lipid transport
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 304 |
| AccBSI | CCGCTC | 1 cut(s) | 601 |
| AccII | CGCG | 1 cut(s) | 367 |
| AciI | CCGC | 6 cut(s) | 230, 365, 405, 425, 477, 601 |
| AclWI | GGATC | 1 cut(s) | 30 |
| AcsI | RAATTY | 3 cut(s) | 158, 439, 637 |
| AcuI | CTGAAG | 1 cut(s) | 336 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 354, 434 |
| AflII | CTTAAG | 1 cut(s) | 217 |
| AgsI | TTSAA | 2 cut(s) | 645, 670 |
| AjnI | CCWGG | 1 cut(s) | 407 |
| AluBI | AGCT | 5 cut(s) | 118, 314, 380, 565, 674 |
| AluI | AGCT | 5 cut(s) | 118, 314, 380, 565, 674 |
| Alw21I | GWGCWC | 1 cut(s) | 49 |
| Alw44I | GTGCAC | 1 cut(s) | 45 |
| AlwI | GGATC | 1 cut(s) | 30 |
| AoxI | GGCC | 2 cut(s) | 148, 631 |
| ApaLI | GTGCAC | 1 cut(s) | 45 |
| ApeKI | GCWGC | 3 cut(s) | 458, 479, 674 |
| ApoI | RAATTY | 3 cut(s) | 158, 439, 637 |
| AspA2I | CCTAGG | 1 cut(s) | 353 |
| AspLEI | GCGC | 1 cut(s) | 128 |
| AspS9I | GGNCC | 1 cut(s) | 517 |
| AvaII | GGWCC | 1 cut(s) | 517 |
| AvrII | CCTAGG | 1 cut(s) | 353 |
| BaeGI | GKGCMC | 1 cut(s) | 49 |
| Bbv12I | GWGCWC | 1 cut(s) | 49 |
| BbvI | GCAGC | 3 cut(s) | 466, 470, 661 |
| BccI | CCATC | 2 cut(s) | 187, 551 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 174, 208 |
| BciT130I | CCWGG | 1 cut(s) | 409 |
| BfaI | CTAG | 2 cut(s) | 204, 354 |
| BfmI | CTRYAG | 1 cut(s) | 210 |
| BfoI | RGCGCY | 1 cut(s) | 129 |
| BfrI | CTTAAG | 1 cut(s) | 217 |
| BfuAI | ACCTGC | 1 cut(s) | 304 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 341 |
| BglII | AGATCT | 1 cut(s) | 206 |
| BisI | GCNGC | 3 cut(s) | 459, 480, 675 |
| BlnI | CCTAGG | 1 cut(s) | 353 |
| BlsI | GCNGC | 3 cut(s) | 460, 481, 676 |
| Bme1390I | CCNGG | 1 cut(s) | 409 |
| Bme18I | GGWCC | 1 cut(s) | 517 |
| BmgT120I | GGNCC | 1 cut(s) | 517 |
| BmiI | GGNNCC | 1 cut(s) | 177 |
| BmrFI | CCNGG | 1 cut(s) | 409 |
| BmsI | GCATC | 1 cut(s) | 388 |
| BsaJI | CCNNGG | 1 cut(s) | 353 |
| BsaWI | WCCGGW | 1 cut(s) | 41 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 354, 434 |
| Bse1I | ACTGG | 1 cut(s) | 54 |
| BseBI | CCWGG | 1 cut(s) | 409 |
| BseDI | CCNNGG | 1 cut(s) | 353 |
| BseGI | GGATG | 2 cut(s) | 403, 562 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 354, 434 |
| BseMII | CTCAG | 2 cut(s) | 83, 398 |
| BseNI | ACTGG | 1 cut(s) | 54 |
| BseRI | GAGGAG | 3 cut(s) | 551, 608, 611 |
| BseSI | GKGCMC | 1 cut(s) | 49 |
| BseXI | GCAGC | 3 cut(s) | 466, 470, 661 |
| BsgI | GTGCAG | 1 cut(s) | 254 |
| Bsh1236I | CGCG | 1 cut(s) | 367 |
| BshFI | GGCC | 2 cut(s) | 150, 633 |
| BsiHKAI | GWGCWC | 1 cut(s) | 49 |
| BsiSI | CCGG | 1 cut(s) | 42 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 354, 434 |
| BsnI | GGCC | 2 cut(s) | 150, 633 |
| Bsp1286I | GDGCHC | 1 cut(s) | 49 |
| Bsp143I | GATC | 3 cut(s) | 22, 130, 206 |
| BspACI | CCGC | 6 cut(s) | 230, 365, 405, 425, 477, 601 |
| BspANI | GGCC | 2 cut(s) | 150, 633 |
| BspCNI | CTCAG | 2 cut(s) | 82, 397 |
| BspFNI | CGCG | 1 cut(s) | 367 |
| BspLI | GGNNCC | 1 cut(s) | 177 |
| BspMI | ACCTGC | 1 cut(s) | 304 |
| BspPI | GGATC | 1 cut(s) | 30 |
| BspTI | CTTAAG | 1 cut(s) | 217 |
| BsrBI | CCGCTC | 1 cut(s) | 601 |
| BsrI | ACTGG | 1 cut(s) | 54 |
| BssECI | CCNNGG | 1 cut(s) | 353 |
| BssMI | GATC | 3 cut(s) | 22, 130, 206 |
| BssT1I | CCWWGG | 1 cut(s) | 353 |
| Bst2UI | CCWGG | 1 cut(s) | 409 |
| Bst4CI | ACNGT | 1 cut(s) | 259 |
| BstAFI | CTTAAG | 1 cut(s) | 217 |
| BstC8I | GCNNGC | 2 cut(s) | 187, 322 |
| BstDEI | CTNAG | 3 cut(s) | 13, 69, 384 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 432 |
| BstF5I | GGATG | 2 cut(s) | 403, 562 |
| BstFNI | CGCG | 1 cut(s) | 367 |
| BstH2I | RGCGCY | 1 cut(s) | 129 |
| BstHHI | GCGC | 1 cut(s) | 128 |
| BstKTI | GATC | 3 cut(s) | 25, 133, 209 |
| BstMBI | GATC | 3 cut(s) | 22, 130, 206 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 25, 182, 341, 458, 488, 671 |
| BstNI | CCWGG | 1 cut(s) | 409 |
| BstNSI | RCATGY | 1 cut(s) | 655 |
| BstSCI | CCNGG | 1 cut(s) | 407 |
| BstSFI | CTRYAG | 1 cut(s) | 210 |
| BstSLI | GKGCMC | 1 cut(s) | 49 |
| BstUI | CGCG | 1 cut(s) | 367 |
| BstV1I | GCAGC | 3 cut(s) | 466, 470, 661 |
| BstX2I | RGATCY | 1 cut(s) | 206 |
| BstYI | RGATCY | 1 cut(s) | 206 |
| BsuRI | GGCC | 2 cut(s) | 150, 633 |
| BtsCI | GGATG | 2 cut(s) | 403, 562 |
| BtsIMutI | CAGTG | 2 cut(s) | 47, 77 |
| BveI | ACCTGC | 1 cut(s) | 304 |
| Cac8I | GCNNGC | 2 cut(s) | 187, 322 |
| CfoI | GCGC | 1 cut(s) | 128 |
| Cfr13I | GGNCC | 1 cut(s) | 517 |
| CseI | GACGC | 1 cut(s) | 390 |
| CviAII | CATG | 3 cut(s) | 172, 652, 723 |
| DdeI | CTNAG | 3 cut(s) | 13, 69, 384 |
| DpnI | GATC | 3 cut(s) | 24, 132, 208 |
| DpnII | GATC | 3 cut(s) | 22, 130, 206 |
| EciI | GGCGGA | 1 cut(s) | 394 |
| Eco130I | CCWWGG | 1 cut(s) | 353 |
| Eco147I | AGGCCT | 1 cut(s) | 633 |
| Eco47I | GGWCC | 1 cut(s) | 517 |
| Eco57I | CTGAAG | 1 cut(s) | 336 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 432 |
| EcoRII | CCWGG | 1 cut(s) | 407 |
| EcoT14I | CCWWGG | 1 cut(s) | 353 |
| ErhI | CCWWGG | 1 cut(s) | 353 |
| FaeI | CATG | 3 cut(s) | 175, 655, 726 |
| FatI | CATG | 3 cut(s) | 171, 651, 722 |
| FauI | CCCGC | 1 cut(s) | 594 |
| Fnu4HI | GCNGC | 3 cut(s) | 459, 480, 675 |
| FokI | GGATG | 2 cut(s) | 410, 569 |
| Fsp4HI | GCNGC | 3 cut(s) | 459, 480, 675 |
| FspBI | CTAG | 2 cut(s) | 204, 354 |
| GlaI | GCGC | 1 cut(s) | 127 |
| GluI | GCNGC | 3 cut(s) | 459, 480, 675 |
| HaeII | RGCGCY | 1 cut(s) | 129 |
| HaeIII | GGCC | 2 cut(s) | 150, 633 |
| HapII | CCGG | 1 cut(s) | 42 |
| HgaI | GACGC | 1 cut(s) | 390 |
| HhaI | GCGC | 1 cut(s) | 128 |
| Hin1II | CATG | 3 cut(s) | 175, 655, 726 |
| Hin6I | GCGC | 1 cut(s) | 126 |
| HinP1I | GCGC | 1 cut(s) | 126 |
| HincII | GTYRAC | 1 cut(s) | 103 |
| HindII | GTYRAC | 1 cut(s) | 103 |
| HpaII | CCGG | 1 cut(s) | 42 |
| Hpy166II | GTNNAC | 3 cut(s) | 47, 103, 293 |
| Hpy188I | TCNGA | 2 cut(s) | 265, 695 |
| Hpy188III | TCNNGA | 1 cut(s) | 88 |
| Hpy8I | GTNNAC | 3 cut(s) | 47, 103, 293 |
| HpyAV | CCTTC | 2 cut(s) | 442, 676 |
| HpyCH4III | ACNGT | 1 cut(s) | 259 |
| HpyCH4IV | ACGT | 1 cut(s) | 244 |
| HpyCH4V | TGCA | 6 cut(s) | 47, 185, 235, 651, 677, 712 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 25, 182, 341, 458, 488, 671 |
| HpyF3I | CTNAG | 3 cut(s) | 13, 69, 384 |
| HpySE526I | ACGT | 1 cut(s) | 244 |
| Hsp92II | CATG | 3 cut(s) | 175, 655, 726 |
| HspAI | GCGC | 1 cut(s) | 126 |
| Kzo9I | GATC | 3 cut(s) | 22, 130, 206 |
| LmnI | GCTCC | 3 cut(s) | 181, 562, 598 |
| Lsp1109I | GCAGC | 3 cut(s) | 466, 470, 661 |
| LweI | GCATC | 1 cut(s) | 388 |
| MaeI | CTAG | 2 cut(s) | 204, 354 |
| MaeII | ACGT | 1 cut(s) | 244 |
| MalI | GATC | 3 cut(s) | 24, 132, 208 |
| MbiI | CCGCTC | 1 cut(s) | 601 |
| MboI | GATC | 3 cut(s) | 22, 130, 206 |
| MboII | GAAGA | 2 cut(s) | 508, 633 |
| MflI | RGATCY | 1 cut(s) | 206 |
| MhlI | GDGCHC | 1 cut(s) | 49 |
| MluCI | AATT | 4 cut(s) | 77, 158, 439, 637 |
| MnlI | CCTC | 7 cut(s) | 279, 359, 508, 529, 586, 589, 592 |
| MseI | TTAA | 3 cut(s) | 218, 509, 612 |
| MspA1I | CMGCKG | 1 cut(s) | 479 |
| MspCI | CTTAAG | 1 cut(s) | 217 |
| MspI | CCGG | 1 cut(s) | 42 |
| MspR9I | CCNGG | 1 cut(s) | 409 |
| MvaI | CCWGG | 1 cut(s) | 409 |
| MvnI | CGCG | 1 cut(s) | 367 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 25, 182, 341, 458, 488, 671 |
| NdeII | GATC | 3 cut(s) | 22, 130, 206 |
| NlaIII | CATG | 3 cut(s) | 175, 655, 726 |
| NlaIV | GGNNCC | 1 cut(s) | 177 |
| NspI | RCATGY | 1 cut(s) | 655 |
| PceI | AGGCCT | 1 cut(s) | 633 |
| PkrI | GCNGC | 3 cut(s) | 460, 481, 676 |
| Psp6I | CCWGG | 1 cut(s) | 407 |
| PspGI | CCWGG | 1 cut(s) | 407 |
| PspN4I | GGNNCC | 1 cut(s) | 177 |
| PspPI | GGNCC | 1 cut(s) | 517 |
| PsuI | RGATCY | 1 cut(s) | 206 |
| SaqAI | TTAA | 3 cut(s) | 218, 509, 612 |
| SatI | GCNGC | 3 cut(s) | 459, 480, 675 |
| Sau3AI | GATC | 3 cut(s) | 22, 130, 206 |
| Sau96I | GGNCC | 1 cut(s) | 517 |
| ScrFI | CCNGG | 1 cut(s) | 409 |
| SduI | GDGCHC | 1 cut(s) | 49 |
| SfaNI | GCATC | 1 cut(s) | 388 |
| SfcI | CTRYAG | 1 cut(s) | 210 |
| SinI | GGWCC | 1 cut(s) | 517 |
| SmlI | CTYRAG | 1 cut(s) | 217 |
| SmoI | CTYRAG | 1 cut(s) | 217 |
| Sse9I | AATT | 4 cut(s) | 77, 158, 439, 637 |
| SseBI | AGGCCT | 1 cut(s) | 633 |
| SsiI | CCGC | 6 cut(s) | 230, 365, 405, 425, 477, 601 |
| SspMI | CTAG | 2 cut(s) | 204, 354 |
| StuI | AGGCCT | 1 cut(s) | 633 |
| StyD4I | CCNGG | 1 cut(s) | 407 |
| StyI | CCWWGG | 1 cut(s) | 353 |
| TaaI | ACNGT | 1 cut(s) | 259 |
| TaiI | ACGT | 1 cut(s) | 247 |
| TaqI | TCGA | 2 cut(s) | 194, 584 |
| TasI | AATT | 4 cut(s) | 77, 158, 439, 637 |
| Tru1I | TTAA | 3 cut(s) | 218, 509, 612 |
| Tru9I | TTAA | 3 cut(s) | 218, 509, 612 |
| TscAI | CASTG | 2 cut(s) | 54, 77 |
| TseI | GCWGC | 3 cut(s) | 458, 479, 674 |
| TspDTI | ATGAA | 2 cut(s) | 254, 558 |
| TspRI | CASTG | 2 cut(s) | 54, 77 |
| Vha464I | CTTAAG | 1 cut(s) | 217 |
| VneI | GTGCAC | 1 cut(s) | 45 |
| VpaK11BI | GGWCC | 1 cut(s) | 517 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 432 |
| XapI | RAATTY | 3 cut(s) | 158, 439, 637 |
| XceI | RCATGY | 1 cut(s) | 655 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 451 |
| XmaJI | CCTAGG | 1 cut(s) | 353 |
| XspI | CTAG | 2 cut(s) | 204, 354 |