source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 486 |
| AciI | CCGC | 1 cut(s) | 507 |
| AclWI | GGATC | 1 cut(s) | 487 |
| AcoI | YGGCCR | 1 cut(s) | 1010 |
| AcsI | RAATTY | 2 cut(s) | 374, 1138 |
| AfaI | GTAC | 3 cut(s) | 300, 777, 1077 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 194, 283 |
| AgsI | TTSAA | 7 cut(s) | 70, 115, 338, 562, 642, 915, 1180 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 510 |
| AhlI | ACTAGT | 1 cut(s) | 146 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 270, 302 |
| AleI | CACNNNNGTG | 1 cut(s) | 845 |
| AluBI | AGCT | 7 cut(s) | 273, 530, 593, 697, 833, 1021, 1127 |
| AluI | AGCT | 7 cut(s) | 273, 530, 593, 697, 833, 1021, 1127 |
| Alw26I | GTCTC | 2 cut(s) | 275, 543 |
| AlwI | GGATC | 1 cut(s) | 487 |
| AoxI | GGCC | 3 cut(s) | 795, 987, 1010 |
| ApeKI | GCWGC | 3 cut(s) | 349, 452, 1124 |
| ApoI | RAATTY | 2 cut(s) | 374, 1138 |
| AspLEI | GCGC | 2 cut(s) | 95, 487 |
| AsuHPI | GGTGA | 4 cut(s) | 974, 1026, 1178, 1189 |
| BaeGI | GKGCMC | 1 cut(s) | 185 |
| BbsI | GAAGAC | 1 cut(s) | 1089 |
| BbvI | GCAGC | 3 cut(s) | 361, 464, 1136 |
| BccI | CCATC | 3 cut(s) | 566, 653, 1178 |
| BclI | TGATCA | 2 cut(s) | 736, 820 |
| BcoDI | GTCTC | 2 cut(s) | 275, 543 |
| BcuI | ACTAGT | 1 cut(s) | 146 |
| BfaI | CTAG | 5 cut(s) | 129, 147, 441, 458, 890 |
| BisI | GCNGC | 3 cut(s) | 350, 453, 1125 |
| BlpI | GCTNAGC | 1 cut(s) | 698 |
| BlsI | GCNGC | 3 cut(s) | 351, 454, 1126 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 510 |
| BmiI | GGNNCC | 1 cut(s) | 64 |
| BmsI | GCATC | 2 cut(s) | 406, 446 |
| BpiI | GAAGAC | 1 cut(s) | 1089 |
| BpmI | CTGGAG | 1 cut(s) | 432 |
| Bpu10I | CCTNAGC | 1 cut(s) | 189 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 698 |
| BsaJI | CCNNGG | 3 cut(s) | 171, 475, 990 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 210, 240, 540, 570 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 194, 283 |
| Bse3DI | GCAATG | 1 cut(s) | 95 |
| BseDI | CCNNGG | 3 cut(s) | 171, 475, 990 |
| BseGI | GGATG | 4 cut(s) | 577, 629, 697, 1105 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 194, 283 |
| BseMI | GCAATG | 1 cut(s) | 95 |
| BseMII | CTCAG | 4 cut(s) | 180, 777, 1041, 1086 |
| BseRI | GAGGAG | 3 cut(s) | 23, 947, 1072 |
| BseSI | GKGCMC | 1 cut(s) | 185 |
| BseXI | GCAGC | 3 cut(s) | 361, 464, 1136 |
| BshFI | GGCC | 3 cut(s) | 797, 989, 1012 |
| BslFI | GGGAC | 2 cut(s) | 94, 765 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 194, 283 |
| BsmAI | GTCTC | 2 cut(s) | 275, 543 |
| BsmBI | CGTCTC | 2 cut(s) | 275, 543 |
| BsmFI | GGGAC | 2 cut(s) | 94, 765 |
| BsmI | GAATGC | 2 cut(s) | 943, 1175 |
| BsnI | GGCC | 3 cut(s) | 797, 989, 1012 |
| Bsp1286I | GDGCHC | 1 cut(s) | 185 |
| Bsp1407I | TGTACA | 1 cut(s) | 298 |
| Bsp143I | GATC | 5 cut(s) | 330, 479, 736, 820, 1087 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 698 |
| Bsp19I | CCATGG | 2 cut(s) | 475, 990 |
| BspACI | CCGC | 1 cut(s) | 507 |
| BspANI | GGCC | 3 cut(s) | 797, 989, 1012 |
| BspCNI | CTCAG | 4 cut(s) | 181, 778, 1042, 1087 |
| BspLI | GGNNCC | 1 cut(s) | 64 |
| BspPI | GGATC | 1 cut(s) | 487 |
| BsrDI | GCAATG | 1 cut(s) | 95 |
| BsrGI | TGTACA | 1 cut(s) | 298 |
| BssECI | CCNNGG | 3 cut(s) | 171, 475, 990 |
| BssMI | GATC | 5 cut(s) | 330, 479, 736, 820, 1087 |
| BssT1I | CCWWGG | 3 cut(s) | 171, 475, 990 |
| Bst4CI | ACNGT | 3 cut(s) | 286, 844, 979 |
| Bst6I | CTCTTC | 4 cut(s) | 309, 333, 360, 1049 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1155 |
| BstAUI | TGTACA | 1 cut(s) | 298 |
| BstC8I | GCNNGC | 2 cut(s) | 354, 987 |
| BstDEI | CTNAG | 7 cut(s) | 140, 189, 698, 786, 943, 1050, 1095 |
| BstDSI | CCRYGG | 2 cut(s) | 475, 990 |
| BstF5I | GGATG | 4 cut(s) | 577, 629, 697, 1105 |
| BstHHI | GCGC | 2 cut(s) | 95, 487 |
| BstKTI | GATC | 5 cut(s) | 333, 482, 739, 823, 1090 |
| BstMAI | GTCTC | 2 cut(s) | 275, 543 |
| BstMBI | GATC | 5 cut(s) | 330, 479, 736, 820, 1087 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 803, 1018, 1155 |
| BstNSI | RCATGY | 3 cut(s) | 513, 1153, 1162 |
| BstSLI | GKGCMC | 1 cut(s) | 185 |
| BstV1I | GCAGC | 3 cut(s) | 361, 464, 1136 |
| BstV2I | GAAGAC | 1 cut(s) | 1089 |
| BstX2I | RGATCY | 1 cut(s) | 479 |
| BstYI | RGATCY | 1 cut(s) | 479 |
| BsuRI | GGCC | 3 cut(s) | 797, 989, 1012 |
| BtgI | CCRYGG | 2 cut(s) | 475, 990 |
| BtsCI | GGATG | 4 cut(s) | 577, 629, 697, 1105 |
| BtsIMutI | CAGTG | 1 cut(s) | 840 |
| Cac8I | GCNNGC | 2 cut(s) | 354, 987 |
| CfoI | GCGC | 2 cut(s) | 95, 487 |
| Csp6I | GTAC | 3 cut(s) | 299, 776, 1076 |
| CviQI | GTAC | 3 cut(s) | 299, 776, 1076 |
| DdeI | CTNAG | 7 cut(s) | 140, 189, 698, 786, 943, 1050, 1095 |
| DpnI | GATC | 5 cut(s) | 332, 481, 738, 822, 1089 |
| DpnII | GATC | 5 cut(s) | 330, 479, 736, 820, 1087 |
| DriI | GACNNNNNGTC | 1 cut(s) | 510 |
| EaeI | YGGCCR | 1 cut(s) | 1010 |
| Eam1104I | CTCTTC | 4 cut(s) | 309, 333, 360, 1049 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 510 |
| EarI | CTCTTC | 4 cut(s) | 309, 333, 360, 1049 |
| Eco130I | CCWWGG | 3 cut(s) | 171, 475, 990 |
| EcoT14I | CCWWGG | 3 cut(s) | 171, 475, 990 |
| ErhI | CCWWGG | 3 cut(s) | 171, 475, 990 |
| Esp3I | CGTCTC | 2 cut(s) | 275, 543 |
| FaqI | GGGAC | 2 cut(s) | 94, 765 |
| FbaI | TGATCA | 2 cut(s) | 736, 820 |
| Fnu4HI | GCNGC | 3 cut(s) | 350, 453, 1125 |
| FokI | GGATG | 4 cut(s) | 584, 636, 704, 1112 |
| Fsp4HI | GCNGC | 3 cut(s) | 350, 453, 1125 |
| FspBI | CTAG | 5 cut(s) | 129, 147, 441, 458, 890 |
| FspI | TGCGCA | 1 cut(s) | 486 |
| GlaI | GCGC | 2 cut(s) | 94, 486 |
| GluI | GCNGC | 3 cut(s) | 350, 453, 1125 |
| GsuI | CTGGAG | 1 cut(s) | 432 |
| HaeIII | GGCC | 3 cut(s) | 797, 989, 1012 |
| HhaI | GCGC | 2 cut(s) | 95, 487 |
| Hin6I | GCGC | 2 cut(s) | 93, 485 |
| HinP1I | GCGC | 2 cut(s) | 93, 485 |
| HincII | GTYRAC | 1 cut(s) | 168 |
| HindII | GTYRAC | 1 cut(s) | 168 |
| HinfI | GANTC | 2 cut(s) | 229, 562 |
| HpaI | GTTAAC | 1 cut(s) | 168 |
| HphI | GGTGA | 4 cut(s) | 974, 1026, 1178, 1189 |
| Hpy166II | GTNNAC | 3 cut(s) | 168, 299, 500 |
| Hpy188I | TCNGA | 1 cut(s) | 1096 |
| Hpy188III | TCNNGA | 1 cut(s) | 188 |
| Hpy8I | GTNNAC | 3 cut(s) | 168, 299, 500 |
| HpyAV | CCTTC | 6 cut(s) | 71, 76, 109, 259, 643, 1183 |
| HpyCH4III | ACNGT | 3 cut(s) | 286, 844, 979 |
| HpyCH4IV | ACGT | 1 cut(s) | 259 |
| HpyCH4V | TGCA | 4 cut(s) | 419, 926, 1158, 1175 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 803, 1018, 1155 |
| HpyF3I | CTNAG | 7 cut(s) | 140, 189, 698, 786, 943, 1050, 1095 |
| HpySE526I | ACGT | 1 cut(s) | 259 |
| HspAI | GCGC | 2 cut(s) | 93, 485 |
| Ksp22I | TGATCA | 2 cut(s) | 736, 820 |
| KspAI | GTTAAC | 1 cut(s) | 168 |
| Kzo9I | GATC | 5 cut(s) | 330, 479, 736, 820, 1087 |
| Lsp1109I | GCAGC | 3 cut(s) | 361, 464, 1136 |
| LweI | GCATC | 2 cut(s) | 406, 446 |
| MaeI | CTAG | 5 cut(s) | 129, 147, 441, 458, 890 |
| MaeII | ACGT | 1 cut(s) | 259 |
| MaeIII | GTNAC | 2 cut(s) | 710, 1032 |
| MalI | GATC | 5 cut(s) | 332, 481, 738, 822, 1089 |
| MboI | GATC | 5 cut(s) | 330, 479, 736, 820, 1087 |
| MboII | GAAGA | 6 cut(s) | 326, 350, 377, 1054, 1066, 1094 |
| MfeI | CAATTG | 1 cut(s) | 927 |
| MflI | RGATCY | 1 cut(s) | 479 |
| MhlI | GDGCHC | 1 cut(s) | 185 |
| MluCI | AATT | 8 cut(s) | 102, 374, 582, 603, 755, 901, 927, 1138 |
| MmeI | TCCRAC | 3 cut(s) | 539, 699, 742 |
| MseI | TTAA | 2 cut(s) | 167, 293 |
| MslI | CAYNNNNRTG | 1 cut(s) | 845 |
| MunI | CAATTG | 1 cut(s) | 927 |
| Mva1269I | GAATGC | 2 cut(s) | 943, 1175 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 803, 1018, 1155 |
| NcoI | CCATGG | 2 cut(s) | 475, 990 |
| NdeII | GATC | 5 cut(s) | 330, 479, 736, 820, 1087 |
| NlaIV | GGNNCC | 1 cut(s) | 64 |
| NmuCI | GTSAC | 2 cut(s) | 710, 1032 |
| NsbI | TGCGCA | 1 cut(s) | 486 |
| NspI | RCATGY | 3 cut(s) | 513, 1153, 1162 |
| OliI | CACNNNNGTG | 1 cut(s) | 845 |
| PctI | GAATGC | 2 cut(s) | 943, 1175 |
| PfeI | GAWTC | 2 cut(s) | 229, 562 |
| PkrI | GCNGC | 3 cut(s) | 351, 454, 1126 |
| PspN4I | GGNNCC | 1 cut(s) | 64 |
| PsuI | RGATCY | 1 cut(s) | 479 |
| RsaI | GTAC | 3 cut(s) | 300, 777, 1077 |
| RsaNI | GTAC | 3 cut(s) | 299, 776, 1076 |
| RseI | CAYNNNNRTG | 1 cut(s) | 845 |
| SaqAI | TTAA | 2 cut(s) | 167, 293 |
| SatI | GCNGC | 3 cut(s) | 350, 453, 1125 |
| Sau3AI | GATC | 5 cut(s) | 330, 479, 736, 820, 1087 |
| SduI | GDGCHC | 1 cut(s) | 185 |
| SfaNI | GCATC | 2 cut(s) | 406, 446 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 845 |
| SpeI | ACTAGT | 1 cut(s) | 146 |
| Sse9I | AATT | 8 cut(s) | 102, 374, 582, 603, 755, 901, 927, 1138 |
| SsiI | CCGC | 1 cut(s) | 507 |
| SspI | AATATT | 1 cut(s) | 309 |
| SspMI | CTAG | 5 cut(s) | 129, 147, 441, 458, 890 |
| StyI | CCWWGG | 3 cut(s) | 171, 475, 990 |
| TaaI | ACNGT | 3 cut(s) | 286, 844, 979 |
| TaiI | ACGT | 1 cut(s) | 262 |
| TaqI | TCGA | 1 cut(s) | 532 |
| TasI | AATT | 8 cut(s) | 102, 374, 582, 603, 755, 901, 927, 1138 |
| TatI | WGTACW | 1 cut(s) | 298 |
| TfiI | GAWTC | 2 cut(s) | 229, 562 |
| Tru1I | TTAA | 2 cut(s) | 167, 293 |
| Tru9I | TTAA | 2 cut(s) | 167, 293 |
| TscAI | CASTG | 1 cut(s) | 847 |
| TseFI | GTSAC | 2 cut(s) | 710, 1032 |
| TseI | GCWGC | 3 cut(s) | 349, 452, 1124 |
| Tsp45I | GTSAC | 2 cut(s) | 710, 1032 |
| TspDTI | ATGAA | 5 cut(s) | 90, 540, 981, 1119, 1131 |
| TspRI | CASTG | 1 cut(s) | 847 |
| XapI | RAATTY | 2 cut(s) | 374, 1138 |
| XceI | RCATGY | 3 cut(s) | 513, 1153, 1162 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 875 |
| XspI | CTAG | 5 cut(s) | 129, 147, 441, 458, 890 |