source UniProtKB
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peptidase_C48 | PF02902 | 76 - 198 | 4.1e-09 | Ulp1 protease family, C-terminal catalytic domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 99 |
| AccI | GTMKAC | 1 cut(s) | 108 |
| AccIII | TCCGGA | 1 cut(s) | 274 |
| AclWI | GGATC | 4 cut(s) | 13, 266, 296, 309 |
| AcsI | RAATTY | 2 cut(s) | 397, 415 |
| AfaI | GTAC | 1 cut(s) | 461 |
| AjnI | CCWGG | 1 cut(s) | 211 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 29 |
| AlwI | GGATC | 4 cut(s) | 13, 266, 296, 309 |
| Aor13HI | TCCGGA | 1 cut(s) | 274 |
| AoxI | GGCC | 2 cut(s) | 174, 391 |
| ApaI | GGGCCC | 1 cut(s) | 178 |
| ApeKI | GCWGC | 1 cut(s) | 543 |
| ApoI | RAATTY | 2 cut(s) | 397, 415 |
| AspS9I | GGNCC | 3 cut(s) | 174, 175, 277 |
| AsuHPI | GGTGA | 1 cut(s) | 257 |
| AvaII | GGWCC | 1 cut(s) | 277 |
| BaeGI | GKGCMC | 1 cut(s) | 178 |
| BamHI | GGATCC | 1 cut(s) | 301 |
| BanII | GRGCYC | 1 cut(s) | 178 |
| BbvI | GCAGC | 1 cut(s) | 555 |
| BciT130I | CCWGG | 1 cut(s) | 213 |
| BclI | TGATCA | 2 cut(s) | 247, 568 |
| BfaI | CTAG | 2 cut(s) | 359, 441 |
| BfmI | CTRYAG | 1 cut(s) | 342 |
| BisI | GCNGC | 1 cut(s) | 544 |
| BlsI | GCNGC | 1 cut(s) | 545 |
| Bme1390I | CCNGG | 1 cut(s) | 213 |
| Bme18I | GGWCC | 1 cut(s) | 277 |
| BmgT120I | GGNCC | 3 cut(s) | 174, 175, 277 |
| BmiI | GGNNCC | 2 cut(s) | 176, 303 |
| BmrFI | CCNGG | 1 cut(s) | 213 |
| BmsI | GCATC | 1 cut(s) | 564 |
| BpmI | CTGGAG | 1 cut(s) | 348 |
| BsaWI | WCCGGW | 1 cut(s) | 274 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 443, 473 |
| Bse1I | ACTGG | 1 cut(s) | 331 |
| BseAI | TCCGGA | 1 cut(s) | 274 |
| BseBI | CCWGG | 1 cut(s) | 213 |
| BseGI | GGATG | 2 cut(s) | 261, 342 |
| BseNI | ACTGG | 1 cut(s) | 331 |
| BseRI | GAGGAG | 1 cut(s) | 547 |
| BseSI | GKGCMC | 1 cut(s) | 178 |
| BseXI | GCAGC | 1 cut(s) | 555 |
| BsgI | GTGCAG | 1 cut(s) | 339 |
| BshFI | GGCC | 2 cut(s) | 176, 393 |
| BsiSI | CCGG | 2 cut(s) | 275, 394 |
| BsmI | GAATGC | 2 cut(s) | 119, 426 |
| BsnI | GGCC | 2 cut(s) | 176, 393 |
| Bsp120I | GGGCCC | 1 cut(s) | 174 |
| Bsp1286I | GDGCHC | 1 cut(s) | 178 |
| Bsp13I | TCCGGA | 1 cut(s) | 274 |
| Bsp143I | GATC | 5 cut(s) | 5, 247, 271, 301, 568 |
| BspANI | GGCC | 2 cut(s) | 176, 393 |
| BspEI | TCCGGA | 1 cut(s) | 274 |
| BspLI | GGNNCC | 2 cut(s) | 176, 303 |
| BspPI | GGATC | 4 cut(s) | 13, 266, 296, 309 |
| BsrI | ACTGG | 1 cut(s) | 331 |
| BssMI | GATC | 5 cut(s) | 5, 247, 271, 301, 568 |
| Bst2UI | CCWGG | 1 cut(s) | 213 |
| Bst4CI | ACNGT | 1 cut(s) | 169 |
| Bst6I | CTCTTC | 1 cut(s) | 377 |
| BstC8I | GCNNGC | 2 cut(s) | 28, 424 |
| BstF5I | GGATG | 2 cut(s) | 261, 342 |
| BstKTI | GATC | 5 cut(s) | 8, 250, 274, 304, 571 |
| BstMBI | GATC | 5 cut(s) | 5, 247, 271, 301, 568 |
| BstNI | CCWGG | 1 cut(s) | 213 |
| BstSCI | CCNGG | 1 cut(s) | 211 |
| BstSFI | CTRYAG | 1 cut(s) | 342 |
| BstSLI | GKGCMC | 1 cut(s) | 178 |
| BstV1I | GCAGC | 1 cut(s) | 555 |
| BstX2I | RGATCY | 1 cut(s) | 301 |
| BstYI | RGATCY | 1 cut(s) | 301 |
| BsuRI | GGCC | 2 cut(s) | 176, 393 |
| BtsCI | GGATG | 2 cut(s) | 261, 342 |
| BtsI | GCAGTG | 1 cut(s) | 285 |
| BtsIMutI | CAGTG | 2 cut(s) | 285, 324 |
| Cac8I | GCNNGC | 2 cut(s) | 28, 424 |
| Cfr13I | GGNCC | 3 cut(s) | 174, 175, 277 |
| CseI | GACGC | 1 cut(s) | 324 |
| Csp6I | GTAC | 1 cut(s) | 460 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 436, 471, 579, 614 |
| CviAII | CATG | 5 cut(s) | 31, 112, 226, 469, 478 |
| CviJI | RGCY | 5 cut(s) | 176, 196, 393, 422, 546 |
| CviKI_1 | RGCY | 5 cut(s) | 176, 196, 393, 422, 546 |
| CviQI | GTAC | 1 cut(s) | 460 |
| DpnI | GATC | 5 cut(s) | 7, 249, 273, 303, 570 |
| DpnII | GATC | 5 cut(s) | 5, 247, 271, 301, 568 |
| Eam1104I | CTCTTC | 1 cut(s) | 377 |
| EarI | CTCTTC | 1 cut(s) | 377 |
| Eco24I | GRGCYC | 1 cut(s) | 178 |
| Eco47I | GGWCC | 1 cut(s) | 277 |
| EcoO109I | RGGNCCY | 1 cut(s) | 174 |
| EcoRI | GAATTC | 1 cut(s) | 397 |
| EcoRII | CCWGG | 1 cut(s) | 211 |
| EcoT38I | GRGCYC | 1 cut(s) | 178 |
| FaeI | CATG | 5 cut(s) | 34, 115, 229, 472, 481 |
| FatI | CATG | 5 cut(s) | 30, 111, 225, 468, 477 |
| FbaI | TGATCA | 2 cut(s) | 247, 568 |
| FblI | GTMKAC | 1 cut(s) | 108 |
| Fnu4HI | GCNGC | 1 cut(s) | 544 |
| FokI | GGATG | 2 cut(s) | 268, 349 |
| FriOI | GRGCYC | 1 cut(s) | 178 |
| Fsp4HI | GCNGC | 1 cut(s) | 544 |
| FspBI | CTAG | 2 cut(s) | 359, 441 |
| GluI | GCNGC | 1 cut(s) | 544 |
| GsuI | CTGGAG | 1 cut(s) | 348 |
| HaeIII | GGCC | 2 cut(s) | 176, 393 |
| HapII | CCGG | 2 cut(s) | 275, 394 |
| HgaI | GACGC | 1 cut(s) | 324 |
| Hin1II | CATG | 5 cut(s) | 34, 115, 229, 472, 481 |
| HincII | GTYRAC | 1 cut(s) | 261 |
| HindII | GTYRAC | 1 cut(s) | 261 |
| HpaII | CCGG | 2 cut(s) | 275, 394 |
| HphI | GGTGA | 1 cut(s) | 257 |
| Hpy166II | GTNNAC | 2 cut(s) | 109, 261 |
| Hpy188I | TCNGA | 4 cut(s) | 10, 309, 376, 573 |
| Hpy188III | TCNNGA | 1 cut(s) | 275 |
| Hpy8I | GTNNAC | 2 cut(s) | 109, 261 |
| HpyAV | CCTTC | 1 cut(s) | 141 |
| HpyCH4III | ACNGT | 1 cut(s) | 169 |
| HpyCH4V | TGCA | 6 cut(s) | 26, 54, 119, 146, 206, 356 |
| Hsp92II | CATG | 5 cut(s) | 34, 115, 229, 472, 481 |
| Kpn2I | TCCGGA | 1 cut(s) | 274 |
| Ksp22I | TGATCA | 2 cut(s) | 247, 568 |
| Kzo9I | GATC | 5 cut(s) | 5, 247, 271, 301, 568 |
| LpnPI | CCDG | 9 cut(s) | 141, 198, 225, 288, 312, 407, 408, 518, 531 |
| Lsp1109I | GCAGC | 1 cut(s) | 555 |
| LweI | GCATC | 1 cut(s) | 564 |
| MaeI | CTAG | 2 cut(s) | 359, 441 |
| MaeIII | GTNAC | 1 cut(s) | 199 |
| MalI | GATC | 5 cut(s) | 7, 249, 273, 303, 570 |
| MboI | GATC | 5 cut(s) | 5, 247, 271, 301, 568 |
| MboII | GAAGA | 1 cut(s) | 394 |
| MfeI | CAATTG | 1 cut(s) | 264 |
| MflI | RGATCY | 1 cut(s) | 301 |
| MhlI | GDGCHC | 1 cut(s) | 178 |
| MluCI | AATT | 6 cut(s) | 138, 238, 264, 370, 397, 415 |
| MnlI | CCTC | 7 cut(s) | 27, 315, 378, 441, 474, 487, 525 |
| MroI | TCCGGA | 1 cut(s) | 274 |
| MslI | CAYNNNNRTG | 1 cut(s) | 59 |
| MspI | CCGG | 2 cut(s) | 275, 394 |
| MspR9I | CCNGG | 1 cut(s) | 213 |
| MunI | CAATTG | 1 cut(s) | 264 |
| Mva1269I | GAATGC | 2 cut(s) | 119, 426 |
| MvaI | CCWGG | 1 cut(s) | 213 |
| NdeII | GATC | 5 cut(s) | 5, 247, 271, 301, 568 |
| NlaIII | CATG | 5 cut(s) | 34, 115, 229, 472, 481 |
| NlaIV | GGNNCC | 2 cut(s) | 176, 303 |
| PctI | GAATGC | 2 cut(s) | 119, 426 |
| PkrI | GCNGC | 1 cut(s) | 545 |
| PsiI | TTATAA | 1 cut(s) | 99 |
| Psp6I | CCWGG | 1 cut(s) | 211 |
| PspGI | CCWGG | 1 cut(s) | 211 |
| PspN4I | GGNNCC | 2 cut(s) | 176, 303 |
| PspOMI | GGGCCC | 1 cut(s) | 174 |
| PspPI | GGNCC | 3 cut(s) | 174, 175, 277 |
| PsuI | RGATCY | 1 cut(s) | 301 |
| RsaI | GTAC | 1 cut(s) | 461 |
| RsaNI | GTAC | 1 cut(s) | 460 |
| RseI | CAYNNNNRTG | 1 cut(s) | 59 |
| SatI | GCNGC | 1 cut(s) | 544 |
| Sau3AI | GATC | 5 cut(s) | 5, 247, 271, 301, 568 |
| Sau96I | GGNCC | 3 cut(s) | 174, 175, 277 |
| ScrFI | CCNGG | 1 cut(s) | 213 |
| SduI | GDGCHC | 1 cut(s) | 178 |
| SetI | ASST | 4 cut(s) | 74, 364, 442, 507 |
| SfaNI | GCATC | 1 cut(s) | 564 |
| SfcI | CTRYAG | 1 cut(s) | 342 |
| SinI | GGWCC | 1 cut(s) | 277 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 59 |
| Sse9I | AATT | 6 cut(s) | 138, 238, 264, 370, 397, 415 |
| SspMI | CTAG | 2 cut(s) | 359, 441 |
| StyD4I | CCNGG | 1 cut(s) | 211 |
| TaaI | ACNGT | 1 cut(s) | 169 |
| TasI | AATT | 6 cut(s) | 138, 238, 264, 370, 397, 415 |
| TscAI | CASTG | 2 cut(s) | 292, 331 |
| TseI | GCWGC | 1 cut(s) | 543 |
| TspDTI | ATGAA | 2 cut(s) | 112, 214 |
| TspRI | CASTG | 2 cut(s) | 292, 331 |
| VpaK11BI | GGWCC | 1 cut(s) | 277 |
| XapI | RAATTY | 2 cut(s) | 397, 415 |
| XmiI | GTMKAC | 1 cut(s) | 108 |
| XspI | CTAG | 2 cut(s) | 359, 441 |