Rmu_sc0011203.1_g000010

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011203.1
OG0000087
Physical Location & Seq
Reverse (-)
21119 .. 22841
1723 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011203.1_g000010.1.cds

Sequence Viewer

Length: 1464 bp
atgggtgtctctgcacgagaactagctccaccaagggctatcgctacctctgcaccggtgcctacagtatctcctgcggatgatgaacctgccaccggggcagttgaccctaaacgcctggcgacaaattttgagtatgatggccacgtgggacttgtgccagcaagggagccccttgttaccgatatacctacttcaatgagcaagaggtggaggaataaagtgtttctcgctgggggacattggaagattaggaataagaaatggtacctaacaggtacctttcaggccatatgggatcagtcttactcaatgtccgaggtcaagagaaaacggatagcccggctatacactgtatgggtaaaagtgccgaagaggaaaccccggaaaggcaatgaagatgacaagatgaatgacaacttgctgatggatatgctcatgagccaaggagaagatgccctgaatattgatgtcgatctctcgttgacggctatgggacgctcgattgatgagatgctccttgagatctatgacgacgggtacgggcaccctgttcctaaagcccccgttacccaaagtgaccagcctcttgcaggggagattgtcactattgctgataccggaagaggaaagacgccggtgtctggctctatatcttctctatctttcgggtcagcagggagcgaggaagctttgctgcctggtgagaagaagaggcaacataagcaccgccatcgaagcgggaacaaggaggacgttacctacactggaagggacgttaagggggcggagcctaagaggcaaaagaaaaatcctccgagaccggaagcctcgcagtggctagggctcttgtccctggccattccaatagtccccaagaaacccatcaagcaattgttgagccagtacgggttcgctgatgagaagttcgtacgctctatgctcgccgatttgaaggatatagatctcgatcgggtgtgggcaaaggacaatacctcgcaagagaatcgtccccttgcccgggagtcaatgatgtgggtacgggacccactttacccttgttttacaactttgtaccttttctgtgctaacgggtgtttgcaggcaatattcaatgtgtacgcaattgatgccagcgaggaagatacgcacttgaatgaggaggttacaagtctctccaggcaggtgacatatcttcatggggagaagtccaagctggagaaggagcgggaatccttaaagaagaagatcgagtccttgactccgatggttaccgagctggaagcggtgaagcaacgaatcgcggagcttgaaggccaaatgtctgaggcgagggatgaggtgaagagtgcccgggactctgagaaagaagctgctgaatctgccaaatcgtggaaggcgagggcagatcatctggaggagcgccttcccgtggagagccacgagaccgtgggggagtactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

487

Amino Acids

54.69

Weight (kDa)

6.6

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1174
AasI GACNNNNNNGTC 1 cut(s) 640
Acc36I ACCTGC 2 cut(s) 97, 1174
Acc65I GGTACC 2 cut(s) 267, 278
AccB1I GGYRCC 4 cut(s) 58, 267, 278, 546
AccB7I CCANNNNNTGG 1 cut(s) 1392
AccBSI CCGCTC 1 cut(s) 1228
AccII CGCG 1 cut(s) 1304
AciI CCGC 7 cut(s) 77, 730, 741, 788, 1228, 1286, 1304
AclWI GGATC 1 cut(s) 306
AcoI YGGCCR 2 cut(s) 142, 858
AcsI RAATTY 1 cut(s) 127
AcvI CACGTG 1 cut(s) 148
AcyI GRCGYC 1 cut(s) 635
AfaI GTAC 9 cut(s) 269, 280, 542, 908, 933, 1041, 1076, 1121, 1460
AfiI CCNNNNNNNGG 9 cut(s) 95, 389, 593, 644, 837, 1020, 1021, 1392, 1432
AgeI ACCGGT 1 cut(s) 55
AgsI TTSAA 5 cut(s) 198, 955, 1114, 1156, 1313
AjnI CCWGG 4 cut(s) 117, 700, 855, 1178
AluBI AGCT 6 cut(s) 26, 692, 1216, 1279, 1309, 1373
AluI AGCT 6 cut(s) 26, 692, 1216, 1279, 1309, 1373
Alw26I GTCTC 4 cut(s) 13, 814, 1178, 1439
AlwI GGATC 1 cut(s) 306
Ama87I CYCGRG 2 cut(s) 1020, 1353
AoxI GGCC 4 cut(s) 142, 288, 858, 1315
ApeKI GCWGC 2 cut(s) 697, 1373
ApoI RAATTY 1 cut(s) 127
AsiGI ACCGGT 1 cut(s) 55
Asp718I GGTACC 2 cut(s) 267, 278
AspLEI GCGC 1 cut(s) 1425
AspS9I GGNCC 1 cut(s) 1045
AsuC2I CCSGG 7 cut(s) 97, 343, 385, 1021, 1022, 1354, 1355
AsuHPI GGTGA 4 cut(s) 716, 1198, 1300, 1354
AvaI CYCGRG 2 cut(s) 1020, 1353
AvaII GGWCC 1 cut(s) 1045
BaeGI GKGCMC 2 cut(s) 549, 1354
BalI TGGCCA 2 cut(s) 144, 860
BanI GGYRCC 4 cut(s) 58, 267, 278, 546
BanII GRGCYC 2 cut(s) 174, 849
BauI CACGAG 2 cut(s) 15, 1442
BbrPI CACGTG 1 cut(s) 148
BbvI GCAGC 2 cut(s) 684, 1360
BccI CCATC 5 cut(s) 134, 421, 741, 893, 1261
BceAI ACGGC 1 cut(s) 504
BcgI CGANNNNNNTGC 4 cut(s) 716, 750, 989, 1023
BciT130I CCWGG 4 cut(s) 119, 702, 857, 1180
BcnI CCSGG 7 cut(s) 97, 343, 385, 1021, 1022, 1354, 1355
BcoDI GTCTC 4 cut(s) 13, 814, 1178, 1439
BfaI CTAG 3 cut(s) 23, 842, 1462
BfmI CTRYAG 1 cut(s) 63
BfoI RGCGCY 1 cut(s) 1426
BfuAI ACCTGC 2 cut(s) 97, 1174
BglI GCCNNNNNGGC 2 cut(s) 98, 799
BglII AGATCT 2 cut(s) 525, 964
BisI GCNGC 2 cut(s) 698, 1374
BlsI GCNGC 2 cut(s) 699, 1375
BmcAI AGTACT 1 cut(s) 1460
Bme18I GGWCC 1 cut(s) 1045
BmeT110I CYCGRG 2 cut(s) 1020, 1353
BmgT120I GGNCC 1 cut(s) 1045
BmiI GGNNCC 8 cut(s) 60, 171, 269, 280, 548, 792, 1046, 1047
BmsI GCATC 3 cut(s) 445, 504, 1120
BpmI CTGGAG 3 cut(s) 1162, 1238, 1436
BpuEI CTTGAG 1 cut(s) 542
BpuMI CCSGG 7 cut(s) 97, 343, 385, 1021, 1022, 1354, 1355
BsaAI YACGTR 1 cut(s) 148
BsaBI GATNNNNATC 3 cut(s) 474, 963, 969
BsaHI GRCGYC 1 cut(s) 635
BsaI GGTCTC 2 cut(s) 814, 1439
BsaWI WCCGGW 3 cut(s) 55, 620, 823
BsaXI ACNNNNNCTCC 2 cut(s) 55, 85
Bsc4I CCNNNNNNNGG 9 cut(s) 95, 389, 593, 644, 837, 1020, 1021, 1392, 1432
Bse118I RCCGGY 2 cut(s) 55, 637
Bse1I ACTGG 2 cut(s) 772, 904
Bse3DI GCAATG 1 cut(s) 400
Bse8I GATNNNNATC 3 cut(s) 474, 963, 969
BseBI CCWGG 4 cut(s) 119, 702, 857, 1180
BseGI GGATG 2 cut(s) 85, 1342
BseJI GATNNNNATC 3 cut(s) 474, 963, 969
BseLI CCNNNNNNNGG 9 cut(s) 95, 389, 593, 644, 837, 1020, 1021, 1392, 1432
BseMI GCAATG 1 cut(s) 400
BseMII CTCAG 2 cut(s) 1317, 1353
BseNI ACTGG 2 cut(s) 772, 904
BseRI GAGGAG 2 cut(s) 1175, 1433
BseSI GKGCMC 2 cut(s) 549, 1354
BseXI GCAGC 2 cut(s) 684, 1360
BseYI CCCAGC 1 cut(s) 233
BsgI GTGCAG 1 cut(s) 36
Bsh1236I CGCG 1 cut(s) 1304
Bsh1285I CGRYCG 1 cut(s) 973
BshFI GGCC 4 cut(s) 144, 290, 860, 1317
BshNI GGYRCC 4 cut(s) 58, 267, 278, 546
BshTI ACCGGT 1 cut(s) 55
BsiEI CGRYCG 1 cut(s) 973
BsiHKCI CYCGRG 2 cut(s) 1020, 1353
BsiSI CCGG 9 cut(s) 56, 96, 343, 385, 621, 638, 824, 1021, 1354
BsiWI CGTACG 1 cut(s) 931
BslFI GGGAC 9 cut(s) 165, 252, 510, 788, 838, 857, 996, 1058, 1370
BslI CCNNNNNNNGG 9 cut(s) 95, 389, 593, 644, 837, 1020, 1021, 1392, 1432
BsmAI GTCTC 4 cut(s) 13, 814, 1178, 1439
BsmFI GGGAC 9 cut(s) 165, 252, 510, 788, 838, 857, 996, 1058, 1370
BsnI GGCC 4 cut(s) 144, 290, 860, 1317
Bso31I GGTCTC 2 cut(s) 814, 1439
BsoBI CYCGRG 2 cut(s) 1020, 1353
Bsp1286I GDGCHC 4 cut(s) 174, 549, 849, 1354
Bsp143I GATC 7 cut(s) 298, 475, 525, 964, 970, 1248, 1408
BspACI CCGC 7 cut(s) 77, 730, 741, 788, 1228, 1286, 1304
BspANI GGCC 4 cut(s) 144, 290, 860, 1317
BspCNI CTCAG 2 cut(s) 1318, 1354
BspFNI CGCG 1 cut(s) 1304
BspHI TCATGA 1 cut(s) 438
BspLI GGNNCC 8 cut(s) 60, 171, 269, 280, 548, 792, 1046, 1047
BspMI ACCTGC 2 cut(s) 97, 1174
BspPI GGATC 1 cut(s) 306
BspT107I GGYRCC 4 cut(s) 58, 267, 278, 546
BspTNI GGTCTC 2 cut(s) 814, 1439
BsrBI CCGCTC 1 cut(s) 1228
BsrDI GCAATG 1 cut(s) 400
BsrFI RCCGGY 2 cut(s) 55, 637
BsrI ACTGG 2 cut(s) 772, 904
BssAI RCCGGY 2 cut(s) 55, 637
BssMI GATC 7 cut(s) 298, 475, 525, 964, 970, 1248, 1408
BssNI GRCGYC 1 cut(s) 635
BssSI CACGAG 2 cut(s) 15, 1442
BssT1I CCWWGG 2 cut(s) 32, 445
Bst2BI CACGAG 2 cut(s) 15, 1442
Bst2UI CCWGG 4 cut(s) 119, 702, 857, 1180
Bst4CI ACNGT 3 cut(s) 67, 355, 1450
Bst6I CTCTTC 4 cut(s) 368, 619, 707, 1340
BstACI GRCGYC 1 cut(s) 635
BstAPI GCANNNNNTGC 1 cut(s) 1130
BstBAI YACGTR 1 cut(s) 148
BstC8I GCNNGC 4 cut(s) 162, 945, 1104, 1135
BstDEI CTNAG 3 cut(s) 795, 1326, 1362
BstDSI CCRYGG 2 cut(s) 1431, 1449
BstEII GGTNACC 1 cut(s) 1270
BstENI CCTNNNNNAGG 1 cut(s) 591
BstF5I GGATG 2 cut(s) 85, 1342
BstFNI CGCG 1 cut(s) 1304
BstH2I RGCGCY 1 cut(s) 1426
BstHHI GCGC 1 cut(s) 1425
BstKTI GATC 7 cut(s) 301, 478, 528, 967, 973, 1251, 1411
BstMAI GTCTC 4 cut(s) 13, 814, 1178, 1439
BstMBI GATC 7 cut(s) 298, 475, 525, 964, 970, 1248, 1408
BstMCI CGRYCG 1 cut(s) 973
BstMWI GCNNNNNNNGC 7 cut(s) 50, 98, 724, 738, 799, 1130, 1382
BstNI CCWGG 4 cut(s) 119, 702, 857, 1180
BstPI GGTNACC 1 cut(s) 1270
BstSFI CTRYAG 1 cut(s) 63
BstSLI GKGCMC 2 cut(s) 549, 1354
BstUI CGCG 1 cut(s) 1304
BstV1I GCAGC 2 cut(s) 684, 1360
BstX2I RGATCY 2 cut(s) 525, 964
BstYI RGATCY 2 cut(s) 525, 964
BsuRI GGCC 4 cut(s) 144, 290, 860, 1317
BtgI CCRYGG 2 cut(s) 1431, 1449
BtsCI GGATG 2 cut(s) 85, 1342
BtsI GCAGTG 1 cut(s) 842
BtsIMutI CAGTG 3 cut(s) 351, 765, 842
BveI ACCTGC 2 cut(s) 97, 1174
Cac8I GCNNGC 4 cut(s) 162, 945, 1104, 1135
CciI TCATGA 1 cut(s) 438
CfoI GCGC 1 cut(s) 1425
Cfr10I RCCGGY 2 cut(s) 55, 637
Cfr13I GGNCC 1 cut(s) 1045
Cfr9I CCCGGG 2 cut(s) 1020, 1353
CseI GACGC 2 cut(s) 507, 643
Csp6I GTAC 9 cut(s) 268, 279, 541, 907, 932, 1040, 1075, 1120, 1459
CspAI ACCGGT 1 cut(s) 55
CviAII CATG 2 cut(s) 439, 1199
CviQI GTAC 9 cut(s) 268, 279, 541, 907, 932, 1040, 1075, 1120, 1459
DdeI CTNAG 3 cut(s) 795, 1326, 1362
DpnI GATC 7 cut(s) 300, 477, 527, 966, 972, 1250, 1410
DpnII GATC 7 cut(s) 298, 475, 525, 964, 970, 1248, 1408
DrdI GACNNNNNNGTC 1 cut(s) 640
DseDI GACNNNNNNGTC 1 cut(s) 640
EaeI YGGCCR 2 cut(s) 142, 858
Eam1104I CTCTTC 4 cut(s) 368, 619, 707, 1340
EarI CTCTTC 4 cut(s) 368, 619, 707, 1340
EciI GGCGGA 1 cut(s) 803
Eco130I CCWWGG 2 cut(s) 32, 445
Eco24I GRGCYC 2 cut(s) 174, 849
Eco31I GGTCTC 2 cut(s) 814, 1439
Eco47I GGWCC 1 cut(s) 1045
Eco72I CACGTG 1 cut(s) 148
Eco88I CYCGRG 2 cut(s) 1020, 1353
Eco91I GGTNACC 1 cut(s) 1270
EcoNI CCTNNNNNAGG 1 cut(s) 591
EcoO109I RGGNCCY 1 cut(s) 1045
EcoO65I GGTNACC 1 cut(s) 1270
EcoRII CCWGG 4 cut(s) 117, 700, 855, 1178
EcoT14I CCWWGG 2 cut(s) 32, 445
EcoT38I GRGCYC 2 cut(s) 174, 849
ErhI CCWWGG 2 cut(s) 32, 445
FaeI CATG 2 cut(s) 442, 1202
FaqI GGGAC 9 cut(s) 165, 252, 510, 788, 838, 857, 996, 1058, 1370
FatI CATG 2 cut(s) 438, 1198
FauI CCCGC 2 cut(s) 734, 1221
FauNDI CATATG 1 cut(s) 293
Fnu4HI GCNGC 2 cut(s) 698, 1374
FokI GGATG 2 cut(s) 92, 1349
FriOI GRGCYC 2 cut(s) 174, 849
Fsp4HI GCNGC 2 cut(s) 698, 1374
FspBI CTAG 3 cut(s) 23, 842, 1462
GlaI GCGC 1 cut(s) 1424
GluI GCNGC 2 cut(s) 698, 1374
GsaI CCCAGC 1 cut(s) 237
GsuI CTGGAG 3 cut(s) 1162, 1238, 1436
HaeII RGCGCY 1 cut(s) 1426
HaeIII GGCC 4 cut(s) 144, 290, 860, 1317
HapII CCGG 9 cut(s) 56, 96, 343, 385, 621, 638, 824, 1021, 1354
HgaI GACGC 2 cut(s) 507, 643
HhaI GCGC 1 cut(s) 1425
Hin1I GRCGYC 1 cut(s) 635
Hin1II CATG 2 cut(s) 442, 1202
Hin6I GCGC 1 cut(s) 1423
HinP1I GCGC 1 cut(s) 1423
HincII GTYRAC 2 cut(s) 106, 486
HindII GTYRAC 2 cut(s) 106, 486
HindIII AAGCTT 1 cut(s) 690
HinfI GANTC 8 cut(s) 1006, 1025, 1232, 1253, 1261, 1299, 1358, 1379
HpaII CCGG 9 cut(s) 56, 96, 343, 385, 621, 638, 824, 1021, 1354
HphI GGTGA 4 cut(s) 716, 1198, 1300, 1354
Hpy166II GTNNAC 3 cut(s) 106, 486, 1120
Hpy188I TCNGA 5 cut(s) 319, 819, 1266, 1327, 1363
Hpy188III TCNNGA 4 cut(s) 325, 439, 968, 1415
Hpy8I GTNNAC 3 cut(s) 106, 486, 1120
Hpy99I CGWCG 1 cut(s) 539
HpyAV CCTTC 6 cut(s) 765, 949, 1216, 1307, 1390, 1436
HpyCH4III ACNGT 3 cut(s) 67, 355, 1450
HpyCH4IV ACGT 3 cut(s) 147, 756, 777
HpyCH4V TGCA 4 cut(s) 14, 53, 593, 1102
HpyF10VI GCNNNNNNNGC 7 cut(s) 50, 98, 724, 738, 799, 1130, 1382
HpyF3I CTNAG 3 cut(s) 795, 1326, 1362
HpySE526I ACGT 3 cut(s) 147, 756, 777
Hsp92I GRCGYC 1 cut(s) 635
Hsp92II CATG 2 cut(s) 442, 1202
HspAI GCGC 1 cut(s) 1423
KflI GGGWCCC 1 cut(s) 1045
KpnI GGTACC 2 cut(s) 271, 282
Kzo9I GATC 7 cut(s) 298, 475, 525, 964, 970, 1248, 1408
LmnI GCTCC 8 cut(s) 31, 169, 522, 681, 790, 1225, 1306, 1420
Lsp1109I GCAGC 2 cut(s) 684, 1360
LweI GCATC 3 cut(s) 445, 504, 1120
MaeI CTAG 3 cut(s) 23, 842, 1462
MaeII ACGT 3 cut(s) 147, 756, 777
MaeIII GTNAC 8 cut(s) 178, 568, 578, 604, 757, 1165, 1186, 1270
MalI GATC 7 cut(s) 300, 477, 527, 966, 972, 1250, 1410
MbiI CCGCTC 1 cut(s) 1228
MboI GATC 7 cut(s) 298, 475, 525, 964, 970, 1248, 1408
MfeI CAATTG 2 cut(s) 893, 1125
MflI RGATCY 2 cut(s) 525, 964
MhlI GDGCHC 4 cut(s) 174, 549, 849, 1354
MlsI TGGCCA 2 cut(s) 144, 860
MluCI AATT 3 cut(s) 127, 893, 1125
MluNI TGGCCA 2 cut(s) 144, 860
MlyI GAGTC 4 cut(s) 1034, 1255, 1262, 1352
Mox20I TGGCCA 2 cut(s) 144, 860
MscI TGGCCA 2 cut(s) 144, 860
MseI TTAA 2 cut(s) 780, 1238
MslI CAYNNNNRTG 1 cut(s) 1155
Msp20I TGGCCA 2 cut(s) 144, 860
MspI CCGG 9 cut(s) 56, 96, 343, 385, 621, 638, 824, 1021, 1354
MunI CAATTG 2 cut(s) 893, 1125
MvaI CCWGG 4 cut(s) 119, 702, 857, 1180
MvnI CGCG 1 cut(s) 1304
MwoI GCNNNNNNNGC 7 cut(s) 50, 98, 724, 738, 799, 1130, 1382
NciI CCSGG 7 cut(s) 97, 343, 385, 1021, 1022, 1354, 1355
NdeI CATATG 1 cut(s) 293
NdeII GATC 7 cut(s) 298, 475, 525, 964, 970, 1248, 1408
NlaIII CATG 2 cut(s) 442, 1202
NlaIV GGNNCC 8 cut(s) 60, 171, 269, 280, 548, 792, 1046, 1047
NmuCI GTSAC 3 cut(s) 578, 604, 1186
PagI TCATGA 1 cut(s) 438
PaqCI CACCTGC 1 cut(s) 1174
PcsI WCGNNNNNNNCGW 1 cut(s) 1397
PfeI GAWTC 4 cut(s) 1006, 1232, 1299, 1379
Pfl23II CGTACG 1 cut(s) 931
PflMI CCANNNNNTGG 1 cut(s) 1392
PinAI ACCGGT 1 cut(s) 55
PkrI GCNGC 2 cut(s) 699, 1375
Ple19I CGATCG 1 cut(s) 973
PleI GAGTC 4 cut(s) 1033, 1255, 1261, 1352
PmaCI CACGTG 1 cut(s) 148
PmlI CACGTG 1 cut(s) 148
PpsI GAGTC 4 cut(s) 1033, 1255, 1261, 1352
Ppu21I YACGTR 1 cut(s) 148
PpuMI RGGWCCY 1 cut(s) 1045
Psp5II RGGWCCY 1 cut(s) 1045
Psp6I CCWGG 4 cut(s) 117, 700, 855, 1178
PspCI CACGTG 1 cut(s) 148
PspEI GGTNACC 1 cut(s) 1270
PspFI CCCAGC 1 cut(s) 233
PspGI CCWGG 4 cut(s) 117, 700, 855, 1178
PspLI CGTACG 1 cut(s) 931
PspN4I GGNNCC 8 cut(s) 60, 171, 269, 280, 548, 792, 1046, 1047
PspPI GGNCC 1 cut(s) 1045
PspPPI RGGWCCY 1 cut(s) 1045
PsuI RGATCY 2 cut(s) 525, 964
PvuI CGATCG 1 cut(s) 973
RsaI GTAC 9 cut(s) 269, 280, 542, 908, 933, 1041, 1076, 1121, 1460
RsaNI GTAC 9 cut(s) 268, 279, 541, 907, 932, 1040, 1075, 1120, 1459
RseI CAYNNNNRTG 1 cut(s) 1155
SaqAI TTAA 2 cut(s) 780, 1238
SatI GCNGC 2 cut(s) 698, 1374
Sau3AI GATC 7 cut(s) 298, 475, 525, 964, 970, 1248, 1408
Sau96I GGNCC 1 cut(s) 1045
ScaI AGTACT 1 cut(s) 1460
SchI GAGTC 4 cut(s) 1034, 1255, 1262, 1352
SduI GDGCHC 4 cut(s) 174, 549, 849, 1354
SfaNI GCATC 3 cut(s) 445, 504, 1120
SfcI CTRYAG 1 cut(s) 63
SgrAI CRCCGGYG 2 cut(s) 55, 637
SinI GGWCC 1 cut(s) 1045
SmaI CCCGGG 2 cut(s) 1022, 1355
SmiMI CAYNNNNRTG 1 cut(s) 1155
SmlI CTYRAG 1 cut(s) 521
SmoI CTYRAG 1 cut(s) 521
Sse9I AATT 3 cut(s) 127, 893, 1125
SsiI CCGC 7 cut(s) 77, 730, 741, 788, 1228, 1286, 1304
SspI AATATT 2 cut(s) 466, 1110
SspMI CTAG 3 cut(s) 23, 842, 1462
StyI CCWWGG 2 cut(s) 32, 445
TaaI ACNGT 3 cut(s) 67, 355, 1450
TaiI ACGT 3 cut(s) 150, 759, 780
TaqI TCGA 5 cut(s) 474, 503, 736, 969, 1251
TasI AATT 3 cut(s) 127, 893, 1125
TatI WGTACW 1 cut(s) 1458
TfiI GAWTC 4 cut(s) 1006, 1232, 1299, 1379
Tru1I TTAA 2 cut(s) 780, 1238
Tru9I TTAA 2 cut(s) 780, 1238
TscAI CASTG 3 cut(s) 358, 772, 842
TseFI GTSAC 3 cut(s) 578, 604, 1186
TseI GCWGC 2 cut(s) 697, 1373
Tsp45I GTSAC 3 cut(s) 578, 604, 1186
TspDTI ATGAA 4 cut(s) 99, 411, 425, 1187
TspGWI ACGGA 1 cut(s) 349
TspMI CCCGGG 2 cut(s) 1020, 1353
TspRI CASTG 3 cut(s) 358, 772, 842
Van91I CCANNNNNTGG 1 cut(s) 1392
VpaK11BI GGWCC 1 cut(s) 1045
XagI CCTNNNNNAGG 1 cut(s) 591
XapI RAATTY 1 cut(s) 127
XmaI CCCGGG 2 cut(s) 1020, 1353
XspI CTAG 3 cut(s) 23, 842, 1462
ZrmI AGTACT 1 cut(s) 1460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.