source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1182 |
| Acc36I | ACCTGC | 1 cut(s) | 825 |
| AccI | GTMKAC | 1 cut(s) | 607 |
| AclWI | GGATC | 3 cut(s) | 124, 137, 220 |
| AcoI | YGGCCR | 2 cut(s) | 922, 1159 |
| AcsI | RAATTY | 4 cut(s) | 202, 566, 626, 697 |
| AcuI | CTGAAG | 1 cut(s) | 396 |
| AfaI | GTAC | 1 cut(s) | 124 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 108, 261, 1027 |
| AgsI | TTSAA | 6 cut(s) | 15, 496, 521, 737, 812, 1036 |
| AjnI | CCWGG | 2 cut(s) | 1156, 1161 |
| AleI | CACNNNNGTG | 2 cut(s) | 1086, 1096 |
| Alw21I | GWGCWC | 2 cut(s) | 1093, 1123 |
| Alw26I | GTCTC | 2 cut(s) | 521, 771 |
| Alw44I | GTGCAC | 1 cut(s) | 1089 |
| AlwI | GGATC | 3 cut(s) | 124, 137, 220 |
| Ama87I | CYCGRG | 1 cut(s) | 248 |
| AoxI | GGCC | 4 cut(s) | 252, 861, 922, 1159 |
| ApaLI | GTGCAC | 1 cut(s) | 1089 |
| ApeKI | GCWGC | 5 cut(s) | 83, 296, 455, 503, 561 |
| ApoI | RAATTY | 4 cut(s) | 202, 566, 626, 697 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 639 |
| AspS9I | GGNCC | 1 cut(s) | 861 |
| AsuHPI | GGTGA | 2 cut(s) | 364, 880 |
| AsuNHI | GCTAGC | 1 cut(s) | 688 |
| AvaI | CYCGRG | 1 cut(s) | 248 |
| BaeGI | GKGCMC | 1 cut(s) | 1093 |
| BalI | TGGCCA | 1 cut(s) | 1161 |
| BamHI | GGATCC | 1 cut(s) | 129 |
| BanII | GRGCYC | 1 cut(s) | 1123 |
| BbsI | GAAGAC | 2 cut(s) | 345, 626 |
| Bbv12I | GWGCWC | 2 cut(s) | 1093, 1123 |
| BbvI | GCAGC | 5 cut(s) | 95, 283, 442, 490, 573 |
| BccI | CCATC | 5 cut(s) | 421, 737, 875, 899, 933 |
| BceAI | ACGGC | 2 cut(s) | 523, 1009 |
| BciT130I | CCWGG | 2 cut(s) | 1158, 1163 |
| BclI | TGATCA | 2 cut(s) | 796, 1078 |
| BcoDI | GTCTC | 2 cut(s) | 521, 771 |
| BfaI | CTAG | 3 cut(s) | 689, 1130, 1172 |
| BfuAI | ACCTGC | 1 cut(s) | 825 |
| BglII | AGATCT | 1 cut(s) | 913 |
| BisI | GCNGC | 5 cut(s) | 84, 297, 456, 504, 562 |
| BlsI | GCNGC | 5 cut(s) | 85, 298, 457, 505, 563 |
| Bme1390I | CCNGG | 2 cut(s) | 1158, 1163 |
| BmeT110I | CYCGRG | 1 cut(s) | 248 |
| BmgT120I | GGNCC | 1 cut(s) | 861 |
| BmiI | GGNNCC | 3 cut(s) | 69, 131, 727 |
| BmrFI | CCNGG | 2 cut(s) | 1158, 1163 |
| BmsI | GCATC | 2 cut(s) | 84, 581 |
| BmtI | GCTAGC | 1 cut(s) | 692 |
| BpiI | GAAGAC | 2 cut(s) | 345, 626 |
| BpmI | CTGGAG | 1 cut(s) | 443 |
| BpuEI | CTTGAG | 2 cut(s) | 45, 367 |
| BsaAI | YACGTR | 1 cut(s) | 122 |
| BsaBI | GATNNNNATC | 1 cut(s) | 795 |
| BsaJI | CCNNGG | 2 cut(s) | 249, 444 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 108, 261, 1027 |
| Bse118I | RCCGGY | 1 cut(s) | 292 |
| Bse1I | ACTGG | 2 cut(s) | 262, 1090 |
| Bse3DI | GCAATG | 2 cut(s) | 393, 438 |
| Bse8I | GATNNNNATC | 1 cut(s) | 795 |
| BseBI | CCWGG | 2 cut(s) | 1158, 1163 |
| BseDI | CCNNGG | 2 cut(s) | 249, 444 |
| BseGI | GGATG | 6 cut(s) | 520, 592, 886, 891, 925, 961 |
| BseJI | GATNNNNATC | 1 cut(s) | 795 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 108, 261, 1027 |
| BseMI | GCAATG | 2 cut(s) | 393, 438 |
| BseMII | CTCAG | 1 cut(s) | 665 |
| BseNI | ACTGG | 2 cut(s) | 262, 1090 |
| BseRI | GAGGAG | 2 cut(s) | 171, 539 |
| BseSI | GKGCMC | 1 cut(s) | 1093 |
| BseXI | GCAGC | 5 cut(s) | 95, 283, 442, 490, 573 |
| BsgI | GTGCAG | 1 cut(s) | 489 |
| BshFI | GGCC | 4 cut(s) | 254, 863, 924, 1161 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1093, 1123 |
| BsiHKCI | CYCGRG | 1 cut(s) | 248 |
| BsiSI | CCGG | 1 cut(s) | 293 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 108, 261, 1027 |
| BsmAI | GTCTC | 2 cut(s) | 521, 771 |
| BsnI | GGCC | 4 cut(s) | 254, 863, 924, 1161 |
| BsoBI | CYCGRG | 1 cut(s) | 248 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1093, 1123 |
| Bsp143I | GATC | 6 cut(s) | 129, 212, 796, 913, 1059, 1078 |
| BspANI | GGCC | 4 cut(s) | 254, 863, 924, 1161 |
| BspCNI | CTCAG | 1 cut(s) | 664 |
| BspHI | TCATGA | 2 cut(s) | 615, 799 |
| BspLI | GGNNCC | 3 cut(s) | 69, 131, 727 |
| BspMI | ACCTGC | 1 cut(s) | 825 |
| BspOI | GCTAGC | 1 cut(s) | 692 |
| BspPI | GGATC | 3 cut(s) | 124, 137, 220 |
| BsrDI | GCAATG | 2 cut(s) | 393, 438 |
| BsrFI | RCCGGY | 1 cut(s) | 292 |
| BsrI | ACTGG | 2 cut(s) | 262, 1090 |
| BssAI | RCCGGY | 1 cut(s) | 292 |
| BssECI | CCNNGG | 2 cut(s) | 249, 444 |
| BssMI | GATC | 6 cut(s) | 129, 212, 796, 913, 1059, 1078 |
| BssT1I | CCWWGG | 1 cut(s) | 444 |
| Bst2UI | CCWGG | 2 cut(s) | 1158, 1163 |
| Bst4CI | ACNGT | 1 cut(s) | 670 |
| Bst6I | CTCTTC | 4 cut(s) | 356, 372, 516, 761 |
| BstBAI | YACGTR | 1 cut(s) | 122 |
| BstC8I | GCNNGC | 3 cut(s) | 294, 690, 822 |
| BstDEI | CTNAG | 3 cut(s) | 651, 684, 1186 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1025 |
| BstF5I | GGATG | 6 cut(s) | 520, 592, 886, 891, 925, 961 |
| BstKTI | GATC | 6 cut(s) | 132, 215, 799, 916, 1062, 1081 |
| BstMAI | GTCTC | 2 cut(s) | 521, 771 |
| BstMBI | GATC | 6 cut(s) | 129, 212, 796, 913, 1059, 1078 |
| BstNI | CCWGG | 2 cut(s) | 1158, 1163 |
| BstSCI | CCNGG | 2 cut(s) | 1156, 1161 |
| BstSLI | GKGCMC | 1 cut(s) | 1093 |
| BstV1I | GCAGC | 5 cut(s) | 95, 283, 442, 490, 573 |
| BstV2I | GAAGAC | 2 cut(s) | 345, 626 |
| BstX2I | RGATCY | 2 cut(s) | 129, 913 |
| BstYI | RGATCY | 2 cut(s) | 129, 913 |
| BsuRI | GGCC | 4 cut(s) | 254, 863, 924, 1161 |
| BtsCI | GGATG | 6 cut(s) | 520, 592, 886, 891, 925, 961 |
| BtsIMutI | CAGTG | 2 cut(s) | 255, 1083 |
| BveI | ACCTGC | 1 cut(s) | 825 |
| Cac8I | GCNNGC | 3 cut(s) | 294, 690, 822 |
| CciI | TCATGA | 2 cut(s) | 615, 799 |
| Cfr10I | RCCGGY | 1 cut(s) | 292 |
| Cfr13I | GGNCC | 1 cut(s) | 861 |
| Csp6I | GTAC | 1 cut(s) | 123 |
| CviAII | CATG | 3 cut(s) | 616, 800, 967 |
| CviQI | GTAC | 1 cut(s) | 123 |
| DdeI | CTNAG | 3 cut(s) | 651, 684, 1186 |
| DpnI | GATC | 6 cut(s) | 131, 214, 798, 915, 1061, 1080 |
| DpnII | GATC | 6 cut(s) | 129, 212, 796, 913, 1059, 1078 |
| EaeI | YGGCCR | 2 cut(s) | 922, 1159 |
| Eam1104I | CTCTTC | 4 cut(s) | 356, 372, 516, 761 |
| EarI | CTCTTC | 4 cut(s) | 356, 372, 516, 761 |
| Ecl136II | GAGCTC | 1 cut(s) | 1121 |
| Eco130I | CCWWGG | 1 cut(s) | 444 |
| Eco24I | GRGCYC | 1 cut(s) | 1123 |
| Eco32I | GATATC | 1 cut(s) | 987 |
| Eco53kI | GAGCTC | 1 cut(s) | 1121 |
| Eco57I | CTGAAG | 1 cut(s) | 396 |
| Eco88I | CYCGRG | 1 cut(s) | 248 |
| EcoICRI | GAGCTC | 1 cut(s) | 1121 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1025 |
| EcoRI | GAATTC | 1 cut(s) | 202 |
| EcoRII | CCWGG | 2 cut(s) | 1156, 1161 |
| EcoRV | GATATC | 1 cut(s) | 987 |
| EcoT14I | CCWWGG | 1 cut(s) | 444 |
| EcoT38I | GRGCYC | 1 cut(s) | 1123 |
| ErhI | CCWWGG | 1 cut(s) | 444 |
| FaeI | CATG | 3 cut(s) | 619, 803, 970 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 442, 474, 476, 508 |
| FatI | CATG | 3 cut(s) | 615, 799, 966 |
| FbaI | TGATCA | 2 cut(s) | 796, 1078 |
| FblI | GTMKAC | 1 cut(s) | 607 |
| Fnu4HI | GCNGC | 5 cut(s) | 84, 297, 456, 504, 562 |
| FokI | GGATG | 6 cut(s) | 527, 599, 878, 893, 912, 968 |
| FriOI | GRGCYC | 1 cut(s) | 1123 |
| Fsp4HI | GCNGC | 5 cut(s) | 84, 297, 456, 504, 562 |
| FspBI | CTAG | 3 cut(s) | 689, 1130, 1172 |
| GluI | GCNGC | 5 cut(s) | 84, 297, 456, 504, 562 |
| GsuI | CTGGAG | 1 cut(s) | 443 |
| HaeIII | GGCC | 4 cut(s) | 254, 863, 924, 1161 |
| HapII | CCGG | 1 cut(s) | 293 |
| Hin1II | CATG | 3 cut(s) | 619, 803, 970 |
| HinfI | GANTC | 3 cut(s) | 4, 329, 680 |
| HpaII | CCGG | 1 cut(s) | 293 |
| HphI | GGTGA | 2 cut(s) | 364, 880 |
| Hpy166II | GTNNAC | 3 cut(s) | 608, 888, 1091 |
| Hpy188I | TCNGA | 2 cut(s) | 217, 645 |
| Hpy188III | TCNNGA | 6 cut(s) | 210, 478, 493, 545, 616, 800 |
| Hpy8I | GTNNAC | 3 cut(s) | 608, 888, 1091 |
| HpyAV | CCTTC | 5 cut(s) | 734, 818, 928, 973, 1075 |
| HpyCH4III | ACNGT | 1 cut(s) | 670 |
| HpyCH4IV | ACGT | 1 cut(s) | 121 |
| HpyCH4V | TGCA | 4 cut(s) | 97, 506, 572, 1091 |
| HpyF3I | CTNAG | 3 cut(s) | 651, 684, 1186 |
| HpySE526I | ACGT | 1 cut(s) | 121 |
| Hsp92II | CATG | 3 cut(s) | 619, 803, 970 |
| KroI | GCCGGC | 1 cut(s) | 292 |
| KroNI | GCCGGC | 1 cut(s) | 294 |
| Ksp22I | TGATCA | 2 cut(s) | 796, 1078 |
| Kzo9I | GATC | 6 cut(s) | 129, 212, 796, 913, 1059, 1078 |
| LmnI | GCTCC | 1 cut(s) | 418 |
| Lsp1109I | GCAGC | 5 cut(s) | 95, 283, 442, 490, 573 |
| LweI | GCATC | 2 cut(s) | 84, 581 |
| MaeI | CTAG | 3 cut(s) | 689, 1130, 1172 |
| MaeII | ACGT | 1 cut(s) | 121 |
| MalI | GATC | 6 cut(s) | 131, 214, 798, 915, 1061, 1080 |
| MboI | GATC | 6 cut(s) | 129, 212, 796, 913, 1059, 1078 |
| MfeI | CAATTG | 1 cut(s) | 72 |
| MflI | RGATCY | 2 cut(s) | 129, 913 |
| MhlI | GDGCHC | 2 cut(s) | 1093, 1123 |
| MlsI | TGGCCA | 1 cut(s) | 1161 |
| MluCI | AATT | 8 cut(s) | 72, 164, 202, 554, 566, 626, 697, 756 |
| MluNI | TGGCCA | 1 cut(s) | 1161 |
| MlyI | GAGTC | 1 cut(s) | 689 |
| MmeI | TCCRAC | 3 cut(s) | 657, 1032, 1133 |
| Mox20I | TGGCCA | 1 cut(s) | 1161 |
| MroNI | GCCGGC | 1 cut(s) | 292 |
| MroXI | GAANNNNTTC | 1 cut(s) | 639 |
| MscI | TGGCCA | 1 cut(s) | 1161 |
| MseI | TTAA | 3 cut(s) | 306, 488, 875 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1086, 1096 |
| Msp20I | TGGCCA | 1 cut(s) | 1161 |
| MspI | CCGG | 1 cut(s) | 293 |
| MspR9I | CCNGG | 2 cut(s) | 1158, 1163 |
| MunI | CAATTG | 1 cut(s) | 72 |
| MvaI | CCWGG | 2 cut(s) | 1158, 1163 |
| NaeI | GCCGGC | 1 cut(s) | 294 |
| NdeII | GATC | 6 cut(s) | 129, 212, 796, 913, 1059, 1078 |
| NgoMIV | GCCGGC | 1 cut(s) | 292 |
| NheI | GCTAGC | 1 cut(s) | 688 |
| NlaIII | CATG | 3 cut(s) | 619, 803, 970 |
| NlaIV | GGNNCC | 3 cut(s) | 69, 131, 727 |
| OliI | CACNNNNGTG | 2 cut(s) | 1086, 1096 |
| PagI | TCATGA | 2 cut(s) | 615, 799 |
| PdiI | GCCGGC | 1 cut(s) | 294 |
| PdmI | GAANNNNTTC | 1 cut(s) | 639 |
| PfeI | GAWTC | 2 cut(s) | 4, 329 |
| PkrI | GCNGC | 5 cut(s) | 85, 298, 457, 505, 563 |
| PleI | GAGTC | 1 cut(s) | 688 |
| PpsI | GAGTC | 1 cut(s) | 688 |
| Ppu21I | YACGTR | 1 cut(s) | 122 |
| PsiI | TTATAA | 1 cut(s) | 1182 |
| Psp124BI | GAGCTC | 1 cut(s) | 1123 |
| Psp6I | CCWGG | 2 cut(s) | 1156, 1161 |
| PspGI | CCWGG | 2 cut(s) | 1156, 1161 |
| PspN4I | GGNNCC | 3 cut(s) | 69, 131, 727 |
| PspPI | GGNCC | 1 cut(s) | 861 |
| PsuI | RGATCY | 2 cut(s) | 129, 913 |
| RsaI | GTAC | 1 cut(s) | 124 |
| RsaNI | GTAC | 1 cut(s) | 123 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1086, 1096 |
| SacI | GAGCTC | 1 cut(s) | 1123 |
| SaqAI | TTAA | 3 cut(s) | 306, 488, 875 |
| SatI | GCNGC | 5 cut(s) | 84, 297, 456, 504, 562 |
| Sau3AI | GATC | 6 cut(s) | 129, 212, 796, 913, 1059, 1078 |
| Sau96I | GGNCC | 1 cut(s) | 861 |
| SchI | GAGTC | 1 cut(s) | 689 |
| ScrFI | CCNGG | 2 cut(s) | 1158, 1163 |
| SduI | GDGCHC | 2 cut(s) | 1093, 1123 |
| SfaNI | GCATC | 2 cut(s) | 84, 581 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1086, 1096 |
| SmlI | CTYRAG | 2 cut(s) | 60, 346 |
| SmoI | CTYRAG | 2 cut(s) | 60, 346 |
| Sse9I | AATT | 8 cut(s) | 72, 164, 202, 554, 566, 626, 697, 756 |
| SspMI | CTAG | 3 cut(s) | 689, 1130, 1172 |
| SstI | GAGCTC | 1 cut(s) | 1123 |
| StyD4I | CCNGG | 2 cut(s) | 1156, 1161 |
| StyI | CCWWGG | 1 cut(s) | 444 |
| TaaI | ACNGT | 1 cut(s) | 670 |
| TaiI | ACGT | 1 cut(s) | 124 |
| TaqI | TCGA | 1 cut(s) | 989 |
| TasI | AATT | 8 cut(s) | 72, 164, 202, 554, 566, 626, 697, 756 |
| TfiI | GAWTC | 2 cut(s) | 4, 329 |
| Tru1I | TTAA | 3 cut(s) | 306, 488, 875 |
| Tru9I | TTAA | 3 cut(s) | 306, 488, 875 |
| TscAI | CASTG | 2 cut(s) | 262, 1090 |
| TseI | GCWGC | 5 cut(s) | 83, 296, 455, 503, 561 |
| TspDTI | ATGAA | 6 cut(s) | 17, 417, 632, 690, 992, 1057 |
| TspRI | CASTG | 2 cut(s) | 262, 1090 |
| VneI | GTGCAC | 1 cut(s) | 1089 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1025 |
| XapI | RAATTY | 4 cut(s) | 202, 566, 626, 697 |
| XmiI | GTMKAC | 1 cut(s) | 607 |
| XmnI | GAANNNNTTC | 1 cut(s) | 639 |
| XspI | CTAG | 3 cut(s) | 689, 1130, 1172 |