source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 267, 426 |
| Acc16I | TGCGCA | 1 cut(s) | 783 |
| AciI | CCGC | 4 cut(s) | 72, 981, 987, 1038 |
| AclWI | GGATC | 1 cut(s) | 229 |
| AcsI | RAATTY | 4 cut(s) | 114, 437, 719, 1076 |
| AcuI | CTGAAG | 3 cut(s) | 69, 98, 810 |
| AcyI | GRCGYC | 2 cut(s) | 264, 423 |
| AfaI | GTAC | 3 cut(s) | 229, 303, 528 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1043 |
| AgsI | TTSAA | 6 cut(s) | 120, 379, 556, 836, 857, 1130 |
| AjnI | CCWGG | 1 cut(s) | 646 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 953, 985 |
| AluBI | AGCT | 4 cut(s) | 82, 331, 794, 832 |
| AluI | AGCT | 4 cut(s) | 82, 331, 794, 832 |
| Alw26I | GTCTC | 1 cut(s) | 255 |
| AlwI | GGATC | 1 cut(s) | 229 |
| AoxI | GGCC | 1 cut(s) | 920 |
| ApeKI | GCWGC | 3 cut(s) | 82, 1033, 1060 |
| ApoI | RAATTY | 4 cut(s) | 114, 437, 719, 1076 |
| AseI | ATTAAT | 1 cut(s) | 756 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 374, 913 |
| AspLEI | GCGC | 1 cut(s) | 784 |
| AspS9I | GGNCC | 1 cut(s) | 151 |
| AsuHPI | GGTGA | 2 cut(s) | 182, 962 |
| AvaII | GGWCC | 1 cut(s) | 151 |
| BbvI | GCAGC | 3 cut(s) | 69, 1045, 1072 |
| BccI | CCATC | 3 cut(s) | 529, 986, 995 |
| BciT130I | CCWGG | 1 cut(s) | 648 |
| BcoDI | GTCTC | 1 cut(s) | 255 |
| BfaI | CTAG | 2 cut(s) | 821, 918 |
| BfmI | CTRYAG | 2 cut(s) | 354, 585 |
| BisI | GCNGC | 4 cut(s) | 83, 988, 1034, 1061 |
| BlsI | GCNGC | 4 cut(s) | 84, 989, 1035, 1062 |
| Bme1390I | CCNGG | 1 cut(s) | 648 |
| Bme18I | GGWCC | 1 cut(s) | 151 |
| BmgT120I | GGNCC | 1 cut(s) | 151 |
| BmiI | GGNNCC | 2 cut(s) | 361, 568 |
| BmrFI | CCNGG | 1 cut(s) | 648 |
| BmrI | ACTGGG | 2 cut(s) | 19, 132 |
| BmsI | GCATC | 2 cut(s) | 359, 775 |
| BmuI | ACTGGG | 2 cut(s) | 19, 132 |
| BpmI | CTGGAG | 1 cut(s) | 429 |
| Bpu10I | CCTNAGC | 1 cut(s) | 332 |
| BpuEI | CTTGAG | 1 cut(s) | 71 |
| BsaAI | YACGTR | 1 cut(s) | 227 |
| BsaHI | GRCGYC | 2 cut(s) | 264, 423 |
| BsaJI | CCNNGG | 2 cut(s) | 133, 923 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 794, 824 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1043 |
| Bse1I | ACTGG | 4 cut(s) | 25, 73, 127, 1055 |
| Bse3DI | GCAATG | 1 cut(s) | 822 |
| BseBI | CCWGG | 1 cut(s) | 648 |
| BseDI | CCNNGG | 2 cut(s) | 133, 923 |
| BseGI | GGATG | 1 cut(s) | 478 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1043 |
| BseMI | GCAATG | 1 cut(s) | 822 |
| BseNI | ACTGG | 4 cut(s) | 25, 73, 127, 1055 |
| BseRI | GAGGAG | 1 cut(s) | 761 |
| BseXI | GCAGC | 3 cut(s) | 69, 1045, 1072 |
| BsgI | GTGCAG | 2 cut(s) | 239, 1079 |
| BshFI | GGCC | 1 cut(s) | 922 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1043 |
| BsmAI | GTCTC | 1 cut(s) | 255 |
| BsmBI | CGTCTC | 1 cut(s) | 255 |
| BsnI | GGCC | 1 cut(s) | 922 |
| Bsp1407I | TGTACA | 1 cut(s) | 301 |
| Bsp143I | GATC | 2 cut(s) | 234, 427 |
| Bsp19I | CCATGG | 1 cut(s) | 923 |
| BspACI | CCGC | 4 cut(s) | 72, 981, 987, 1038 |
| BspANI | GGCC | 1 cut(s) | 922 |
| BspHI | TCATGA | 1 cut(s) | 1101 |
| BspLI | GGNNCC | 2 cut(s) | 361, 568 |
| BspMAI | CTGCAG | 1 cut(s) | 358 |
| BspPI | GGATC | 1 cut(s) | 229 |
| BspQI | GCTCTTC | 1 cut(s) | 1017 |
| BsrDI | GCAATG | 1 cut(s) | 822 |
| BsrGI | TGTACA | 1 cut(s) | 301 |
| BsrI | ACTGG | 4 cut(s) | 25, 73, 127, 1055 |
| BssECI | CCNNGG | 2 cut(s) | 133, 923 |
| BssMI | GATC | 2 cut(s) | 234, 427 |
| BssNI | GRCGYC | 2 cut(s) | 264, 423 |
| BssT1I | CCWWGG | 1 cut(s) | 923 |
| Bst2UI | CCWGG | 1 cut(s) | 648 |
| Bst4CI | ACNGT | 2 cut(s) | 343, 586 |
| Bst6I | CTCTTC | 3 cut(s) | 45, 959, 1017 |
| BstACI | GRCGYC | 2 cut(s) | 264, 423 |
| BstAUI | TGTACA | 1 cut(s) | 301 |
| BstBAI | YACGTR | 1 cut(s) | 227 |
| BstC8I | GCNNGC | 6 cut(s) | 74, 222, 511, 786, 1038, 1065 |
| BstDEI | CTNAG | 3 cut(s) | 332, 433, 795 |
| BstDSI | CCRYGG | 2 cut(s) | 133, 923 |
| BstF5I | GGATG | 1 cut(s) | 478 |
| BstHHI | GCGC | 1 cut(s) | 784 |
| BstKTI | GATC | 2 cut(s) | 237, 430 |
| BstMAI | GTCTC | 1 cut(s) | 255 |
| BstMBI | GATC | 2 cut(s) | 234, 427 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 82, 88, 328, 987, 1033, 1060 |
| BstNI | CCWGG | 1 cut(s) | 648 |
| BstSCI | CCNGG | 1 cut(s) | 646 |
| BstSFI | CTRYAG | 2 cut(s) | 354, 585 |
| BstV1I | GCAGC | 3 cut(s) | 69, 1045, 1072 |
| BstX2I | RGATCY | 1 cut(s) | 234 |
| BstYI | RGATCY | 1 cut(s) | 234 |
| BsuRI | GGCC | 1 cut(s) | 922 |
| BtgI | CCRYGG | 2 cut(s) | 133, 923 |
| BtgZI | GCGATG | 2 cut(s) | 475, 1005 |
| BtsCI | GGATG | 1 cut(s) | 478 |
| BtsIMutI | CAGTG | 1 cut(s) | 1062 |
| Cac8I | GCNNGC | 6 cut(s) | 74, 222, 511, 786, 1038, 1065 |
| CciI | TCATGA | 1 cut(s) | 1101 |
| CfoI | GCGC | 1 cut(s) | 784 |
| Cfr13I | GGNCC | 1 cut(s) | 151 |
| Csp6I | GTAC | 3 cut(s) | 228, 302, 527 |
| CviAII | CATG | 5 cut(s) | 148, 406, 415, 924, 1102 |
| CviQI | GTAC | 3 cut(s) | 228, 302, 527 |
| DdeI | CTNAG | 3 cut(s) | 332, 433, 795 |
| DpnI | GATC | 2 cut(s) | 236, 429 |
| DpnII | GATC | 2 cut(s) | 234, 427 |
| Eam1104I | CTCTTC | 3 cut(s) | 45, 959, 1017 |
| EarI | CTCTTC | 3 cut(s) | 45, 959, 1017 |
| Eco130I | CCWWGG | 1 cut(s) | 923 |
| Eco47I | GGWCC | 1 cut(s) | 151 |
| Eco57I | CTGAAG | 3 cut(s) | 69, 98, 810 |
| EcoRII | CCWGG | 1 cut(s) | 646 |
| EcoT14I | CCWWGG | 1 cut(s) | 923 |
| ErhI | CCWWGG | 1 cut(s) | 923 |
| Esp3I | CGTCTC | 1 cut(s) | 255 |
| FaeI | CATG | 5 cut(s) | 151, 409, 418, 927, 1105 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 816, 848 |
| FatI | CATG | 5 cut(s) | 147, 405, 414, 923, 1101 |
| FauI | CCCGC | 2 cut(s) | 65, 1045 |
| Fnu4HI | GCNGC | 4 cut(s) | 83, 988, 1034, 1061 |
| FokI | GGATG | 1 cut(s) | 485 |
| Fsp4HI | GCNGC | 4 cut(s) | 83, 988, 1034, 1061 |
| FspBI | CTAG | 2 cut(s) | 821, 918 |
| FspI | TGCGCA | 1 cut(s) | 783 |
| GlaI | GCGC | 1 cut(s) | 783 |
| GluI | GCNGC | 4 cut(s) | 83, 988, 1034, 1061 |
| GsuI | CTGGAG | 1 cut(s) | 429 |
| HaeIII | GGCC | 1 cut(s) | 922 |
| HhaI | GCGC | 1 cut(s) | 784 |
| Hin1I | GRCGYC | 2 cut(s) | 264, 423 |
| Hin1II | CATG | 5 cut(s) | 151, 409, 418, 927, 1105 |
| Hin6I | GCGC | 1 cut(s) | 782 |
| HinP1I | GCGC | 1 cut(s) | 782 |
| HindIII | AAGCTT | 2 cut(s) | 329, 830 |
| HinfI | GANTC | 4 cut(s) | 44, 109, 459, 857 |
| HphI | GGTGA | 2 cut(s) | 182, 962 |
| Hpy166II | GTNNAC | 4 cut(s) | 137, 173, 302, 523 |
| Hpy188I | TCNGA | 4 cut(s) | 49, 253, 562, 700 |
| Hpy188III | TCNNGA | 4 cut(s) | 446, 770, 900, 1102 |
| Hpy8I | GTNNAC | 4 cut(s) | 137, 173, 302, 523 |
| Hpy99I | CGWCG | 2 cut(s) | 269, 428 |
| HpyAV | CCTTC | 3 cut(s) | 557, 678, 1124 |
| HpyCH4III | ACNGT | 2 cut(s) | 343, 586 |
| HpyCH4IV | ACGT | 4 cut(s) | 226, 264, 423, 525 |
| HpyCH4V | TGCA | 8 cut(s) | 202, 220, 350, 356, 602, 815, 1033, 1060 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 82, 88, 328, 987, 1033, 1060 |
| HpyF3I | CTNAG | 3 cut(s) | 332, 433, 795 |
| HpySE526I | ACGT | 4 cut(s) | 226, 264, 423, 525 |
| Hsp92I | GRCGYC | 2 cut(s) | 264, 423 |
| Hsp92II | CATG | 5 cut(s) | 151, 409, 418, 927, 1105 |
| HspAI | GCGC | 1 cut(s) | 782 |
| Kzo9I | GATC | 2 cut(s) | 234, 427 |
| LguI | GCTCTTC | 1 cut(s) | 1017 |
| LmnI | GCTCC | 2 cut(s) | 572, 802 |
| Lsp1109I | GCAGC | 3 cut(s) | 69, 1045, 1072 |
| LweI | GCATC | 2 cut(s) | 359, 775 |
| MaeI | CTAG | 2 cut(s) | 821, 918 |
| MaeII | ACGT | 4 cut(s) | 226, 264, 423, 525 |
| MaeIII | GTNAC | 2 cut(s) | 100, 871 |
| MalI | GATC | 2 cut(s) | 236, 429 |
| MboI | GATC | 2 cut(s) | 234, 427 |
| MflI | RGATCY | 1 cut(s) | 234 |
| MluCI | AATT | 8 cut(s) | 114, 155, 345, 437, 652, 719, 753, 1076 |
| MlyI | GAGTC | 1 cut(s) | 118 |
| MmeI | TCCRAC | 1 cut(s) | 594 |
| MroXI | GAANNNNTTC | 2 cut(s) | 374, 913 |
| MseI | TTAA | 5 cut(s) | 158, 756, 845, 882, 936 |
| MslI | CAYNNNNRTG | 1 cut(s) | 215 |
| MspR9I | CCNGG | 1 cut(s) | 648 |
| MvaI | CCWGG | 1 cut(s) | 648 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 82, 88, 328, 987, 1033, 1060 |
| NcoI | CCATGG | 1 cut(s) | 923 |
| NdeII | GATC | 2 cut(s) | 234, 427 |
| NlaIII | CATG | 5 cut(s) | 151, 409, 418, 927, 1105 |
| NlaIV | GGNNCC | 2 cut(s) | 361, 568 |
| NsbI | TGCGCA | 1 cut(s) | 783 |
| PagI | TCATGA | 1 cut(s) | 1101 |
| PciSI | GCTCTTC | 1 cut(s) | 1017 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 273 |
| PdmI | GAANNNNTTC | 2 cut(s) | 374, 913 |
| PfeI | GAWTC | 3 cut(s) | 44, 459, 857 |
| PkrI | GCNGC | 4 cut(s) | 84, 989, 1035, 1062 |
| PleI | GAGTC | 1 cut(s) | 117 |
| PpsI | GAGTC | 1 cut(s) | 117 |
| Ppu21I | YACGTR | 1 cut(s) | 227 |
| PshBI | ATTAAT | 1 cut(s) | 756 |
| Psp6I | CCWGG | 1 cut(s) | 646 |
| PspGI | CCWGG | 1 cut(s) | 646 |
| PspN4I | GGNNCC | 2 cut(s) | 361, 568 |
| PspPI | GGNCC | 1 cut(s) | 151 |
| PstI | CTGCAG | 1 cut(s) | 358 |
| PsuI | RGATCY | 1 cut(s) | 234 |
| RsaI | GTAC | 3 cut(s) | 229, 303, 528 |
| RsaNI | GTAC | 3 cut(s) | 228, 302, 527 |
| RseI | CAYNNNNRTG | 1 cut(s) | 215 |
| SapI | GCTCTTC | 1 cut(s) | 1017 |
| SaqAI | TTAA | 5 cut(s) | 158, 756, 845, 882, 936 |
| SatI | GCNGC | 4 cut(s) | 83, 988, 1034, 1061 |
| Sau3AI | GATC | 2 cut(s) | 234, 427 |
| Sau96I | GGNCC | 1 cut(s) | 151 |
| SchI | GAGTC | 1 cut(s) | 118 |
| ScrFI | CCNGG | 1 cut(s) | 648 |
| SfaNI | GCATC | 2 cut(s) | 359, 775 |
| SfcI | CTRYAG | 2 cut(s) | 354, 585 |
| SinI | GGWCC | 1 cut(s) | 151 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 215 |
| SmlI | CTYRAG | 1 cut(s) | 86 |
| SmoI | CTYRAG | 1 cut(s) | 86 |
| Sse9I | AATT | 8 cut(s) | 114, 155, 345, 437, 652, 719, 753, 1076 |
| SsiI | CCGC | 4 cut(s) | 72, 981, 987, 1038 |
| SspMI | CTAG | 2 cut(s) | 821, 918 |
| StyD4I | CCNGG | 1 cut(s) | 646 |
| StyI | CCWWGG | 1 cut(s) | 923 |
| TaaI | ACNGT | 2 cut(s) | 343, 586 |
| TaiI | ACGT | 4 cut(s) | 229, 267, 426, 528 |
| TaqI | TCGA | 3 cut(s) | 267, 426, 1085 |
| TasI | AATT | 8 cut(s) | 114, 155, 345, 437, 652, 719, 753, 1076 |
| TatI | WGTACW | 1 cut(s) | 301 |
| TauI | GCSGC | 1 cut(s) | 990 |
| TfiI | GAWTC | 3 cut(s) | 44, 459, 857 |
| Tru1I | TTAA | 5 cut(s) | 158, 756, 845, 882, 936 |
| Tru9I | TTAA | 5 cut(s) | 158, 756, 845, 882, 936 |
| TscAI | CASTG | 1 cut(s) | 1062 |
| TseI | GCWGC | 3 cut(s) | 82, 1033, 1060 |
| TspDTI | ATGAA | 5 cut(s) | 136, 199, 431, 451, 478 |
| TspGWI | ACGGA | 1 cut(s) | 122 |
| TspRI | CASTG | 1 cut(s) | 1062 |
| VpaK11BI | GGWCC | 1 cut(s) | 151 |
| VspI | ATTAAT | 1 cut(s) | 756 |
| XapI | RAATTY | 4 cut(s) | 114, 437, 719, 1076 |
| XmnI | GAANNNNTTC | 2 cut(s) | 374, 913 |
| XspI | CTAG | 2 cut(s) | 821, 918 |
| ZraI | GACGTC | 2 cut(s) | 265, 424 |