CAGCTG 1 cut(s) 761
RsaI GTAC 9 cut(s) 94, 160, 456, 502, 530, 992, 1139, 1406, 1496
RsaNI GTAC 9 cut(s) 93, 159, 455, 501, 529, 991, 1138, 1405, 1495
RseI CAYNNNNRTG 1 cut(s) 609
SacII CCGCGG 1 cut(s) 312
SalI GTCGAC 1 cut(s) 1427
SaqAI TTAA 4 cut(s) 474, 494, 864, 1277
SatI GCNGC 5 cut(s) 238, 306, 309, 1305, 1488
Sau3AI GATC 8 cut(s) 32, 122, 520, 1033, 1048, 1317, 1420, 1461
Sau96I GGNCC 3 cut(s) 427, 829, 905
ScaI AGTACT 1 cut(s) 160
SchI GAGTC 4 cut(s) 216, 356, 1244, 1280
SduI GDGCHC 4 cut(s) 1020, 1126, 1372, 1415
SfaNI GCATC 2 cut(s) 325, 1138
SfcI CTRYAG 1 cut(s) 318
Sfr274I CTCGAG 1 cut(s) 662
Sfr303I CCGCGG 1 cut(s) 312
SgrBI CCGCGG 1 cut(s) 312
SinI GGWCC 2 cut(s) 829, 905
SlaI CTCGAG 1 cut(s) 662
SmaI CCCGGG 1 cut(s) 1373
SmiMI CAYNNNNRTG 1 cut(s) 609
SmlI CTYRAG 2 cut(s) 662, 1328
SmoI CTYRAG 2 cut(s) 662, 1328
SpeI ACTAGT 1 cut(s) 952
Sse9I AATT 3 cut(s) 441, 653, 1511
SspMI CTAG 7 cut(s) 132, 416, 953, 1028, 1052, 1152, 1344
TaaI ACNGT 3 cut(s) 322, 915, 981
TaiI ACGT 4 cut(s) 506, 687, 864, 1137
TaqI TCGA 6 cut(s) 539, 546, 663, 768, 856, 1428
TaqII GACCGA 1 cut(s) 922
TasI AATT 3 cut(s) 441, 653, 1511
TatI WGTACW 2 cut(s) 92, 158
TauI GCSGC 2 cut(s) 311, 1307
TfiI GAWTC 7 cut(s) 5, 185, 242, 667, 765, 1109, 1376
Tru1I TTAA 4 cut(s) 474, 494, 864, 1277
Tru9I TTAA 4 cut(s) 474, 494, 864, 1277
TscAI CASTG 2 cut(s) 457, 856
TseFI GTSAC 2 cut(s) 208, 346
TseI GCWGC 3 cut(s) 237, 305, 1487
Tsp45I GTSAC 2 cut(s) 208, 346
TspDTI ATGAA 5 cut(s) 690, 1085, 1277, 1481, 1518
TspMI CCCGGG 1 cut(s) 1371
TspRI CASTG 2 cut(s) 457, 856
Van91I CCANNNNNTGG 1 cut(s) 926
VneI GTGCAC 1 cut(s) 1016
VpaK11BI GGWCC 2 cut(s) 829, 905
XapI RAATTY 2 cut(s) 653, 1511
XbaI TCTAGA 1 cut(s) 1051
XceI RCATGY 2 cut(s) 1205, 1435
XhoI CTCGAG 1 cut(s) 662
XmaI CCCGGG 1 cut(s) 1371
XmiI GTMKAC 1 cut(s) 1428
XmnI GAANNNNTTC 5 cut(s) 279, 654, 657, 800, 1092
XspI CTAG 7 cut(s) 132, 416, 953, 1028, 1052, 1152, 1344
ZrmI AGTACT 1 cut(s) 160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.