Rmu_sc0000276.1_g000021

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000276.1
OG0000087
Physical Location & Seq
Reverse (-)
87302 .. 89329
2028 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000276.1_g000021.1.cds

Sequence Viewer

Length: 1662 bp
atggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggatatcgatcggtacttaggccgagtagatcaatttgcagagaacacgggatcctcgactggggtgttctcggagagcagtgaggagtccgacgagggtgagagcgagggtggatctgcggaggccccggtagtcacggtggcaattcccgagggcataccgaagcctaggtatgcacttgcggacgggaccatatgcgacaaacccgggagaagtatgacaatgaatgagatcatcgccatgcgactgaggtggggaataccggacgaggtggagcttaggcctctcagggatggagagcttgccggaatcctgcctcggggtgggtggcgctgcacgagaatcagttccaccaagggttatcgctaccgctgccccggtgcctacactagggattacgaaccactagttaccgacatgccttcctcgatgagcaaaaggtggaggaacaaagtattcctagttggggggcggtggcaaattaaaaataagaagtggcagttgaccggtaccttccaagctatcggggaccagtcctatactctatctgaagtcgaaaggaagaggatagcccgggtatatgccgtttggtcagagaaagagaggagctcttatagattcatccggcactctatactttataggctagggctagggtggctccccgtgaaagcaccgaagaggaaaccccggaaaggcaaaaaggaagacagaatggatgatgctcagttgatggatatgctgatgggccagggggaagacgcccttcacatcgatgtcgacctagggtcgaaaggtacgagtcggtccgttgaagagaccttactggagatcaccgatgagggatatggggaacctgatcctgacgctcccgtgacccaagtcgtgcagccctctgttgccgatgtcatcacgatagatgataccgggacgaggaaggtaccggtccccgtgtctatttcctctcgctccgctgggagcgatgaggcattgcttcctggtgagaagaaaagatcccataggcaccggcatcaaagtgataagcaggaggtgacgtatactggccgggatgttcagggtttcgatgcgaagagacagaagaaagatcactcgggaccagagtcgtcgccttcgcttggcttattgtctccttcccttccggtgatccccaagaagcccatcaagcaactgttgagtgagtacagggttgccgatgaaaagttcgtgcagtccatgcttggtgacctgaaggacattgacctcgaccgggtgcgggccaaggatagtacgccccaagaaaatcgccgtcttgcccgggaatccatgatgcgggcactcttcaatgtgtacacgattgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatctccatggcgagaaggccaagctggagaaggagcgagactcattgaaggttgagatggccgcagctaagcagcggatcgcggagcttgagggtgaagtctctgaggcgcgggaagaggtgaaaaatgctcgggactccgagaaaaaagctacagagtctgccgtgtcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

553

Amino Acids

61.81

Weight (kDa)

6.21

Isoelectric Point (pI)

48.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1471
Acc36I ACCTGC 1 cut(s) 1471
Acc65I GGTACC 2 cut(s) 578, 1009
AccB1I GGYRCC 4 cut(s) 449, 578, 1009, 1092
AccI GTMKAC 2 cut(s) 849, 1127
AccII CGCG 2 cut(s) 1571, 1600
AclWI GGATC 8 cut(s) 40, 114, 127, 190, 923, 1077, 1228, 1574
AcoI YGGCCR 2 cut(s) 1132, 1548
AcuI CTGAAG 4 cut(s) 84, 639, 1337, 1472
AcyI GRCGYC 2 cut(s) 831, 1428
AfaI GTAC 8 cut(s) 41, 83, 580, 868, 1011, 1271, 1357, 1418
AgeI ACCGGT 2 cut(s) 575, 1012
AgsI TTSAA 3 cut(s) 884, 1411, 1537
AhdI GACNNNNNGTC 1 cut(s) 856
AhlI ACTAGT 1 cut(s) 475
AjnI CCWGG 4 cut(s) 14, 53, 819, 1066
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
AluBI AGCT 9 cut(s) 62, 346, 370, 590, 678, 1513, 1556, 1576, 1640
AluI AGCT 9 cut(s) 62, 346, 370, 590, 678, 1513, 1556, 1576, 1640
Alw21I GWGCWC 1 cut(s) 680
Alw26I GTCTC 5 cut(s) 881, 1156, 1221, 1521, 1594
AlwI GGATC 8 cut(s) 40, 114, 127, 190, 923, 1077, 1228, 1574
AlwNI CAGNNNCTG 1 cut(s) 1649
Ama87I CYCGRG 7 cut(s) 218, 275, 387, 642, 1180, 1383, 1620
AoxI GGCC 8 cut(s) 88, 192, 350, 817, 1132, 1344, 1506, 1548
ApeKI GCWGC 5 cut(s) 402, 441, 958, 1553, 1561
AsiGI ACCGGT 2 cut(s) 575, 1012
Asp700I GAANNNNTTC 1 cut(s) 415
Asp718I GGTACC 2 cut(s) 578, 1009
AspA2I CCTAGG 2 cut(s) 236, 853
AspLEI GCGC 2 cut(s) 402, 1600
AspS9I GGNCC 8 cut(s) 193, 258, 598, 817, 876, 1015, 1184, 1344
AsuHPI GGTGA 9 cut(s) 179, 895, 1082, 1132, 1243, 1322, 1495, 1595, 1621
AvaI CYCGRG 7 cut(s) 218, 275, 387, 642, 1180, 1383, 1620
AvaII GGWCC 5 cut(s) 258, 598, 876, 1015, 1184
AvrII CCTAGG 2 cut(s) 236, 853
BaeGI GKGCMC 1 cut(s) 1405
BamHI GGATCC 1 cut(s) 119
BanI GGYRCC 4 cut(s) 449, 578, 1009, 1092
BanII GRGCYC 1 cut(s) 680
BarI GAAGNNNNNNTAC 2 cut(s) 876, 908
BauI CACGAG 1 cut(s) 406
BbsI GAAGAC 3 cut(s) 39, 783, 834
Bbv12I GWGCWC 1 cut(s) 680
BbvI GCAGC 5 cut(s) 389, 428, 970, 1565, 1573
BccI CCATC 5 cut(s) 356, 796, 808, 1256, 1540
BceAI ACGGC 3 cut(s) 638, 1359, 1637
BciT130I CCWGG 4 cut(s) 16, 55, 821, 1068
BciVI GTATCC 1 cut(s) 19
BcoDI GTCTC 5 cut(s) 881, 1156, 1221, 1521, 1594
BcuI ACTAGT 1 cut(s) 475
BfaI CTAG 7 cut(s) 237, 459, 476, 530, 716, 722, 854
BfmI CTRYAG 1 cut(s) 1641
BfoI RGCGCY 1 cut(s) 403
BfuAI ACCTGC 1 cut(s) 1471
BfuI GTATCC 1 cut(s) 19
BisI GCNGC 6 cut(s) 403, 442, 959, 1551, 1554, 1562
BlnI CCTAGG 2 cut(s) 236, 853
BlpI GCTNAGC 1 cut(s) 1557
BlsI GCNGC 6 cut(s) 404, 443, 960, 1552, 1555, 1563
Bme18I GGWCC 5 cut(s) 258, 598, 876, 1015, 1184
BmeRI GACNNNNNGTC 1 cut(s) 856
BmeT110I CYCGRG 7 cut(s) 218, 275, 387, 642, 1180, 1383, 1620
BmgT120I GGNCC 8 cut(s) 193, 258, 598, 817, 876, 1015, 1184, 1344
BmrI ACTGGG 1 cut(s) 138
BmsI GCATC 4 cut(s) 781, 1108, 1144, 1386
BmuI ACTGGG 1 cut(s) 138
BoxI GACNNNNGTC 2 cut(s) 950, 1189
BpiI GAAGAC 3 cut(s) 39, 783, 834
BplI GAGNNNNNCTC 4 cut(s) 662, 694, 1514, 1546
BpmI CTGGAG 2 cut(s) 917, 1535
Bpu10I CCTNAGC 1 cut(s) 347
Bpu1102I GCTNAGC 1 cut(s) 1557
BpuEI CTTGAG 1 cut(s) 1598
Bsa29I ATCGAT 2 cut(s) 75, 843
BsaBI GATNNNNATC 2 cut(s) 75, 1446
BsaHI GRCGYC 2 cut(s) 831, 1428
BsaI GGTCTC 1 cut(s) 881
BsaWI WCCGGW 4 cut(s) 331, 575, 1012, 1228
BsaXI ACNNNNNCTCC 2 cut(s) 1109, 1139
Bse118I RCCGGY 3 cut(s) 575, 1012, 1095
Bse1I ACTGG 5 cut(s) 43, 133, 601, 900, 1135
Bse3DI GCAATG 1 cut(s) 1058
Bse8I GATNNNNATC 2 cut(s) 75, 1446
BseBI CCWGG 4 cut(s) 16, 55, 821, 1068
BseCI ATCGAT 2 cut(s) 75, 843
BseGI GGATG 4 cut(s) 367, 690, 793, 1144
BseJI GATNNNNATC 2 cut(s) 75, 1446
BseMI GCAATG 1 cut(s) 1058
BseMII CTCAG 4 cut(s) 308, 370, 809, 1584
BseNI ACTGG 5 cut(s) 43, 133, 601, 900, 1135
BseRI GAGGAG 3 cut(s) 167, 688, 1472
BseSI GKGCMC 1 cut(s) 1405
BseXI GCAGC 5 cut(s) 389, 428, 970, 1565, 1573
BseYI CCCAGC 1 cut(s) 1043
BsgI GTGCAG 3 cut(s) 388, 977, 1316
Bsh1236I CGCG 2 cut(s) 1571, 1600
Bsh1285I CGRYCG 2 cut(s) 79, 1336
BshFI GGCC 8 cut(s) 90, 194, 352, 819, 1134, 1346, 1508, 1550
BshNI GGYRCC 4 cut(s) 449, 578, 1009, 1092
BshTI ACCGGT 2 cut(s) 575, 1012
BshVI ATCGAT 2 cut(s) 75, 843
BsiEI CGRYCG 2 cut(s) 79, 1336
BsiHKAI GWGCWC 1 cut(s) 680
BsiHKCI CYCGRG 7 cut(s) 218, 275, 387, 642, 1180, 1383, 1620
BslFI GGGAC 6 cut(s) 271, 611, 1001, 1012, 1197, 1637
BsmAI GTCTC 5 cut(s) 881, 1156, 1221, 1521, 1594
BsmFI GGGAC 6 cut(s) 271, 611, 1001, 1012, 1197, 1637
BsnI GGCC 8 cut(s) 90, 194, 352, 819, 1134, 1346, 1508, 1550
Bso31I GGTCTC 1 cut(s) 881
BsoBI CYCGRG 7 cut(s) 218, 275, 387, 642, 1180, 1383, 1620
Bsp1286I GDGCHC 2 cut(s) 680, 1405
Bsp1407I TGTACA 1 cut(s) 1416
Bsp1720I GCTNAGC 1 cut(s) 1557
Bsp19I CCATGG 1 cut(s) 1495
BspANI GGCC 8 cut(s) 90, 194, 352, 819, 1134, 1346, 1508, 1550
BspCNI CTCAG 4 cut(s) 309, 369, 808, 1585
BspDI ATCGAT 2 cut(s) 75, 843
BspFNI CGCG 2 cut(s) 1571, 1600
BspMI ACCTGC 1 cut(s) 1471
BspPI GGATC 8 cut(s) 40, 114, 127, 190, 923, 1077, 1228, 1574
BspT107I GGYRCC 4 cut(s) 449, 578, 1009, 1092
BspTNI GGTCTC 1 cut(s) 881
BsrDI GCAATG 1 cut(s) 1058
BsrFI RCCGGY 3 cut(s) 575, 1012, 1095
BsrGI TGTACA 1 cut(s) 1416
BsrI ACTGG 5 cut(s) 43, 133, 601, 900, 1135
BssAI RCCGGY 3 cut(s) 575, 1012, 1095
BssNAI GTATAC 1 cut(s) 1128
BssNI GRCGYC 2 cut(s) 831, 1428
BssSI CACGAG 1 cut(s) 406
BssT1I CCWWGG 5 cut(s) 236, 423, 853, 1347, 1495
Bst1107I GTATAC 1 cut(s) 1128
Bst2BI CACGAG 1 cut(s) 406
Bst2UI CCWGG 4 cut(s) 16, 55, 821, 1068
Bst4CI ACNGT 2 cut(s) 208, 1260
Bst6I CTCTTC 6 cut(s) 626, 743, 879, 1154, 1412, 1599
BstACI GRCGYC 2 cut(s) 831, 1428
BstAPI GCANNNNNTGC 1 cut(s) 1303
BstAUI TGTACA 1 cut(s) 1416
BstC8I GCNNGC 5 cut(s) 60, 372, 1344, 1401, 1432
BstDEI CTNAG 7 cut(s) 85, 317, 347, 356, 795, 1557, 1593
BstDSI CCRYGG 1 cut(s) 1495
BstEII GGTNACC 1 cut(s) 1310
BstENI CCTNNNNNAGG 1 cut(s) 457
BstF5I GGATG 4 cut(s) 367, 690, 793, 1144
BstFNI CGCG 2 cut(s) 1571, 1600
BstH2I RGCGCY 1 cut(s) 403
BstHHI GCGC 2 cut(s) 402, 1600
BstMAI GTCTC 5 cut(s) 881, 1156, 1221, 1521, 1594
BstMCI CGRYCG 2 cut(s) 79, 1336
BstMWI GCNNNNNNNGC 5 cut(s) 59, 441, 727, 1252, 1303
BstNI CCWGG 4 cut(s) 16, 55, 821, 1068
BstNSI RCATGY 1 cut(s) 490
BstPAI GACNNNNGTC 2 cut(s) 950, 1189
BstPI GGTNACC 1 cut(s) 1310
BstSFI CTRYAG 1 cut(s) 1641
BstSLI GKGCMC 1 cut(s) 1405
BstUI CGCG 2 cut(s) 1571, 1600
BstV1I GCAGC 5 cut(s) 389, 428, 970, 1565, 1573
BstV2I GAAGAC 3 cut(s) 39, 783, 834
BstX2I RGATCY 3 cut(s) 119, 182, 1082
BstYI RGATCY 3 cut(s) 119, 182, 1082
BstZ17I GTATAC 1 cut(s) 1128
Bsu15I ATCGAT 2 cut(s) 75, 843
BsuI GTATCC 1 cut(s) 19
BsuRI GGCC 8 cut(s) 90, 194, 352, 819, 1134, 1346, 1508, 1550
BsuTUI ATCGAT 2 cut(s) 75, 843
BtgI CCRYGG 1 cut(s) 1495
BtgZI GCGATG 2 cut(s) 289, 1065
BtsCI GGATG 4 cut(s) 367, 690, 793, 1144
BtsI GCAGTG 1 cut(s) 154
BtsIMutI CAGTG 1 cut(s) 154
BveI ACCTGC 1 cut(s) 1471
Cac8I GCNNGC 5 cut(s) 60, 372, 1344, 1401, 1432
CaiI CAGNNNCTG 1 cut(s) 1649
CfoI GCGC 2 cut(s) 402, 1600
Cfr10I RCCGGY 3 cut(s) 575, 1012, 1095
Cfr13I GGNCC 8 cut(s) 193, 258, 598, 817, 876, 1015, 1184, 1344
Cfr9I CCCGGG 3 cut(s) 275, 642, 1383
ClaI ATCGAT 2 cut(s) 75, 843
CpoI CGGWCCG 1 cut(s) 876
CseI GACGC 3 cut(s) 839, 944, 1436
Csp6I GTAC 8 cut(s) 40, 82, 579, 867, 1010, 1270, 1356, 1417
CspAI ACCGGT 2 cut(s) 575, 1012
CspI CGGWCCG 1 cut(s) 876
CviAII CATG 5 cut(s) 310, 487, 1303, 1393, 1496
CviQI GTAC 8 cut(s) 40, 82, 579, 867, 1010, 1270, 1356, 1417
DdeI CTNAG 7 cut(s) 85, 317, 347, 356, 795, 1557, 1593
DriI GACNNNNNGTC 1 cut(s) 856
EaeI YGGCCR 2 cut(s) 1132, 1548
Eam1104I CTCTTC 6 cut(s) 626, 743, 879, 1154, 1412, 1599
Eam1105I GACNNNNNGTC 1 cut(s) 856
EarI CTCTTC 6 cut(s) 626, 743, 879, 1154, 1412, 1599
Ecl136II GAGCTC 1 cut(s) 678
Eco130I CCWWGG 5 cut(s) 236, 423, 853, 1347, 1495
Eco147I AGGCCT 1 cut(s) 352
Eco24I GRGCYC 1 cut(s) 680
Eco31I GGTCTC 1 cut(s) 881
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 5 cut(s) 258, 598, 876, 1015, 1184
Eco53kI GAGCTC 1 cut(s) 678
Eco57I CTGAAG 4 cut(s) 84, 639, 1337, 1472
Eco88I CYCGRG 7 cut(s) 218, 275, 387, 642, 1180, 1383, 1620
Eco91I GGTNACC 1 cut(s) 1310
EcoICRI GAGCTC 1 cut(s) 678
EcoNI CCTNNNNNAGG 1 cut(s) 457
EcoO109I RGGNCCY 1 cut(s) 193
EcoO65I GGTNACC 1 cut(s) 1310
EcoRII CCWGG 4 cut(s) 14, 53, 819, 1066
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 5 cut(s) 236, 423, 853, 1347, 1495
EcoT38I GRGCYC 1 cut(s) 680
ErhI CCWWGG 5 cut(s) 236, 423, 853, 1347, 1495
FaeI CATG 5 cut(s) 313, 490, 1306, 1396, 1499
FalI AAGNNNNNCTT 2 cut(s) 819, 851
FaqI GGGAC 6 cut(s) 271, 611, 1001, 1012, 1197, 1637
FatI CATG 5 cut(s) 309, 486, 1302, 1392, 1495
FauI CCCGC 3 cut(s) 1335, 1392, 1593
FauNDI CATATG 1 cut(s) 263
FblI GTMKAC 2 cut(s) 849, 1127
Fnu4HI GCNGC 6 cut(s) 403, 442, 959, 1551, 1554, 1562
FokI GGATG 4 cut(s) 374, 677, 800, 1151
FriOI GRGCYC 1 cut(s) 680
Fsp4HI GCNGC 6 cut(s) 403, 442, 959, 1551, 1554, 1562
FspBI CTAG 7 cut(s) 237, 459, 476, 530, 716, 722, 854
GlaI GCGC 2 cut(s) 401, 1599
GluI GCNGC 6 cut(s) 403, 442, 959, 1551, 1554, 1562
GsaI CCCAGC 1 cut(s) 1047
GsuI CTGGAG 2 cut(s) 917, 1535
HaeII RGCGCY 1 cut(s) 403
HaeIII GGCC 8 cut(s) 90, 194, 352, 819, 1134, 1346, 1508, 1550
HgaI GACGC 3 cut(s) 839, 944, 1436
HhaI GCGC 2 cut(s) 402, 1600
Hin1I GRCGYC 2 cut(s) 831, 1428
Hin1II CATG 5 cut(s) 313, 490, 1306, 1396, 1499
Hin6I GCGC 2 cut(s) 400, 1598
HinP1I GCGC 2 cut(s) 400, 1598
HincII GTYRAC 2 cut(s) 573, 850
HindII GTYRAC 2 cut(s) 573, 850
HphI GGTGA 9 cut(s) 179, 895, 1082, 1132, 1243, 1322, 1495, 1595, 1621
Hpy166II GTNNAC 5 cut(s) 573, 850, 1128, 1417, 1419
Hpy188I TCNGA 8 cut(s) 10, 142, 160, 619, 664, 1452, 1594, 1630
Hpy188III TCNNGA 5 cut(s) 218, 932, 982, 1182, 1622
Hpy8I GTNNAC 5 cut(s) 573, 850, 1128, 1417, 1419
Hpy99I CGWCG 3 cut(s) 40, 164, 1198
HpyCH4III ACNGT 2 cut(s) 208, 1260
HpyCH4IV ACGT 1 cut(s) 1124
HpyCH4V TGCA 5 cut(s) 107, 245, 405, 958, 1297
HpyF10VI GCNNNNNNNGC 5 cut(s) 59, 441, 727, 1252, 1303
HpyF3I CTNAG 7 cut(s) 85, 317, 347, 356, 795, 1557, 1593
HpySE526I ACGT 1 cut(s) 1124
Hsp92I GRCGYC 2 cut(s) 831, 1428
Hsp92II CATG 5 cut(s) 313, 490, 1306, 1396, 1499
HspAI GCGC 2 cut(s) 400, 1598
KpnI GGTACC 2 cut(s) 582, 1013
LmnI GCTCC 8 cut(s) 343, 675, 735, 943, 1043, 1047, 1522, 1573
Lsp1109I GCAGC 5 cut(s) 389, 428, 970, 1565, 1573
LweI GCATC 4 cut(s) 781, 1108, 1144, 1386
MaeI CTAG 7 cut(s) 237, 459, 476, 530, 716, 722, 854
MaeII ACGT 1 cut(s) 1124
MaeIII GTNAC 5 cut(s) 202, 478, 943, 1120, 1310
MflI RGATCY 3 cut(s) 119, 182, 1082
MhlI GDGCHC 2 cut(s) 680, 1405
MluCI AATT 3 cut(s) 101, 213, 549
MlyI GAGTC 6 cut(s) 164, 880, 1199, 1523, 1619, 1655
MmeI TCCRAC 1 cut(s) 183
MroXI GAANNNNTTC 1 cut(s) 415
MseI TTAA 1 cut(s) 552
MslI CAYNNNNRTG 3 cut(s) 308, 843, 1104
MspA1I CMGCKG 3 cut(s) 441, 1043, 1564
MvaI CCWGG 4 cut(s) 16, 55, 821, 1068
MvnI CGCG 2 cut(s) 1571, 1600
MwoI GCNNNNNNNGC 5 cut(s) 59, 441, 727, 1252, 1303
NcoI CCATGG 1 cut(s) 1495
NdeI CATATG 1 cut(s) 263
NlaIII CATG 5 cut(s) 313, 490, 1306, 1396, 1499
NmeAIII GCCGAG 1 cut(s) 116
NmuCI GTSAC 4 cut(s) 202, 943, 1120, 1310
NspI RCATGY 1 cut(s) 490
PaqCI CACCTGC 1 cut(s) 1471
PceI AGGCCT 1 cut(s) 352
PcsI WCGNNNNNNNCGW 3 cut(s) 35, 122, 866
PdmI GAANNNNTTC 1 cut(s) 415
PfeI GAWTC 5 cut(s) 5, 378, 411, 687, 1388
PinAI ACCGGT 2 cut(s) 575, 1012
PkrI GCNGC 6 cut(s) 404, 443, 960, 1552, 1555, 1563
Ple19I CGATCG 1 cut(s) 79
PleI GAGTC 6 cut(s) 163, 879, 1198, 1523, 1619, 1654
PpsI GAGTC 6 cut(s) 163, 879, 1198, 1523, 1619, 1654
PshAI GACNNNNGTC 2 cut(s) 950, 1189
Psp124BI GAGCTC 1 cut(s) 680
Psp6I CCWGG 4 cut(s) 14, 53, 819, 1066
PspEI GGTNACC 1 cut(s) 1310
PspFI CCCAGC 1 cut(s) 1043
PspGI CCWGG 4 cut(s) 14, 53, 819, 1066
PspPI GGNCC 8 cut(s) 193, 258, 598, 817, 876, 1015, 1184, 1344
PstNI CAGNNNCTG 1 cut(s) 1649
PsuI RGATCY 3 cut(s) 119, 182, 1082
PvuI CGATCG 1 cut(s) 79
RsaI GTAC 8 cut(s) 41, 83, 580, 868, 1011, 1271, 1357, 1418
RsaNI GTAC 8 cut(s) 40, 82, 579, 867, 1010, 1270, 1356, 1417
RseI CAYNNNNRTG 3 cut(s) 308, 843, 1104
Rsr2I CGGWCCG 1 cut(s) 876
RsrII CGGWCCG 1 cut(s) 876
SacI GAGCTC 1 cut(s) 680
SalI GTCGAC 1 cut(s) 848
SaqAI TTAA 1 cut(s) 552
SatI GCNGC 6 cut(s) 403, 442, 959, 1551, 1554, 1562
Sau96I GGNCC 8 cut(s) 193, 258, 598, 817, 876, 1015, 1184, 1344
SchI GAGTC 6 cut(s) 164, 880, 1199, 1523, 1619, 1655
SduI GDGCHC 2 cut(s) 680, 1405
SfaNI GCATC 4 cut(s) 781, 1108, 1144, 1386
SfcI CTRYAG 1 cut(s) 1641
SinI GGWCC 5 cut(s) 258, 598, 876, 1015, 1184
SmaI CCCGGG 3 cut(s) 277, 644, 1385
SmiMI CAYNNNNRTG 3 cut(s) 308, 843, 1104
SmlI CTYRAG 1 cut(s) 1577
SmoI CTYRAG 1 cut(s) 1577
SpeI ACTAGT 1 cut(s) 475
Sse9I AATT 3 cut(s) 101, 213, 549
SseBI AGGCCT 1 cut(s) 352
SspMI CTAG 7 cut(s) 237, 459, 476, 530, 716, 722, 854
SstI GAGCTC 1 cut(s) 680
StuI AGGCCT 1 cut(s) 352
StyI CCWWGG 5 cut(s) 236, 423, 853, 1347, 1495
TaaI ACNGT 2 cut(s) 208, 1260
TaiI ACGT 1 cut(s) 1127
TaqI TCGA 9 cut(s) 75, 125, 497, 624, 843, 849, 860, 1152, 1332
TaqII GACCGA 1 cut(s) 864
TasI AATT 3 cut(s) 101, 213, 549
TatI WGTACW 2 cut(s) 1269, 1416
TauI GCSGC 1 cut(s) 1553
TfiI GAWTC 5 cut(s) 5, 378, 411, 687, 1388
Tru1I TTAA 1 cut(s) 552
Tru9I TTAA 1 cut(s) 552
TscAI CASTG 1 cut(s) 154
TseFI GTSAC 4 cut(s) 202, 943, 1120, 1310
TseI GCWGC 5 cut(s) 402, 441, 958, 1553, 1561
Tsp45I GTSAC 4 cut(s) 202, 943, 1120, 1310
TspDTI ATGAA 3 cut(s) 308, 679, 1299
TspGWI ACGGA 1 cut(s) 868
TspMI CCCGGG 3 cut(s) 275, 642, 1383
TspRI CASTG 1 cut(s) 154
VpaK11BI GGWCC 5 cut(s) 258, 598, 876, 1015, 1184
XagI CCTNNNNNAGG 1 cut(s) 457
XceI RCATGY 1 cut(s) 490
XmaI CCCGGG 3 cut(s) 275, 642, 1383
XmaJI CCTAGG 2 cut(s) 236, 853
XmiI GTMKAC 2 cut(s) 849, 1127
XmnI GAANNNNTTC 1 cut(s) 415
XspI CTAG 7 cut(s) 237, 459, 476, 530, 716, 722, 854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.