Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000087

Physical Location & Seq

Genomic Coordinates Forward (+)

55246496 .. 55248767

Gene Structure 2272 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGAGTCGGAGCTTCGATCCAGTCGACCCCCTTCTGGGCTGCTCTCTCTTCCCCAAGGCCAAGTTCTCGTCTGACCCTTCCAAGCCCTACGAATTCGACCACGACCTCCAAGCCATCGACCTCTACCTTAAGTCCACCACGGCCTCACTATCTGGTCTTAAAGATCACGCGAAGAACATTTCAAGTGGCAGTTCCGCTATTCCGCAGTCTGACATGTCACAAGCATTGAAATGCCTAAAGGTTACAGTGAAAGTTCCAAAGAAGAAACCATGTAGAGGGAAACCCATTGAAAAGATGGATGATCTGGCACTACTGGATGAGCTGATTAATGAAGGGGAGGATTCGCTCCACATCAACGTTGATCTGGACACCGGGAAGGTTAACCTGACCGAGGAAGAGGTCCTCTTGGAGATACCCGATGAGTTCGTGGAGGCTGAAGAAGACTTACAGCCTAGTGAGAAGAAGAAAAGAAAACATCACCATCACCGAGATAGCGAGGTCACCTACACTGGCAAGAACGTAGTGGGTGCCGATGCCAAGAAGCCCAGAGTGAGTCATCAGATGACACCGGAAACTTCTCAGTCTCCTGGTCTTCTGGCTCCGAACGTCCGGGTCGTTCCTAAGAAACCCATCAAGCAGCTCTTTGCCCGGTACGGGGTGGCGGATGAGAAGTTCGTCCGGTCCATGCTGGCAGACCTTAAGGATATAGACCTTGACCTGGTGCGAGCCAAGGACAACTCCCCGCAAGAGAACCATAGGATTGCCCGGGAATCCGTGATGCGGGCCCTGTACAATGTGTACGCGATCGATGCTAGTGAAGAGGGCACCCAGTTGAAGGAAGAGGTGAGCAACCTCTCCGAGAAGGTGAAGTACCTTCATGGGGAAAAAGGGAAGCTGGAGAAAGAGCGTGACACTCTAAATCAAAATATTGCTGCCCTGACCTTGAAGGTAAGTGAGCTAGAAGAGGAGAGGAAGAAGATTCCAGCACTGGAGGGTCAGGTGGAAGGGCTGAGGAAGGAGCTGGAGCCTCTGCGGGGTTTTGAGGAGAAGGCCAACTCCTGGAAAGCCAAGGCCGAGTATCTGGAGGGCCAGATTGATGAAGAGTGCCAACAAGCTGTTGAGGAGTACAAGGGATCCCAAGAACTGGTGAACTTGCTGTTGGCTGCTAGGAGCAAATGTATCTCGGAGAAATACCGCGAGTGGTCTGCCTCTGGTTGGATCGATGCTGAAAAGATGAAGCGGGAGGTAGCAGAGATGAAGAGGAAAAGGCAGGAGGAGCAAGCCAGGAAGGAAGCAGAATCCAAGAGTGGTCGTTCTGGGAGTCATACCGAGGCTCAAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006996 GO:0007049 GO:0007059 GO:0007080 GO:0007127 GO:0008150 GO:0008608 GO:0009987 GO:0016043 GO:0019237 GO:0022402 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032991 GO:0034508 GO:0034622 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051316 GO:0051321 GO:0051382 GO:0051383 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0061982 GO:0065003 GO:0065004 GO:0070013 GO:0070925 GO:0071824 GO:0071840 GO:0097159 GO:0098687 GO:0098813 GO:0140013 GO:0140014 GO:1901363 GO:1903046 GO:1903047 GO:1990837

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

447

Amino Acids

50.45

Weight (kDa)

5.76

Isoelectric Point (pI)

47.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000087)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis	RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata	RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora	Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii	Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa	Rorug06G0076500
rosa_samantha	Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana	Rw1G021100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	527, 824
AccB7I	CCANNNNNTGG	2 cut(s)	1059, 1144
AccI	GTMKAC	1 cut(s)	24
AccII	CGCG	3 cut(s)	170, 803, 1197
AciI	CCGC	8 cut(s)	195, 203, 662, 743, 781, 1033, 1195, 1240
AclI	AACGTT	1 cut(s)	357
AclWI	GGATC	4 cut(s)	11, 1128, 1141, 1226
AcsI	RAATTY	1 cut(s)	92
AcuI	CTGAAG	1 cut(s)	456
AfaI	GTAC	5 cut(s)	653, 791, 800, 872, 1127
AflII	CTTAAG	2 cut(s)	128, 698
AflIII	ACRYGT	1 cut(s)	213
AgsI	TTSAA	5 cut(s)	183, 229, 290, 835, 946
AjnI	CCWGG	4 cut(s)	586, 717, 1058, 1283
AjuI	GAANNNNNNNTTGG	4 cut(s)	47, 79, 1142, 1174
AloI	GAACNNNNNNTCC	2 cut(s)	656, 688
AluBI	AGCT	7 cut(s)	12, 322, 640, 895, 958, 1021, 1115
AluI	AGCT	7 cut(s)	12, 322, 640, 895, 958, 1021, 1115
Alw26I	GTCTC	1 cut(s)	588
AlwI	GGATC	4 cut(s)	11, 1128, 1141, 1226
Ama87I	CYCGRG	1 cut(s)	765
AoxI	GGCC	6 cut(s)	57, 141, 783, 1050, 1071, 1087
ApaI	GGGCCC	1 cut(s)	787
ApeKI	GCWGC	4 cut(s)	39, 637, 932, 1163
ApoI	RAATTY	1 cut(s)	92
AseI	ATTAAT	1 cut(s)	327
AspS9I	GGNCC	5 cut(s)	400, 681, 783, 784, 1087
AsuC2I	CCSGG	5 cut(s)	373, 611, 649, 766, 767
AsuHPI	GGTGA	6 cut(s)	470, 476, 493, 856, 877, 1159
AvaI	CYCGRG	1 cut(s)	765
AvaII	GGWCC	2 cut(s)	400, 681
BaeGI	GKGCMC	2 cut(s)	787, 827
BamHI	GGATCC	1 cut(s)	1133
BanI	GGYRCC	2 cut(s)	527, 824
BanII	GRGCYC	1 cut(s)	787
BarI	GAAGNNNNNNTAC	4 cut(s)	429, 461, 854, 886
BbsI	GAAGAC	2 cut(s)	447, 584
BbvCI	CCTCAGC	1 cut(s)	1010
BbvI	GCAGC	4 cut(s)	26, 649, 919, 1150
BccI	CCATC	4 cut(s)	122, 289, 489, 638
BceAI	ACGGC	1 cut(s)	156
BcgI	CGANNNNNNTGC	2 cut(s)	1187, 1221
BciT130I	CCWGG	4 cut(s)	588, 719, 1060, 1285
BcnI	CCSGG	5 cut(s)	373, 611, 649, 766, 767
BcoDI	GTCTC	1 cut(s)	588
BfaI	CTAG	4 cut(s)	453, 813, 959, 1167
BfrI	CTTAAG	2 cut(s)	128, 698
BisI	GCNGC	4 cut(s)	40, 638, 933, 1164
BlsI	GCNGC	4 cut(s)	41, 639, 934, 1165
Bme1390I	CCNGG	9 cut(s)	373, 588, 611, 649, 719, 766, 767, 1060, 1285
Bme18I	GGWCC	2 cut(s)	400, 681
BmeT110I	CYCGRG	1 cut(s)	765
BmgT120I	GGNCC	5 cut(s)	400, 681, 783, 784, 1087
BmiI	GGNNCC	6 cut(s)	529, 600, 785, 826, 1026, 1135
BmrFI	CCNGG	9 cut(s)	373, 588, 611, 649, 719, 766, 767, 1060, 1285
BmrI	ACTGGG	1 cut(s)	823
BmsI	GCATC	4 cut(s)	523, 768, 799, 1213
BmuI	ACTGGG	1 cut(s)	823
BpiI	GAAGAC	2 cut(s)	447, 584
BpmI	CTGGAG	4 cut(s)	917, 1010, 1043, 1103
Bpu10I	CCTNAGC	1 cut(s)	1010
BpuEI	CTTGAG	1 cut(s)	1320
BpuMI	CCSGG	5 cut(s)	373, 611, 649, 766, 767
Bsa29I	ATCGAT	2 cut(s)	807, 1221
BsaJI	CCNNGG	7 cut(s)	54, 138, 390, 729, 765, 1068, 1329
BsaWI	WCCGGW	2 cut(s)	568, 678
BsaXI	ACNNNNNCTCC	2 cut(s)	1162, 1192
Bse1I	ACTGG	6 cut(s)	20, 318, 514, 829, 993, 1149
BseBI	CCWGG	4 cut(s)	588, 719, 1060, 1285
BseCI	ATCGAT	2 cut(s)	807, 1221
BseDI	CCNNGG	7 cut(s)	54, 138, 390, 729, 765, 1068, 1329
BseGI	GGATG	3 cut(s)	304, 322, 670
BseMII	CTCAG	2 cut(s)	593, 1001
BseNI	ACTGG	6 cut(s)	20, 318, 514, 829, 993, 1149
BseRI	GAGGAG	4 cut(s)	980, 1058, 1136, 1289
BseSI	GKGCMC	2 cut(s)	787, 827
BseXI	GCAGC	4 cut(s)	26, 649, 919, 1150
Bsh1236I	CGCG	3 cut(s)	170, 803, 1197
Bsh1285I	CGRYCG	1 cut(s)	807
BshFI	GGCC	6 cut(s)	59, 143, 785, 1052, 1073, 1089
BshNI	GGYRCC	2 cut(s)	527, 824
BshVI	ATCGAT	2 cut(s)	807, 1221
BsiEI	CGRYCG	1 cut(s)	807
BsiHKCI	CYCGRG	1 cut(s)	765
BsiSI	CCGG	6 cut(s)	372, 569, 610, 649, 679, 766
BsmAI	GTCTC	1 cut(s)	588
BsnI	GGCC	6 cut(s)	59, 143, 785, 1052, 1073, 1089
BsoBI	CYCGRG	1 cut(s)	765
Bsp120I	GGGCCC	1 cut(s)	783
Bsp1286I	GDGCHC	2 cut(s)	787, 827
Bsp1407I	TGTACA	1 cut(s)	789
Bsp143I	GATC	7 cut(s)	16, 163, 301, 361, 804, 1133, 1218
BspACI	CCGC	8 cut(s)	195, 203, 662, 743, 781, 1033, 1195, 1240
BspANI	GGCC	6 cut(s)	59, 143, 785, 1052, 1073, 1089
BspCNI	CTCAG	2 cut(s)	592, 1002
BspDI	ATCGAT	2 cut(s)	807, 1221
BspFNI	CGCG	3 cut(s)	170, 803, 1197
BspLI	GGNNCC	6 cut(s)	529, 600, 785, 826, 1026, 1135
BspPI	GGATC	4 cut(s)	11, 1128, 1141, 1226
BspT107I	GGYRCC	2 cut(s)	527, 824
BspTI	CTTAAG	2 cut(s)	128, 698
BsrGI	TGTACA	1 cut(s)	789
BsrI	ACTGG	6 cut(s)	20, 318, 514, 829, 993, 1149
BssECI	CCNNGG	7 cut(s)	54, 138, 390, 729, 765, 1068, 1329
BssMI	GATC	7 cut(s)	16, 163, 301, 361, 804, 1133, 1218
BssT1I	CCWWGG	3 cut(s)	54, 729, 1068
Bst2UI	CCWGG	4 cut(s)	588, 719, 1060, 1285
Bst4CI	ACNGT	1 cut(s)	247
Bst6I	CTCTTC	7 cut(s)	53, 390, 813, 834, 957, 1095, 1253
BstAFI	CTTAAG	2 cut(s)	128, 698
BstAUI	TGTACA	1 cut(s)	789
BstC8I	GCNNGC	4 cut(s)	690, 726, 783, 1281
BstDEI	CTNAG	3 cut(s)	579, 621, 1010
BstDSI	CCRYGG	1 cut(s)	138
BstEII	GGTNACC	1 cut(s)	499
BstENI	CCTNNNNNAGG	1 cut(s)	389
BstF5I	GGATG	3 cut(s)	304, 322, 670
BstFNI	CGCG	3 cut(s)	170, 803, 1197
BstKTI	GATC	7 cut(s)	19, 166, 304, 364, 807, 1136, 1221
BstMAI	GTCTC	1 cut(s)	588
BstMBI	GATC	7 cut(s)	16, 163, 301, 361, 804, 1133, 1218
BstMCI	CGRYCG	1 cut(s)	807
BstMWI	GCNNNNNNNGC	2 cut(s)	809, 1276
BstNI	CCWGG	4 cut(s)	588, 719, 1060, 1285
BstNSI	RCATGY	1 cut(s)	217
BstPI	GGTNACC	1 cut(s)	499
BstSCI	CCNGG	9 cut(s)	371, 586, 609, 647, 717, 764, 765, 1058, 1283
BstSLI	GKGCMC	2 cut(s)	787, 827
BstUI	CGCG	3 cut(s)	170, 803, 1197
BstV1I	GCAGC	4 cut(s)	26, 649, 919, 1150
BstV2I	GAAGAC	2 cut(s)	447, 584
BstX2I	RGATCY	1 cut(s)	1133
BstYI	RGATCY	1 cut(s)	1133
Bsu15I	ATCGAT	2 cut(s)	807, 1221
BsuRI	GGCC	6 cut(s)	59, 143, 785, 1052, 1073, 1089
BsuTUI	ATCGAT	2 cut(s)	807, 1221
BtgI	CCRYGG	1 cut(s)	138
BtsCI	GGATG	3 cut(s)	304, 322, 670
BtsIMutI	CAGTG	3 cut(s)	252, 507, 986
Cac8I	GCNNGC	4 cut(s)	690, 726, 783, 1281
Cfr13I	GGNCC	5 cut(s)	400, 681, 783, 784, 1087
Cfr9I	CCCGGG	1 cut(s)	765
ClaI	ATCGAT	2 cut(s)	807, 1221
CsiI	ACCWGGT	1 cut(s)	717
Csp6I	GTAC	5 cut(s)	652, 790, 799, 871, 1126
CviAII	CATG	4 cut(s)	214, 270, 685, 878
CviQI	GTAC	5 cut(s)	652, 790, 799, 871, 1126
DdeI	CTNAG	3 cut(s)	579, 621, 1010
DpnI	GATC	7 cut(s)	18, 165, 303, 363, 806, 1135, 1220
DpnII	GATC	7 cut(s)	16, 163, 301, 361, 804, 1133, 1218
Eam1104I	CTCTTC	7 cut(s)	53, 390, 813, 834, 957, 1095, 1253
EarI	CTCTTC	7 cut(s)	53, 390, 813, 834, 957, 1095, 1253
EciI	GGCGGA	1 cut(s)	677
Eco130I	CCWWGG	3 cut(s)	54, 729, 1068
Eco24I	GRGCYC	1 cut(s)	787
Eco47I	GGWCC	2 cut(s)	400, 681
Eco57I	CTGAAG	1 cut(s)	456
Eco88I	CYCGRG	1 cut(s)	765
Eco91I	GGTNACC	1 cut(s)	499
EcoNI	CCTNNNNNAGG	1 cut(s)	389
EcoO109I	RGGNCCY	2 cut(s)	400, 784
EcoO65I	GGTNACC	1 cut(s)	499
EcoRI	GAATTC	1 cut(s)	92
EcoRII	CCWGG	4 cut(s)	586, 717, 1058, 1283
EcoT14I	CCWWGG	3 cut(s)	54, 729, 1068
EcoT38I	GRGCYC	1 cut(s)	787
ErhI	CCWWGG	3 cut(s)	54, 729, 1068
FaeI	CATG	4 cut(s)	217, 273, 688, 881
FaiI	YATR	7 cut(s)	215, 271, 686, 707, 756, 879, 1326
FalI	AAGNNNNNCTT	2 cut(s)	626, 658
FatI	CATG	4 cut(s)	213, 269, 684, 877
FauI	CCCGC	4 cut(s)	750, 774, 1026, 1233
FblI	GTMKAC	1 cut(s)	24
Fnu4HI	GCNGC	4 cut(s)	40, 638, 933, 1164
FokI	GGATG	3 cut(s)	311, 329, 677
FriOI	GRGCYC	1 cut(s)	787
Fsp4HI	GCNGC	4 cut(s)	40, 638, 933, 1164
FspBI	CTAG	4 cut(s)	453, 813, 959, 1167
GluI	GCNGC	4 cut(s)	40, 638, 933, 1164
GsuI	CTGGAG	4 cut(s)	917, 1010, 1043, 1103
HaeIII	GGCC	6 cut(s)	59, 143, 785, 1052, 1073, 1089
HapII	CCGG	6 cut(s)	372, 569, 610, 649, 679, 766
Hin1II	CATG	4 cut(s)	217, 273, 688, 881
HincII	GTYRAC	2 cut(s)	25, 382
HindII	GTYRAC	2 cut(s)	25, 382
HinfI	GANTC	7 cut(s)	4, 341, 553, 770, 979, 1298, 1321
HpaI	GTTAAC	1 cut(s)	382
HpaII	CCGG	6 cut(s)	372, 569, 610, 649, 679, 766
HphI	GGTGA	6 cut(s)	470, 476, 493, 856, 877, 1159
Hpy166II	GTNNAC	5 cut(s)	25, 135, 382, 799, 1150
Hpy188I	TCNGA	7 cut(s)	9, 73, 211, 561, 603, 859, 1186
Hpy188III	TCNNGA	3 cut(s)	365, 1082, 1337
Hpy8I	GTNNAC	5 cut(s)	25, 135, 382, 799, 1150
HpyCH4III	ACNGT	1 cut(s)	247
HpyCH4IV	ACGT	3 cut(s)	357, 519, 606
HpyF10VI	GCNNNNNNNGC	2 cut(s)	809, 1276
HpyF3I	CTNAG	3 cut(s)	579, 621, 1010
HpySE526I	ACGT	3 cut(s)	357, 519, 606
Hsp92II	CATG	4 cut(s)	217, 273, 688, 881
KspAI	GTTAAC	1 cut(s)	382
Kzo9I	GATC	7 cut(s)	16, 163, 301, 361, 804, 1133, 1218
LmnI	GCTCC	7 cut(s)	9, 351, 604, 1018, 1024, 1170, 1276
Lsp1109I	GCAGC	4 cut(s)	26, 649, 919, 1150
LweI	GCATC	4 cut(s)	523, 768, 799, 1213
MabI	ACCWGGT	1 cut(s)	717
MaeI	CTAG	4 cut(s)	453, 813, 959, 1167
MaeII	ACGT	3 cut(s)	357, 519, 606
MaeIII	GTNAC	4 cut(s)	216, 241, 499, 908
MalI	GATC	7 cut(s)	18, 165, 303, 363, 806, 1135, 1220
MboI	GATC	7 cut(s)	16, 163, 301, 361, 804, 1133, 1218
MflI	RGATCY	1 cut(s)	1133
MhlI	GDGCHC	2 cut(s)	787, 827
MluCI	AATT	1 cut(s)	92
MlyI	GAGTC	3 cut(s)	13, 562, 1330
MmeI	TCCRAC	1 cut(s)	1196
MseI	TTAA	5 cut(s)	129, 159, 327, 381, 699
MslI	CAYNNNNRTG	1 cut(s)	229
MspCI	CTTAAG	2 cut(s)	128, 698
MspI	CCGG	6 cut(s)	372, 569, 610, 649, 679, 766
MspR9I	CCNGG	9 cut(s)	373, 588, 611, 649, 719, 766, 767, 1060, 1285
MvaI	CCWGG	4 cut(s)	588, 719, 1060, 1285
MvnI	CGCG	3 cut(s)	170, 803, 1197
MwoI	GCNNNNNNNGC	2 cut(s)	809, 1276
NciI	CCSGG	5 cut(s)	373, 611, 649, 766, 767
NdeII	GATC	7 cut(s)	16, 163, 301, 361, 804, 1133, 1218
NlaIII	CATG	4 cut(s)	217, 273, 688, 881
NlaIV	GGNNCC	6 cut(s)	529, 600, 785, 826, 1026, 1135
NmeAIII	GCCGAG	1 cut(s)	1099
NmuCI	GTSAC	3 cut(s)	216, 499, 908
NspI	RCATGY	1 cut(s)	217
PciI	ACATGT	1 cut(s)	213
PcsI	WCGNNNNNNNCGW	2 cut(s)	21, 612
PfeI	GAWTC	4 cut(s)	341, 770, 979, 1298
PflMI	CCANNNNNTGG	2 cut(s)	1059, 1144
PfoI	TCCNGGA	1 cut(s)	1058
PkrI	GCNGC	4 cut(s)	41, 639, 934, 1165
Ple19I	CGATCG	1 cut(s)	807
PleI	GAGTC	3 cut(s)	12, 561, 1329
PpsI	GAGTC	3 cut(s)	12, 561, 1329
PpuMI	RGGWCCY	1 cut(s)	400
PscI	ACATGT	1 cut(s)	213
PshBI	ATTAAT	1 cut(s)	327
Psp1406I	AACGTT	1 cut(s)	357
Psp5II	RGGWCCY	1 cut(s)	400
Psp6I	CCWGG	4 cut(s)	586, 717, 1058, 1283
PspEI	GGTNACC	1 cut(s)	499
PspGI	CCWGG	4 cut(s)	586, 717, 1058, 1283
PspN4I	GGNNCC	6 cut(s)	529, 600, 785, 826, 1026, 1135
PspOMI	GGGCCC	1 cut(s)	783
PspPI	GGNCC	5 cut(s)	400, 681, 783, 784, 1087
PspPPI	RGGWCCY	1 cut(s)	400
PsuI	RGATCY	1 cut(s)	1133
PvuI	CGATCG	1 cut(s)	807
RsaI	GTAC	5 cut(s)	653, 791, 800, 872, 1127
RsaNI	GTAC	5 cut(s)	652, 790, 799, 871, 1126
RseI	CAYNNNNRTG	1 cut(s)	229
SalI	GTCGAC	1 cut(s)	23
SaqAI	TTAA	5 cut(s)	129, 159, 327, 381, 699
SatI	GCNGC	4 cut(s)	40, 638, 933, 1164
Sau3AI	GATC	7 cut(s)	16, 163, 301, 361, 804, 1133, 1218
Sau96I	GGNCC	5 cut(s)	400, 681, 783, 784, 1087
SchI	GAGTC	3 cut(s)	13, 562, 1330
ScrFI	CCNGG	9 cut(s)	373, 588, 611, 649, 719, 766, 767, 1060, 1285
SduI	GDGCHC	2 cut(s)	787, 827
SexAI	ACCWGGT	1 cut(s)	717
SfaNI	GCATC	4 cut(s)	523, 768, 799, 1213
SinI	GGWCC	2 cut(s)	400, 681
SmaI	CCCGGG	1 cut(s)	767
SmiMI	CAYNNNNRTG	1 cut(s)	229
SmlI	CTYRAG	3 cut(s)	128, 698, 1335
SmoI	CTYRAG	3 cut(s)	128, 698, 1335
Sse9I	AATT	1 cut(s)	92
SsiI	CCGC	8 cut(s)	195, 203, 662, 743, 781, 1033, 1195, 1240
SspI	AATATT	1 cut(s)	928
SspMI	CTAG	4 cut(s)	453, 813, 959, 1167
StyD4I	CCNGG	9 cut(s)	371, 586, 609, 647, 717, 764, 765, 1058, 1283
StyI	CCWWGG	3 cut(s)	54, 729, 1068
TaaI	ACNGT	1 cut(s)	247
TaiI	ACGT	3 cut(s)	360, 522, 609
TaqI	TCGA	6 cut(s)	15, 24, 96, 117, 807, 1221
TaqII	GACCGA	1 cut(s)	404
TasI	AATT	1 cut(s)	92
TatI	WGTACW	2 cut(s)	789, 1125
TfiI	GAWTC	4 cut(s)	341, 770, 979, 1298
Tru1I	TTAA	5 cut(s)	129, 159, 327, 381, 699
Tru9I	TTAA	5 cut(s)	129, 159, 327, 381, 699
TscAI	CASTG	3 cut(s)	252, 514, 993
TseFI	GTSAC	3 cut(s)	216, 499, 908
TseI	GCWGC	4 cut(s)	39, 637, 932, 1163
Tsp45I	GTSAC	3 cut(s)	216, 499, 908
TspDTI	ATGAA	5 cut(s)	345, 866, 1113, 1250, 1271
TspGWI	ACGGA	1 cut(s)	763
TspMI	CCCGGG	1 cut(s)	765
TspRI	CASTG	3 cut(s)	252, 514, 993
Van91I	CCANNNNNTGG	2 cut(s)	1059, 1144
Vha464I	CTTAAG	2 cut(s)	128, 698
VpaK11BI	GGWCC	2 cut(s)	400, 681
VspI	ATTAAT	1 cut(s)	327
XagI	CCTNNNNNAGG	1 cut(s)	389
XapI	RAATTY	1 cut(s)	92
XceI	RCATGY	1 cut(s)	217
XcmI	CCANNNNNNNNNTGG	1 cut(s)	292
XmaI	CCCGGG	1 cut(s)	765
XmiI	GTMKAC	1 cut(s)	24
XspI	CTAG	4 cut(s)	453, 813, 959, 1167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.