source UniProtKB
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transposase_24 | PF03004 | 72 - 149 | 1.2e-06 | Plant transposase (Ptta/En/Spm family) |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 255 |
| AccII | CGCG | 4 cut(s) | 147, 220, 289, 302 |
| AciI | CCGC | 3 cut(s) | 147, 218, 302 |
| AcuI | CTGAAG | 1 cut(s) | 219 |
| AcyI | GRCGYC | 2 cut(s) | 256, 376 |
| AfaI | GTAC | 1 cut(s) | 187 |
| AgsI | TTSAA | 3 cut(s) | 12, 45, 78 |
| AluBI | AGCT | 4 cut(s) | 203, 319, 469, 506 |
| AluI | AGCT | 4 cut(s) | 203, 319, 469, 506 |
| Alw21I | GWGCWC | 1 cut(s) | 524 |
| Alw26I | GTCTC | 1 cut(s) | 431 |
| ApeKI | GCWGC | 2 cut(s) | 119, 203 |
| ArsI | GACNNNNNNTTYG | 3 cut(s) | 37, 490, 522 |
| AspLEI | GCGC | 2 cut(s) | 147, 258 |
| AsuHPI | GGTGA | 4 cut(s) | 18, 207, 269, 476 |
| BanI | GGYRCC | 1 cut(s) | 255 |
| BbsI | GAAGAC | 3 cut(s) | 44, 66, 167 |
| Bbv12I | GWGCWC | 1 cut(s) | 524 |
| BbvI | GCAGC | 2 cut(s) | 106, 190 |
| BceAI | ACGGC | 1 cut(s) | 243 |
| BciVI | GTATCC | 1 cut(s) | 290 |
| BclI | TGATCA | 1 cut(s) | 274 |
| BcoDI | GTCTC | 1 cut(s) | 431 |
| BfoI | RGCGCY | 1 cut(s) | 259 |
| BfuI | GTATCC | 1 cut(s) | 290 |
| BisI | GCNGC | 2 cut(s) | 120, 204 |
| BlsI | GCNGC | 2 cut(s) | 121, 205 |
| BmiI | GGNNCC | 1 cut(s) | 257 |
| BpiI | GAAGAC | 3 cut(s) | 44, 66, 167 |
| BpuEI | CTTGAG | 1 cut(s) | 192 |
| Bsa29I | ATCGAT | 1 cut(s) | 348 |
| BsaHI | GRCGYC | 2 cut(s) | 256, 376 |
| BsaJI | CCNNGG | 1 cut(s) | 84 |
| BseCI | ATCGAT | 1 cut(s) | 348 |
| BseDI | CCNNGG | 1 cut(s) | 84 |
| BseGI | GGATG | 2 cut(s) | 181, 188 |
| BseRI | GAGGAG | 1 cut(s) | 185 |
| BseXI | GCAGC | 2 cut(s) | 106, 190 |
| Bsh1236I | CGCG | 4 cut(s) | 147, 220, 289, 302 |
| BshNI | GGYRCC | 1 cut(s) | 255 |
| BshVI | ATCGAT | 1 cut(s) | 348 |
| BsiHKAI | GWGCWC | 1 cut(s) | 524 |
| BsiSI | CCGG | 1 cut(s) | 335 |
| BslFI | GGGAC | 1 cut(s) | 526 |
| BsmAI | GTCTC | 1 cut(s) | 431 |
| BsmFI | GGGAC | 1 cut(s) | 526 |
| BsmI | GAATGC | 1 cut(s) | 7 |
| Bsp1286I | GDGCHC | 1 cut(s) | 524 |
| Bsp143I | GATC | 1 cut(s) | 274 |
| BspACI | CCGC | 3 cut(s) | 147, 218, 302 |
| BspDI | ATCGAT | 1 cut(s) | 348 |
| BspFNI | CGCG | 4 cut(s) | 147, 220, 289, 302 |
| BspLI | GGNNCC | 1 cut(s) | 257 |
| BspQI | GCTCTTC | 1 cut(s) | 309 |
| BspT107I | GGYRCC | 1 cut(s) | 255 |
| BssECI | CCNNGG | 1 cut(s) | 84 |
| BssMI | GATC | 1 cut(s) | 274 |
| BssNI | GRCGYC | 2 cut(s) | 256, 376 |
| BssT1I | CCWWGG | 1 cut(s) | 84 |
| Bst4CI | ACNGT | 2 cut(s) | 464, 475 |
| Bst6I | CTCTTC | 2 cut(s) | 309, 525 |
| BstACI | GRCGYC | 2 cut(s) | 256, 376 |
| BstF5I | GGATG | 2 cut(s) | 181, 188 |
| BstFNI | CGCG | 4 cut(s) | 147, 220, 289, 302 |
| BstH2I | RGCGCY | 1 cut(s) | 259 |
| BstHHI | GCGC | 2 cut(s) | 147, 258 |
| BstKTI | GATC | 1 cut(s) | 277 |
| BstMAI | GTCTC | 1 cut(s) | 431 |
| BstMBI | GATC | 1 cut(s) | 274 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 203, 209 |
| BstUI | CGCG | 4 cut(s) | 147, 220, 289, 302 |
| BstV1I | GCAGC | 2 cut(s) | 106, 190 |
| BstV2I | GAAGAC | 3 cut(s) | 44, 66, 167 |
| Bsu15I | ATCGAT | 1 cut(s) | 348 |
| BsuI | GTATCC | 1 cut(s) | 290 |
| BsuTUI | ATCGAT | 1 cut(s) | 348 |
| BtsCI | GGATG | 2 cut(s) | 181, 188 |
| CfoI | GCGC | 2 cut(s) | 147, 258 |
| ClaI | ATCGAT | 1 cut(s) | 348 |
| CseI | GACGC | 3 cut(s) | 172, 201, 384 |
| Csp6I | GTAC | 1 cut(s) | 186 |
| CviAII | CATG | 2 cut(s) | 236, 404 |
| CviJI | RGCY | 7 cut(s) | 17, 197, 203, 319, 334, 469, 506 |
| CviKI_1 | RGCY | 7 cut(s) | 17, 197, 203, 319, 334, 469, 506 |
| CviQI | GTAC | 1 cut(s) | 186 |
| DinI | GGCGCC | 1 cut(s) | 257 |
| DpnI | GATC | 1 cut(s) | 276 |
| DpnII | GATC | 1 cut(s) | 274 |
| DraI | TTTAAA | 1 cut(s) | 400 |
| Eam1104I | CTCTTC | 2 cut(s) | 309, 525 |
| EarI | CTCTTC | 2 cut(s) | 309, 525 |
| Eco130I | CCWWGG | 1 cut(s) | 84 |
| Eco57I | CTGAAG | 1 cut(s) | 219 |
| EcoT14I | CCWWGG | 1 cut(s) | 84 |
| EgeI | GGCGCC | 1 cut(s) | 257 |
| EheI | GGCGCC | 1 cut(s) | 257 |
| ErhI | CCWWGG | 1 cut(s) | 84 |
| FaeI | CATG | 2 cut(s) | 239, 407 |
| FaiI | YATR | 7 cut(s) | 54, 237, 273, 282, 284, 405, 544 |
| FaqI | GGGAC | 1 cut(s) | 526 |
| FatI | CATG | 2 cut(s) | 235, 403 |
| FauI | CCCGC | 2 cut(s) | 140, 295 |
| FauNDI | CATATG | 1 cut(s) | 282 |
| FbaI | TGATCA | 1 cut(s) | 274 |
| Fnu4HI | GCNGC | 2 cut(s) | 120, 204 |
| FokI | GGATG | 2 cut(s) | 188, 195 |
| Fsp4HI | GCNGC | 2 cut(s) | 120, 204 |
| GlaI | GCGC | 2 cut(s) | 146, 257 |
| GluI | GCNGC | 2 cut(s) | 120, 204 |
| HaeII | RGCGCY | 1 cut(s) | 259 |
| HapII | CCGG | 1 cut(s) | 335 |
| HgaI | GACGC | 3 cut(s) | 172, 201, 384 |
| HhaI | GCGC | 2 cut(s) | 147, 258 |
| Hin1I | GRCGYC | 2 cut(s) | 256, 376 |
| Hin1II | CATG | 2 cut(s) | 239, 407 |
| Hin6I | GCGC | 2 cut(s) | 145, 256 |
| HinP1I | GCGC | 2 cut(s) | 145, 256 |
| HinfI | GANTC | 3 cut(s) | 95, 113, 514 |
| HpaII | CCGG | 1 cut(s) | 335 |
| HphI | GGTGA | 4 cut(s) | 18, 207, 269, 476 |
| Hpy188I | TCNGA | 1 cut(s) | 519 |
| HpyAV | CCTTC | 1 cut(s) | 334 |
| HpyCH4III | ACNGT | 2 cut(s) | 464, 475 |
| HpyCH4IV | ACGT | 1 cut(s) | 457 |
| HpyCH4V | TGCA | 2 cut(s) | 7, 122 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 203, 209 |
| HpySE526I | ACGT | 1 cut(s) | 457 |
| Hsp92I | GRCGYC | 2 cut(s) | 256, 376 |
| Hsp92II | CATG | 2 cut(s) | 239, 407 |
| HspAI | GCGC | 2 cut(s) | 145, 256 |
| KasI | GGCGCC | 1 cut(s) | 255 |
| Ksp22I | TGATCA | 1 cut(s) | 274 |
| Kzo9I | GATC | 1 cut(s) | 274 |
| LguI | GCTCTTC | 1 cut(s) | 309 |
| LmnI | GCTCC | 1 cut(s) | 519 |
| LpnPI | CCDG | 2 cut(s) | 152, 348 |
| Lsp1109I | GCAGC | 2 cut(s) | 106, 190 |
| MaeII | ACGT | 1 cut(s) | 457 |
| MaeIII | GTNAC | 4 cut(s) | 213, 221, 458, 485 |
| MalI | GATC | 1 cut(s) | 276 |
| MboI | GATC | 1 cut(s) | 274 |
| MboII | GAAGA | 8 cut(s) | 49, 66, 163, 166, 169, 172, 326, 542 |
| MhlI | GDGCHC | 1 cut(s) | 524 |
| MluCI | AATT | 2 cut(s) | 327, 432 |
| Mly113I | GGCGCC | 1 cut(s) | 256 |
| MlyI | GAGTC | 1 cut(s) | 508 |
| MnlI | CCTC | 6 cut(s) | 163, 166, 172, 186, 232, 532 |
| MseI | TTAA | 2 cut(s) | 399, 414 |
| MspI | CCGG | 1 cut(s) | 335 |
| Mva1269I | GAATGC | 1 cut(s) | 7 |
| MvnI | CGCG | 4 cut(s) | 147, 220, 289, 302 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 203, 209 |
| NarI | GGCGCC | 1 cut(s) | 256 |
| NdeI | CATATG | 1 cut(s) | 282 |
| NdeII | GATC | 1 cut(s) | 274 |
| NlaIII | CATG | 2 cut(s) | 239, 407 |
| NlaIV | GGNNCC | 1 cut(s) | 257 |
| NmuCI | GTSAC | 2 cut(s) | 213, 458 |
| PciSI | GCTCTTC | 1 cut(s) | 309 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 454 |
| PctI | GAATGC | 1 cut(s) | 7 |
| PfeI | GAWTC | 2 cut(s) | 95, 113 |
| PkrI | GCNGC | 2 cut(s) | 121, 205 |
| PleI | GAGTC | 1 cut(s) | 508 |
| PluTI | GGCGCC | 1 cut(s) | 259 |
| PpsI | GAGTC | 1 cut(s) | 508 |
| PspN4I | GGNNCC | 1 cut(s) | 257 |
| RsaI | GTAC | 1 cut(s) | 187 |
| RsaNI | GTAC | 1 cut(s) | 186 |
| SapI | GCTCTTC | 1 cut(s) | 309 |
| SaqAI | TTAA | 2 cut(s) | 399, 414 |
| SatI | GCNGC | 2 cut(s) | 120, 204 |
| Sau3AI | GATC | 1 cut(s) | 274 |
| SchI | GAGTC | 1 cut(s) | 508 |
| SduI | GDGCHC | 1 cut(s) | 524 |
| SetI | ASST | 5 cut(s) | 205, 321, 460, 471, 508 |
| SfoI | GGCGCC | 1 cut(s) | 257 |
| SmlI | CTYRAG | 1 cut(s) | 207 |
| SmoI | CTYRAG | 1 cut(s) | 207 |
| Sse9I | AATT | 2 cut(s) | 327, 432 |
| SsiI | CCGC | 3 cut(s) | 147, 218, 302 |
| SspDI | GGCGCC | 1 cut(s) | 255 |
| StyI | CCWWGG | 1 cut(s) | 84 |
| TaaI | ACNGT | 2 cut(s) | 464, 475 |
| TaiI | ACGT | 1 cut(s) | 460 |
| TaqI | TCGA | 2 cut(s) | 68, 348 |
| TasI | AATT | 2 cut(s) | 327, 432 |
| TatI | WGTACW | 1 cut(s) | 185 |
| TfiI | GAWTC | 2 cut(s) | 95, 113 |
| Tru1I | TTAA | 2 cut(s) | 399, 414 |
| Tru9I | TTAA | 2 cut(s) | 399, 414 |
| TseFI | GTSAC | 2 cut(s) | 213, 458 |
| TseI | GCWGC | 2 cut(s) | 119, 203 |
| Tsp45I | GTSAC | 2 cut(s) | 213, 458 |