Rmu_sc0002029.1_g000007

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002029.1
OG0000087
Physical Location & Seq
Reverse (-)
19602 .. 21814
2213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002029.1_g000007.1.cds

Sequence Viewer

Length: 1728 bp
atggaatcagaagccagaggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggatatcgatcgtgaggagtccgacgatggtgagagcgagggtggatctgcggaggccccggtagtcacggtggcaattcccgagggcataccgaagccgaggtatacacttgcggatgggaccgtatgcgacgaacccgggagaagtatgacgatgaaggagataatcgacatgcgactgaagtggggaataccggatgcggtggagcttaggcctctctgggatggagagatggccgcgaatccctccccggggtgggtggcgctgcacgagaatcagctctcccaagggttatcgctactgctgccccggtgcctacagtatctgctgcggatgctgaacctgtcaccggggcagctgaccccgaatgccactcgtcaaatatacagtatgatggccatgtgggacttgtgtcaacaagggtggccctccataaatgaattcagcgcggtacaccgggtactgtactcaaggaagcagtcttgtgcgggtacggttacatttgccgctagggattacgaaccactagttaccgacatgccttcctcgataagcaaaagtgaaagcaccgaacagttgatggatatgctgatgggccagggggaagacgccatacacatcgatgtcgacctagggtcgaaaagtacaagtcgatcggttgaagaaacccttctggagatcaccgatgagggatatggtgaacctgatcccgacgctcccgtgacccacgtcatgcagccttccttggccgacgttattacgatagatgaccccgggatgggaaaggtacatgccccggtgcctatttcctctcgttccactgggagcgatgaggcattgcttcctggtgagaagaaaagatcccataggcaccggcatcgaagtgataagcaggaggtgacgtatactggctgggatgttcagggtttcggtgcgaagaggcagaagaaagatcacccgggaccaaagtcgtcgccttcgcttggcttgttgtctcctgccattccggtaatccccaagaagcccatcaagcagctgttgagtgagtacggggttgccgatgaaaagttcgtgcggtccatgcttggtgacctgaaggatattgacctcgaccgggttcgagccaaggacaatacgccccaagagaatcgcccactcttcaatgtgtacgccattgacgccggcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggcaaagcaggagaaggagcgggactcattgaaggctgagatggccgtcgctaagcagcggatcgcggagcttgagggtgaagtctctgaggcgcgggaagaggtgaagaacgctcgggaattcgagaaaaaagctgcagagtctgccgtgtcatggaaggagaaggcagaccacctggaggatcgccttcccgcggagaggcgcgaggccgtggaggagtacaagtcctccgaagagctcatcaccatgctaactgctgcccaagataaggctgtcatcatgaagttcaaggagtgggtggcggctggatacttggatgaagctaaattcaggcggggtctcttggaaaaaaagaagaaggatcgggaggcggcggtcaagtctggtgccggtgggtcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

575

Amino Acids

63.63

Weight (kDa)

5.13

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1291
Acc36I ACCTGC 1 cut(s) 1291
AccB1I GGYRCC 4 cut(s) 381, 868, 939, 1712
AccBSI CCGCTC 1 cut(s) 1345
AccI GTMKAC 3 cut(s) 173, 696, 974
AccII CGCG 6 cut(s) 308, 518, 1391, 1420, 1520, 1530
AclWI GGATC 7 cut(s) 40, 121, 770, 924, 1394, 1515, 1695
AcoI YGGCCR 4 cut(s) 303, 465, 816, 1368
AcsI RAATTY 3 cut(s) 509, 1445, 1652
AcuI CTGAAG 4 cut(s) 84, 269, 1184, 1292
AcyI GRCGYC 2 cut(s) 678, 1248
AgsI TTSAA 4 cut(s) 731, 1231, 1357, 1615
AhdI GACNNNNNGTC 1 cut(s) 703
AhlI ACTAGT 1 cut(s) 595
AjiI CACGTC 1 cut(s) 799
AjnI CCWGG 4 cut(s) 53, 666, 913, 1500
AluBI AGCT 9 cut(s) 62, 277, 349, 427, 1105, 1396, 1460, 1564, 1649
AluI AGCT 9 cut(s) 62, 277, 349, 427, 1105, 1396, 1460, 1564, 1649
Alw21I GWGCWC 1 cut(s) 1566
Alw26I GTCTC 3 cut(s) 1068, 1414, 1670
AlwI GGATC 7 cut(s) 40, 121, 770, 924, 1394, 1515, 1695
AlwNI CAGNNNCTG 2 cut(s) 394, 1469
Ama87I CYCGRG 6 cut(s) 149, 206, 319, 842, 1027, 1440
AoxI GGCC 9 cut(s) 123, 281, 303, 465, 494, 664, 816, 1368, 1533
ApeKI GCWGC 9 cut(s) 334, 373, 397, 424, 805, 1102, 1381, 1460, 1583
ApoI RAATTY 3 cut(s) 509, 1445, 1652
Asp700I GAANNNNTTC 1 cut(s) 738
AspA2I CCTAGG 1 cut(s) 700
AspLEI GCGC 4 cut(s) 334, 518, 1420, 1530
AspS9I GGNCC 7 cut(s) 124, 189, 495, 664, 1031, 1146, 1722
AvaI CYCGRG 6 cut(s) 149, 206, 319, 842, 1027, 1440
AvaII GGWCC 4 cut(s) 189, 1031, 1146, 1722
AvrII CCTAGG 1 cut(s) 700
BalI TGGCCA 1 cut(s) 467
BanI GGYRCC 4 cut(s) 381, 868, 939, 1712
BanII GRGCYC 1 cut(s) 1566
BarI GAAGNNNNNNTAC 2 cut(s) 666, 698
BauI CACGAG 1 cut(s) 338
BbsI GAAGAC 2 cut(s) 39, 681
Bbv12I GWGCWC 1 cut(s) 1566
BbvI GCAGC 9 cut(s) 321, 360, 384, 436, 817, 1114, 1393, 1447, 1570
BceAI ACGGC 3 cut(s) 1355, 1457, 1520
BcgI CGANNNNNNTGC 2 cut(s) 929, 963
BciT130I CCWGG 4 cut(s) 55, 668, 915, 1502
BciVI GTATCC 2 cut(s) 19, 1628
BcoDI GTCTC 3 cut(s) 1068, 1414, 1670
BcuI ACTAGT 1 cut(s) 595
BfaI CTAG 4 cut(s) 579, 596, 701, 1726
BfmI CTRYAG 2 cut(s) 386, 1461
BfoI RGCGCY 1 cut(s) 335
BfuAI ACCTGC 1 cut(s) 1291
BfuI GTATCC 2 cut(s) 19, 1628
BlnI CCTAGG 1 cut(s) 700
BlpI GCTNAGC 1 cut(s) 1377
Bme18I GGWCC 4 cut(s) 189, 1031, 1146, 1722
BmeRI GACNNNNNGTC 1 cut(s) 703
BmeT110I CYCGRG 6 cut(s) 149, 206, 319, 842, 1027, 1440
BmgBI CACGTC 1 cut(s) 799
BmgT120I GGNCC 7 cut(s) 124, 189, 495, 664, 1031, 1146, 1722
BmiI GGNNCC 8 cut(s) 126, 190, 383, 870, 941, 1032, 1714, 1723
BmrI ACTGGG 1 cut(s) 900
BmsI GCATC 3 cut(s) 256, 393, 955
BmuI ACTGGG 1 cut(s) 900
BoxI GACNNNNGTC 3 cut(s) 480, 797, 1036
BpiI GAAGAC 2 cut(s) 39, 681
BplI GAGNNNNNCTC 2 cut(s) 1334, 1366
BpmI CTGGAG 2 cut(s) 764, 1523
Bpu10I CCTNAGC 1 cut(s) 278
Bpu1102I GCTNAGC 1 cut(s) 1377
BpuEI CTTGAG 2 cut(s) 523, 1418
Bsa29I ATCGAT 2 cut(s) 75, 690
BsaBI GATNNNNATC 2 cut(s) 75, 1266
BsaHI GRCGYC 2 cut(s) 678, 1248
BsaI GGTCTC 1 cut(s) 1670
BsaWI WCCGGW 2 cut(s) 262, 1075
BsaXI ACNNNNNCTCC 6 cut(s) 956, 986, 1535, 1538, 1565, 1568
Bse118I RCCGGY 3 cut(s) 942, 1250, 1715
Bse1I ACTGG 3 cut(s) 43, 895, 982
Bse3DI GCAATG 1 cut(s) 905
Bse8I GATNNNNATC 2 cut(s) 75, 1266
BseBI CCWGG 4 cut(s) 55, 668, 915, 1502
BseCI ATCGAT 2 cut(s) 75, 690
BseGI GGATG 7 cut(s) 190, 271, 298, 408, 852, 991, 1648
BseJI GATNNNNATC 2 cut(s) 75, 1266
BseMI GCAATG 1 cut(s) 905
BseMII CTCAG 2 cut(s) 1353, 1404
BseNI ACTGG 3 cut(s) 43, 895, 982
BseRI GAGGAG 3 cut(s) 98, 1292, 1556
BseXI GCAGC 9 cut(s) 321, 360, 384, 436, 817, 1114, 1393, 1447, 1570
BseYI CCCAGC 1 cut(s) 981
BsgI GTGCAG 1 cut(s) 320
Bsh1236I CGCG 6 cut(s) 308, 518, 1391, 1420, 1520, 1530
Bsh1285I CGRYCG 3 cut(s) 79, 725, 1183
BshFI GGCC 9 cut(s) 125, 283, 305, 467, 496, 666, 818, 1370, 1535
BshNI GGYRCC 4 cut(s) 381, 868, 939, 1712
BshVI ATCGAT 2 cut(s) 75, 690
BsiEI CGRYCG 3 cut(s) 79, 725, 1183
BsiHKAI GWGCWC 1 cut(s) 1566
BsiHKCI CYCGRG 6 cut(s) 149, 206, 319, 842, 1027, 1440
BslFI GGGAC 4 cut(s) 202, 488, 1044, 1361
BsmAI GTCTC 3 cut(s) 1068, 1414, 1670
BsmFI GGGAC 4 cut(s) 202, 488, 1044, 1361
BsmI GAATGC 1 cut(s) 442
BsnI GGCC 9 cut(s) 125, 283, 305, 467, 496, 666, 818, 1370, 1535
Bso31I GGTCTC 1 cut(s) 1670
BsoBI CYCGRG 6 cut(s) 149, 206, 319, 842, 1027, 1440
Bsp1286I GDGCHC 1 cut(s) 1566
Bsp1720I GCTNAGC 1 cut(s) 1377
BspANI GGCC 9 cut(s) 125, 283, 305, 467, 496, 666, 818, 1370, 1535
BspCNI CTCAG 2 cut(s) 1354, 1405
BspDI ATCGAT 2 cut(s) 75, 690
BspFNI CGCG 6 cut(s) 308, 518, 1391, 1420, 1520, 1530
BspHI TCATGA 1 cut(s) 1605
BspLI GGNNCC 8 cut(s) 126, 190, 383, 870, 941, 1032, 1714, 1723
BspMAI CTGCAG 1 cut(s) 1465
BspMI ACCTGC 1 cut(s) 1291
BspPI GGATC 7 cut(s) 40, 121, 770, 924, 1394, 1515, 1695
BspQI GCTCTTC 1 cut(s) 1554
BspT107I GGYRCC 4 cut(s) 381, 868, 939, 1712
BspTNI GGTCTC 1 cut(s) 1670
BsrBI CCGCTC 1 cut(s) 1345
BsrDI GCAATG 1 cut(s) 905
BsrFI RCCGGY 3 cut(s) 942, 1250, 1715
BsrI ACTGG 3 cut(s) 43, 895, 982
BssAI RCCGGY 3 cut(s) 942, 1250, 1715
BssNAI GTATAC 2 cut(s) 174, 975
BssNI GRCGYC 2 cut(s) 678, 1248
BssSI CACGAG 1 cut(s) 338
BssT1I CCWWGG 4 cut(s) 355, 700, 813, 1194
Bst1107I GTATAC 2 cut(s) 174, 975
Bst2BI CACGAG 1 cut(s) 338
Bst2UI CCWGG 4 cut(s) 55, 668, 915, 1502
Bst4CI ACNGT 7 cut(s) 139, 193, 390, 458, 534, 565, 645
Bst6I CTCTTC 4 cut(s) 1001, 1232, 1419, 1554
BstACI GRCGYC 2 cut(s) 678, 1248
BstAPI GCANNNNNTGC 1 cut(s) 1469
BstC8I GCNNGC 2 cut(s) 60, 1252
BstDEI CTNAG 4 cut(s) 278, 1362, 1377, 1413
BstDSI CCRYGG 2 cut(s) 1518, 1536
BstEII GGTNACC 1 cut(s) 1157
BstF5I GGATG 7 cut(s) 190, 271, 298, 408, 852, 991, 1648
BstFNI CGCG 6 cut(s) 308, 518, 1391, 1420, 1520, 1530
BstH2I RGCGCY 1 cut(s) 335
BstHHI GCGC 4 cut(s) 334, 518, 1420, 1530
BstMAI GTCTC 3 cut(s) 1068, 1414, 1670
BstMCI CGRYCG 3 cut(s) 79, 725, 1183
BstMWI GCNNNNNNNGC 8 cut(s) 59, 373, 403, 1099, 1150, 1247, 1367, 1469
BstNI CCWGG 4 cut(s) 55, 668, 915, 1502
BstNSI RCATGY 3 cut(s) 244, 610, 863
BstPAI GACNNNNGTC 3 cut(s) 480, 797, 1036
BstPI GGTNACC 1 cut(s) 1157
BstSFI CTRYAG 2 cut(s) 386, 1461
BstUI CGCG 6 cut(s) 308, 518, 1391, 1420, 1520, 1530
BstV1I GCAGC 9 cut(s) 321, 360, 384, 436, 817, 1114, 1393, 1447, 1570
BstV2I GAAGAC 2 cut(s) 39, 681
BstX2I RGATCY 2 cut(s) 113, 929
BstYI RGATCY 2 cut(s) 113, 929
BstZ17I GTATAC 2 cut(s) 174, 975
Bsu15I ATCGAT 2 cut(s) 75, 690
BsuI GTATCC 2 cut(s) 19, 1628
BsuRI GGCC 9 cut(s) 125, 283, 305, 467, 496, 666, 818, 1370, 1535
BsuTUI ATCGAT 2 cut(s) 75, 690
BtgI CCRYGG 2 cut(s) 1518, 1536
BtgZI GCGATG 1 cut(s) 912
BtrI CACGTC 1 cut(s) 799
BtsCI GGATG 7 cut(s) 190, 271, 298, 408, 852, 991, 1648
BtsIMutI CAGTG 1 cut(s) 888
BveI ACCTGC 1 cut(s) 1291
Cac8I GCNNGC 2 cut(s) 60, 1252
CaiI CAGNNNCTG 2 cut(s) 394, 1469
CciI TCATGA 1 cut(s) 1605
CfoI GCGC 4 cut(s) 334, 518, 1420, 1530
Cfr10I RCCGGY 3 cut(s) 942, 1250, 1715
Cfr13I GGNCC 7 cut(s) 124, 189, 495, 664, 1031, 1146, 1722
Cfr42I CCGCGG 1 cut(s) 1521
Cfr9I CCCGGG 4 cut(s) 206, 319, 842, 1027
ClaI ATCGAT 2 cut(s) 75, 690
CseI GACGC 3 cut(s) 686, 791, 1256
CspCI CAANNNNNGTGG 2 cut(s) 473, 508
DdeI CTNAG 4 cut(s) 278, 1362, 1377, 1413
DriI GACNNNNNGTC 1 cut(s) 703
EaeI YGGCCR 4 cut(s) 303, 465, 816, 1368
Eam1104I CTCTTC 4 cut(s) 1001, 1232, 1419, 1554
Eam1105I GACNNNNNGTC 1 cut(s) 703
EarI CTCTTC 4 cut(s) 1001, 1232, 1419, 1554
Ecl136II GAGCTC 1 cut(s) 1564
Eco130I CCWWGG 4 cut(s) 355, 700, 813, 1194
Eco147I AGGCCT 1 cut(s) 283
Eco24I GRGCYC 1 cut(s) 1566
Eco31I GGTCTC 1 cut(s) 1670
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 4 cut(s) 189, 1031, 1146, 1722
Eco53kI GAGCTC 1 cut(s) 1564
Eco57I CTGAAG 4 cut(s) 84, 269, 1184, 1292
Eco88I CYCGRG 6 cut(s) 149, 206, 319, 842, 1027, 1440
Eco91I GGTNACC 1 cut(s) 1157
EcoICRI GAGCTC 1 cut(s) 1564
EcoO109I RGGNCCY 2 cut(s) 124, 1722
EcoO65I GGTNACC 1 cut(s) 1157
EcoRI GAATTC 2 cut(s) 509, 1445
EcoRII CCWGG 4 cut(s) 53, 666, 913, 1500
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 4 cut(s) 355, 700, 813, 1194
EcoT38I GRGCYC 1 cut(s) 1566
ErhI CCWWGG 4 cut(s) 355, 700, 813, 1194
FalI AAGNNNNNCTT 2 cut(s) 723, 755
FaqI GGGAC 4 cut(s) 202, 488, 1044, 1361
FauI CCCGC 5 cut(s) 550, 1338, 1413, 1525, 1653
FblI GTMKAC 3 cut(s) 173, 696, 974
FokI GGATG 7 cut(s) 197, 278, 305, 415, 859, 998, 1655
FriOI GRGCYC 1 cut(s) 1566
FspBI CTAG 4 cut(s) 579, 596, 701, 1726
GlaI GCGC 4 cut(s) 333, 517, 1419, 1529
GsaI CCCAGC 1 cut(s) 985
GsuI CTGGAG 2 cut(s) 764, 1523
HaeII RGCGCY 1 cut(s) 335
HaeIII GGCC 9 cut(s) 125, 283, 305, 467, 496, 666, 818, 1370, 1535
HgaI GACGC 3 cut(s) 686, 791, 1256
HhaI GCGC 4 cut(s) 334, 518, 1420, 1530
Hin1I GRCGYC 2 cut(s) 678, 1248
Hin6I GCGC 4 cut(s) 332, 516, 1418, 1528
HinP1I GCGC 4 cut(s) 332, 516, 1418, 1528
HincII GTYRAC 2 cut(s) 485, 697
HindII GTYRAC 2 cut(s) 485, 697
HinfI GANTC 7 cut(s) 5, 86, 310, 343, 1216, 1349, 1466
Hpy166II GTNNAC 7 cut(s) 174, 485, 523, 697, 770, 975, 1237
Hpy188I TCNGA 5 cut(s) 10, 91, 1272, 1414, 1558
Hpy188III TCNNGA 8 cut(s) 80, 149, 743, 779, 1442, 1450, 1606, 1691
Hpy8I GTNNAC 7 cut(s) 174, 485, 523, 697, 770, 975, 1237
Hpy99I CGWCG 7 cut(s) 40, 95, 203, 785, 824, 1045, 1376
HpyCH4III ACNGT 7 cut(s) 139, 193, 390, 458, 534, 565, 645
HpyCH4IV ACGT 3 cut(s) 798, 822, 971
HpyCH4V TGCA 3 cut(s) 337, 805, 1463
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 373, 403, 1099, 1150, 1247, 1367, 1469
HpyF3I CTNAG 4 cut(s) 278, 1362, 1377, 1413
HpySE526I ACGT 3 cut(s) 798, 822, 971
Hsp92I GRCGYC 2 cut(s) 678, 1248
HspAI GCGC 4 cut(s) 332, 516, 1418, 1528
KroI GCCGGC 1 cut(s) 1250
KroNI GCCGGC 1 cut(s) 1252
KspI CCGCGG 1 cut(s) 1521
LguI GCTCTTC 1 cut(s) 1554
LmnI GCTCC 5 cut(s) 274, 790, 894, 1342, 1393
Lsp1109I GCAGC 9 cut(s) 321, 360, 384, 436, 817, 1114, 1393, 1447, 1570
LweI GCATC 3 cut(s) 256, 393, 955
MaeI CTAG 4 cut(s) 579, 596, 701, 1726
MaeII ACGT 3 cut(s) 798, 822, 971
MaeIII GTNAC 7 cut(s) 133, 414, 565, 598, 790, 967, 1157
MbiI CCGCTC 1 cut(s) 1345
MflI RGATCY 2 cut(s) 113, 929
MhlI GDGCHC 1 cut(s) 1566
MlsI TGGCCA 1 cut(s) 467
MluCI AATT 4 cut(s) 144, 509, 1445, 1652
MluNI TGGCCA 1 cut(s) 467
MlyI GAGTC 3 cut(s) 95, 1343, 1475
MmeI TCCRAC 1 cut(s) 114
Mox20I TGGCCA 1 cut(s) 467
MreI CGCCGGCG 1 cut(s) 1250
MroNI GCCGGC 1 cut(s) 1250
MroXI GAANNNNTTC 1 cut(s) 738
MscI TGGCCA 1 cut(s) 467
MslI CAYNNNNRTG 3 cut(s) 690, 951, 1571
Msp20I TGGCCA 1 cut(s) 467
MspA1I CMGCKG 4 cut(s) 427, 1105, 1384, 1520
Mva1269I GAATGC 1 cut(s) 442
MvaI CCWGG 4 cut(s) 55, 668, 915, 1502
MvnI CGCG 6 cut(s) 308, 518, 1391, 1420, 1520, 1530
MwoI GCNNNNNNNGC 8 cut(s) 59, 373, 403, 1099, 1150, 1247, 1367, 1469
NaeI GCCGGC 1 cut(s) 1252
NgoMIV GCCGGC 1 cut(s) 1250
NlaIV GGNNCC 8 cut(s) 126, 190, 383, 870, 941, 1032, 1714, 1723
NmeAIII GCCGAG 1 cut(s) 192
NmuCI GTSAC 5 cut(s) 133, 414, 790, 967, 1157
NspI RCATGY 3 cut(s) 244, 610, 863
PagI TCATGA 1 cut(s) 1605
PaqCI CACCTGC 1 cut(s) 1291
PceI AGGCCT 1 cut(s) 283
PciSI GCTCTTC 1 cut(s) 1554
PcsI WCGNNNNNNNCGW 2 cut(s) 35, 1125
PctI GAATGC 1 cut(s) 442
PdiI GCCGGC 1 cut(s) 1252
PdmI GAANNNNTTC 1 cut(s) 738
PfeI GAWTC 4 cut(s) 5, 310, 343, 1216
Ple19I CGATCG 2 cut(s) 79, 725
PleI GAGTC 3 cut(s) 94, 1343, 1474
PpsI GAGTC 3 cut(s) 94, 1343, 1474
PpuMI RGGWCCY 1 cut(s) 1722
PshAI GACNNNNGTC 3 cut(s) 480, 797, 1036
Psp124BI GAGCTC 1 cut(s) 1566
Psp5II RGGWCCY 1 cut(s) 1722
Psp6I CCWGG 4 cut(s) 53, 666, 913, 1500
PspEI GGTNACC 1 cut(s) 1157
PspFI CCCAGC 1 cut(s) 981
PspGI CCWGG 4 cut(s) 53, 666, 913, 1500
PspN4I GGNNCC 8 cut(s) 126, 190, 383, 870, 941, 1032, 1714, 1723
PspPI GGNCC 7 cut(s) 124, 189, 495, 664, 1031, 1146, 1722
PspPPI RGGWCCY 1 cut(s) 1722
PstI CTGCAG 1 cut(s) 1465
PstNI CAGNNNCTG 2 cut(s) 394, 1469
PsuI RGATCY 2 cut(s) 113, 929
PvuI CGATCG 2 cut(s) 79, 725
PvuII CAGCTG 2 cut(s) 427, 1105
RseI CAYNNNNRTG 3 cut(s) 690, 951, 1571
SacI GAGCTC 1 cut(s) 1566
SacII CCGCGG 1 cut(s) 1521
SalI GTCGAC 1 cut(s) 695
SapI GCTCTTC 1 cut(s) 1554
Sau96I GGNCC 7 cut(s) 124, 189, 495, 664, 1031, 1146, 1722
SchI GAGTC 3 cut(s) 95, 1343, 1475
SduI GDGCHC 1 cut(s) 1566
SfaNI GCATC 3 cut(s) 256, 393, 955
SfcI CTRYAG 2 cut(s) 386, 1461
Sfr303I CCGCGG 1 cut(s) 1521
SgrAI CRCCGGYG 1 cut(s) 1250
SgrBI CCGCGG 1 cut(s) 1521
SinI GGWCC 4 cut(s) 189, 1031, 1146, 1722
SmaI CCCGGG 4 cut(s) 208, 321, 844, 1029
SmiMI CAYNNNNRTG 3 cut(s) 690, 951, 1571
SmlI CTYRAG 2 cut(s) 538, 1397
SmoI CTYRAG 2 cut(s) 538, 1397
SpeI ACTAGT 1 cut(s) 595
Sse9I AATT 4 cut(s) 144, 509, 1445, 1652
SseBI AGGCCT 1 cut(s) 283
SspMI CTAG 4 cut(s) 579, 596, 701, 1726
SstI GAGCTC 1 cut(s) 1566
StuI AGGCCT 1 cut(s) 283
StyI CCWWGG 4 cut(s) 355, 700, 813, 1194
TaaI ACNGT 7 cut(s) 139, 193, 390, 458, 534, 565, 645
TaiI ACGT 3 cut(s) 801, 825, 974
TasI AATT 4 cut(s) 144, 509, 1445, 1652
TatI WGTACW 3 cut(s) 534, 713, 1545
TauI GCSGC 4 cut(s) 308, 578, 1631, 1700
TfiI GAWTC 4 cut(s) 5, 310, 343, 1216
TscAI CASTG 1 cut(s) 895
TseFI GTSAC 5 cut(s) 133, 414, 790, 967, 1157
TseI GCWGC 9 cut(s) 334, 373, 397, 424, 805, 1102, 1381, 1460, 1583
Tsp45I GTSAC 5 cut(s) 133, 414, 790, 967, 1157
TspDTI ATGAA 6 cut(s) 239, 522, 1146, 1304, 1622, 1659
TspMI CCCGGG 4 cut(s) 206, 319, 842, 1027
TspRI CASTG 1 cut(s) 895
VpaK11BI GGWCC 4 cut(s) 189, 1031, 1146, 1722
XapI RAATTY 3 cut(s) 509, 1445, 1652
XceI RCATGY 3 cut(s) 244, 610, 863
XmaI CCCGGG 4 cut(s) 206, 319, 842, 1027
XmaJI CCTAGG 1 cut(s) 700
XmiI GTMKAC 3 cut(s) 173, 696, 974
XmnI GAANNNNTTC 1 cut(s) 738
XspI CTAG 4 cut(s) 579, 596, 701, 1726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.