No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 447 |
| AccB1I | GGYRCC | 3 cut(s) | 181, 223, 447 |
| AccII | CGCG | 6 cut(s) | 35, 72, 176, 361, 405, 407 |
| AclWI | GGATC | 5 cut(s) | 21, 103, 116, 165, 178 |
| AcoI | YGGCCR | 1 cut(s) | 354 |
| AcyI | GRCGYC | 2 cut(s) | 182, 224 |
| AfaI | GTAC | 3 cut(s) | 410, 423, 449 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 118, 217, 309 |
| AluBI | AGCT | 1 cut(s) | 241 |
| AluI | AGCT | 1 cut(s) | 241 |
| Alw26I | GTCTC | 1 cut(s) | 137 |
| AlwI | GGATC | 5 cut(s) | 21, 103, 116, 165, 178 |
| Ama87I | CYCGRG | 1 cut(s) | 9 |
| AoxI | GGCC | 3 cut(s) | 25, 354, 383 |
| ApeKI | GCWGC | 2 cut(s) | 199, 265 |
| Asp718I | GGTACC | 1 cut(s) | 447 |
| AspLEI | GCGC | 4 cut(s) | 72, 184, 226, 407 |
| AsuC2I | CCSGG | 3 cut(s) | 10, 11, 213 |
| AsuHPI | GGTGA | 1 cut(s) | 167 |
| AvaI | CYCGRG | 1 cut(s) | 9 |
| BalI | TGGCCA | 1 cut(s) | 356 |
| BamHI | GGATCC | 2 cut(s) | 108, 170 |
| BanI | GGYRCC | 3 cut(s) | 181, 223, 447 |
| BanII | GRGCYC | 1 cut(s) | 481 |
| BbvI | GCAGC | 2 cut(s) | 186, 252 |
| BccI | CCATC | 4 cut(s) | 161, 189, 210, 346 |
| BceAI | ACGGC | 1 cut(s) | 450 |
| BcnI | CCSGG | 3 cut(s) | 10, 11, 213 |
| BcoDI | GTCTC | 1 cut(s) | 137 |
| BfoI | RGCGCY | 2 cut(s) | 185, 227 |
| BisI | GCNGC | 5 cut(s) | 185, 200, 227, 266, 463 |
| BlsI | GCNGC | 5 cut(s) | 186, 201, 228, 267, 464 |
| Bme1390I | CCNGG | 3 cut(s) | 10, 11, 213 |
| BmeT110I | CYCGRG | 1 cut(s) | 9 |
| BmiI | GGNNCC | 5 cut(s) | 110, 172, 183, 225, 449 |
| BmrFI | CCNGG | 3 cut(s) | 10, 11, 213 |
| BmsI | GCATC | 1 cut(s) | 284 |
| BpuEI | CTTGAG | 1 cut(s) | 410 |
| BpuMI | CCSGG | 3 cut(s) | 10, 11, 213 |
| BsaAI | YACGTR | 1 cut(s) | 281 |
| BsaHI | GRCGYC | 2 cut(s) | 182, 224 |
| BsaI | GGTCTC | 1 cut(s) | 137 |
| BsaJI | CCNNGG | 6 cut(s) | 8, 9, 174, 211, 247, 466 |
| BsaWI | WCCGGW | 2 cut(s) | 82, 105 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 118, 217, 309 |
| Bse118I | RCCGGY | 1 cut(s) | 372 |
| BseDI | CCNNGG | 6 cut(s) | 8, 9, 174, 211, 247, 466 |
| BseGI | GGATG | 3 cut(s) | 172, 221, 299 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 118, 217, 309 |
| BseXI | GCAGC | 2 cut(s) | 186, 252 |
| Bsh1236I | CGCG | 6 cut(s) | 35, 72, 176, 361, 405, 407 |
| Bsh1285I | CGRYCG | 1 cut(s) | 61 |
| BshFI | GGCC | 3 cut(s) | 27, 356, 385 |
| BshNI | GGYRCC | 3 cut(s) | 181, 223, 447 |
| BsiEI | CGRYCG | 1 cut(s) | 61 |
| BsiHKCI | CYCGRG | 1 cut(s) | 9 |
| BsiSI | CCGG | 6 cut(s) | 10, 83, 106, 188, 213, 373 |
| BslFI | GGGAC | 1 cut(s) | 377 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 118, 217, 309 |
| BsmAI | GTCTC | 1 cut(s) | 137 |
| BsmFI | GGGAC | 1 cut(s) | 377 |
| BsmI | GAATGC | 1 cut(s) | 331 |
| BsnI | GGCC | 3 cut(s) | 27, 356, 385 |
| Bso31I | GGTCTC | 1 cut(s) | 137 |
| BsoBI | CYCGRG | 1 cut(s) | 9 |
| Bsp1286I | GDGCHC | 1 cut(s) | 481 |
| Bsp143I | GATC | 3 cut(s) | 13, 108, 170 |
| Bsp68I | TCGCGA | 1 cut(s) | 35 |
| BspANI | GGCC | 3 cut(s) | 27, 356, 385 |
| BspFNI | CGCG | 6 cut(s) | 35, 72, 176, 361, 405, 407 |
| BspLI | GGNNCC | 5 cut(s) | 110, 172, 183, 225, 449 |
| BspPI | GGATC | 5 cut(s) | 21, 103, 116, 165, 178 |
| BspT107I | GGYRCC | 3 cut(s) | 181, 223, 447 |
| BspTNI | GGTCTC | 1 cut(s) | 137 |
| BsrFI | RCCGGY | 1 cut(s) | 372 |
| BssAI | RCCGGY | 1 cut(s) | 372 |
| BssECI | CCNNGG | 6 cut(s) | 8, 9, 174, 211, 247, 466 |
| BssMI | GATC | 3 cut(s) | 13, 108, 170 |
| BssNI | GRCGYC | 2 cut(s) | 182, 224 |
| BssT1I | CCWWGG | 1 cut(s) | 247 |
| Bst4CI | ACNGT | 2 cut(s) | 62, 452 |
| BstACI | GRCGYC | 2 cut(s) | 182, 224 |
| BstBAI | YACGTR | 1 cut(s) | 281 |
| BstC8I | GCNNGC | 2 cut(s) | 42, 374 |
| BstDEI | CTNAG | 1 cut(s) | 482 |
| BstDSI | CCRYGG | 2 cut(s) | 174, 466 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 307 |
| BstF5I | GGATG | 3 cut(s) | 172, 221, 299 |
| BstFNI | CGCG | 6 cut(s) | 35, 72, 176, 361, 405, 407 |
| BstH2I | RGCGCY | 2 cut(s) | 185, 227 |
| BstHHI | GCGC | 4 cut(s) | 72, 184, 226, 407 |
| BstKTI | GATC | 3 cut(s) | 16, 111, 173 |
| BstMAI | GTCTC | 1 cut(s) | 137 |
| BstMBI | GATC | 3 cut(s) | 13, 108, 170 |
| BstMCI | CGRYCG | 1 cut(s) | 61 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 41, 265, 382 |
| BstSCI | CCNGG | 3 cut(s) | 8, 9, 211 |
| BstSNI | TACGTA | 1 cut(s) | 281 |
| BstUI | CGCG | 6 cut(s) | 35, 72, 176, 361, 405, 407 |
| BstV1I | GCAGC | 2 cut(s) | 186, 252 |
| BstX2I | RGATCY | 2 cut(s) | 108, 170 |
| BstYI | RGATCY | 2 cut(s) | 108, 170 |
| BsuRI | GGCC | 3 cut(s) | 27, 356, 385 |
| BtgI | CCRYGG | 2 cut(s) | 174, 466 |
| BtsCI | GGATG | 3 cut(s) | 172, 221, 299 |
| BtuMI | TCGCGA | 1 cut(s) | 35 |
| Cac8I | GCNNGC | 2 cut(s) | 42, 374 |
| CfoI | GCGC | 4 cut(s) | 72, 184, 226, 407 |
| Cfr10I | RCCGGY | 1 cut(s) | 372 |
| Cfr42I | CCGCGG | 1 cut(s) | 177 |
| Cfr9I | CCCGGG | 1 cut(s) | 9 |
| Csp6I | GTAC | 3 cut(s) | 409, 422, 448 |
| CviAII | CATG | 1 cut(s) | 230 |
| CviJI | RGCY | 7 cut(s) | 27, 199, 241, 253, 356, 385, 479 |
| CviKI_1 | RGCY | 7 cut(s) | 27, 199, 241, 253, 356, 385, 479 |
| CviQI | GTAC | 3 cut(s) | 409, 422, 448 |
| DdeI | CTNAG | 1 cut(s) | 482 |
| DinI | GGCGCC | 2 cut(s) | 183, 225 |
| DpnI | GATC | 3 cut(s) | 15, 110, 172 |
| DpnII | GATC | 3 cut(s) | 13, 108, 170 |
| EaeI | YGGCCR | 1 cut(s) | 354 |
| Eco105I | TACGTA | 1 cut(s) | 281 |
| Eco130I | CCWWGG | 1 cut(s) | 247 |
| Eco24I | GRGCYC | 1 cut(s) | 481 |
| Eco31I | GGTCTC | 1 cut(s) | 137 |
| Eco32I | GATATC | 1 cut(s) | 55 |
| Eco88I | CYCGRG | 1 cut(s) | 9 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 307 |
| EcoRV | GATATC | 1 cut(s) | 55 |
| EcoT14I | CCWWGG | 1 cut(s) | 247 |
| EcoT38I | GRGCYC | 1 cut(s) | 481 |
| EgeI | GGCGCC | 2 cut(s) | 183, 225 |
| EheI | GGCGCC | 2 cut(s) | 183, 225 |
| ErhI | CCWWGG | 1 cut(s) | 247 |
| FaeI | CATG | 1 cut(s) | 233 |
| FaiI | YATR | 8 cut(s) | 103, 231, 309, 350, 392, 413, 444, 495 |
| FaqI | GGGAC | 1 cut(s) | 377 |
| FatI | CATG | 1 cut(s) | 229 |
| FauI | CCCGC | 1 cut(s) | 354 |
| Fnu4HI | GCNGC | 5 cut(s) | 185, 200, 227, 266, 463 |
| FokI | GGATG | 3 cut(s) | 179, 228, 306 |
| FriOI | GRGCYC | 1 cut(s) | 481 |
| Fsp4HI | GCNGC | 5 cut(s) | 185, 200, 227, 266, 463 |
| GlaI | GCGC | 4 cut(s) | 71, 183, 225, 406 |
| GluI | GCNGC | 5 cut(s) | 185, 200, 227, 266, 463 |
| HaeII | RGCGCY | 2 cut(s) | 185, 227 |
| HaeIII | GGCC | 3 cut(s) | 27, 356, 385 |
| HapII | CCGG | 6 cut(s) | 10, 83, 106, 188, 213, 373 |
| HhaI | GCGC | 4 cut(s) | 72, 184, 226, 407 |
| Hin1I | GRCGYC | 2 cut(s) | 182, 224 |
| Hin1II | CATG | 1 cut(s) | 233 |
| Hin6I | GCGC | 4 cut(s) | 70, 182, 224, 405 |
| HinP1I | GCGC | 4 cut(s) | 70, 182, 224, 405 |
| HincII | GTYRAC | 1 cut(s) | 318 |
| HindII | GTYRAC | 1 cut(s) | 318 |
| HinfI | GANTC | 2 cut(s) | 204, 319 |
| HpaII | CCGG | 6 cut(s) | 10, 83, 106, 188, 213, 373 |
| HphI | GGTGA | 1 cut(s) | 167 |
| Hpy166II | GTNNAC | 2 cut(s) | 318, 470 |
| Hpy188I | TCNGA | 1 cut(s) | 324 |
| Hpy188III | TCNNGA | 2 cut(s) | 34, 128 |
| Hpy8I | GTNNAC | 2 cut(s) | 318, 470 |
| Hpy99I | CGWCG | 2 cut(s) | 21, 152 |
| HpyAV | CCTTC | 4 cut(s) | 38, 80, 146, 396 |
| HpyCH4III | ACNGT | 2 cut(s) | 62, 452 |
| HpyCH4IV | ACGT | 1 cut(s) | 280 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 41, 265, 382 |
| HpyF3I | CTNAG | 1 cut(s) | 482 |
| HpySE526I | ACGT | 1 cut(s) | 280 |
| Hsp92I | GRCGYC | 2 cut(s) | 182, 224 |
| Hsp92II | CATG | 1 cut(s) | 233 |
| HspAI | GCGC | 4 cut(s) | 70, 182, 224, 405 |
| KasI | GGCGCC | 2 cut(s) | 181, 223 |
| KpnI | GGTACC | 1 cut(s) | 451 |
| KroI | GCCGGC | 1 cut(s) | 372 |
| KroNI | GCCGGC | 1 cut(s) | 374 |
| KspI | CCGCGG | 1 cut(s) | 177 |
| Kzo9I | GATC | 3 cut(s) | 13, 108, 170 |
| LmnI | GCTCC | 2 cut(s) | 98, 246 |
| LpnPI | CCDG | 8 cut(s) | 23, 96, 119, 201, 226, 251, 282, 386 |
| Lsp1109I | GCAGC | 2 cut(s) | 186, 252 |
| LweI | GCATC | 1 cut(s) | 284 |
| MaeII | ACGT | 1 cut(s) | 280 |
| MaeIII | GTNAC | 1 cut(s) | 485 |
| MalI | GATC | 3 cut(s) | 15, 110, 172 |
| MboI | GATC | 3 cut(s) | 13, 108, 170 |
| MflI | RGATCY | 2 cut(s) | 108, 170 |
| MhlI | GDGCHC | 1 cut(s) | 481 |
| MlsI | TGGCCA | 1 cut(s) | 356 |
| MluCI | AATT | 2 cut(s) | 90, 398 |
| MluNI | TGGCCA | 1 cut(s) | 356 |
| Mly113I | GGCGCC | 2 cut(s) | 182, 224 |
| MlyI | GAGTC | 1 cut(s) | 313 |
| MnlI | CCTC | 7 cut(s) | 30, 122, 157, 172, 218, 512, 514 |
| Mox20I | TGGCCA | 1 cut(s) | 356 |
| MroNI | GCCGGC | 1 cut(s) | 372 |
| MscI | TGGCCA | 1 cut(s) | 356 |
| Msp20I | TGGCCA | 1 cut(s) | 356 |
| MspA1I | CMGCKG | 2 cut(s) | 176, 265 |
| MspI | CCGG | 6 cut(s) | 10, 83, 106, 188, 213, 373 |
| MspR9I | CCNGG | 3 cut(s) | 10, 11, 213 |
| Mva1269I | GAATGC | 1 cut(s) | 331 |
| MvnI | CGCG | 6 cut(s) | 35, 72, 176, 361, 405, 407 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 41, 265, 382 |
| NaeI | GCCGGC | 1 cut(s) | 374 |
| NarI | GGCGCC | 2 cut(s) | 182, 224 |
| NciI | CCSGG | 3 cut(s) | 10, 11, 213 |
| NdeII | GATC | 3 cut(s) | 13, 108, 170 |
| NgoMIV | GCCGGC | 1 cut(s) | 372 |
| NlaIII | CATG | 1 cut(s) | 233 |
| NlaIV | GGNNCC | 5 cut(s) | 110, 172, 183, 225, 449 |
| NruI | TCGCGA | 1 cut(s) | 35 |
| PctI | GAATGC | 1 cut(s) | 331 |
| PdiI | GCCGGC | 1 cut(s) | 374 |
| PfeI | GAWTC | 1 cut(s) | 204 |
| PkrI | GCNGC | 5 cut(s) | 186, 201, 228, 267, 464 |
| PleI | GAGTC | 1 cut(s) | 313 |
| PluTI | GGCGCC | 2 cut(s) | 185, 227 |
| PpsI | GAGTC | 1 cut(s) | 313 |
| Ppu21I | YACGTR | 1 cut(s) | 281 |
| PspN4I | GGNNCC | 5 cut(s) | 110, 172, 183, 225, 449 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 401, 433 |
| PsuI | RGATCY | 2 cut(s) | 108, 170 |
| RruI | TCGCGA | 1 cut(s) | 35 |
| RsaI | GTAC | 3 cut(s) | 410, 423, 449 |
| RsaNI | GTAC | 3 cut(s) | 409, 422, 448 |
| SacII | CCGCGG | 1 cut(s) | 177 |
| SatI | GCNGC | 5 cut(s) | 185, 200, 227, 266, 463 |
| Sau3AI | GATC | 3 cut(s) | 13, 108, 170 |
| SchI | GAGTC | 1 cut(s) | 313 |
| ScrFI | CCNGG | 3 cut(s) | 10, 11, 213 |
| SduI | GDGCHC | 1 cut(s) | 481 |
| SetI | ASST | 7 cut(s) | 157, 243, 283, 305, 449, 504, 519 |
| SfaNI | GCATC | 1 cut(s) | 284 |
| SfoI | GGCGCC | 2 cut(s) | 183, 225 |
| Sfr303I | CCGCGG | 1 cut(s) | 177 |
| SgrBI | CCGCGG | 1 cut(s) | 177 |
| SmaI | CCCGGG | 1 cut(s) | 11 |
| SmlI | CTYRAG | 1 cut(s) | 425 |
| SmoI | CTYRAG | 1 cut(s) | 425 |
| SnaBI | TACGTA | 1 cut(s) | 281 |
| Sse9I | AATT | 2 cut(s) | 90, 398 |
| SspDI | GGCGCC | 2 cut(s) | 181, 223 |
| SspI | AATATT | 1 cut(s) | 342 |
| StyD4I | CCNGG | 3 cut(s) | 8, 9, 211 |
| StyI | CCWWGG | 1 cut(s) | 247 |
| TaaI | ACNGT | 2 cut(s) | 62, 452 |
| TaiI | ACGT | 1 cut(s) | 283 |
| TaqI | TCGA | 4 cut(s) | 57, 114, 129, 334 |
| TaqII | GACCGA | 1 cut(s) | 161 |
| TasI | AATT | 2 cut(s) | 90, 398 |
| TauI | GCSGC | 3 cut(s) | 187, 229, 465 |
| TfiI | GAWTC | 1 cut(s) | 204 |
| TseI | GCWGC | 2 cut(s) | 199, 265 |
| TspDTI | ATGAA | 1 cut(s) | 411 |
| TspMI | CCCGGG | 1 cut(s) | 9 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 307 |
| XmaI | CCCGGG | 1 cut(s) | 9 |