source UniProtKB
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peptidase_C48 | PF02902 | 96 - 221 | 5.8e-12 | Ulp1 protease family, C-terminal catalytic domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 215, 301 |
| AccI | GTMKAC | 1 cut(s) | 363 |
| AciI | CCGC | 1 cut(s) | 494 |
| AclWI | GGATC | 2 cut(s) | 368, 381 |
| AcuI | CTGAAG | 1 cut(s) | 369 |
| AdeI | CACNNNGTG | 1 cut(s) | 594 |
| AfaI | GTAC | 1 cut(s) | 339 |
| AgsI | TTSAA | 1 cut(s) | 163 |
| AjnI | CCWGG | 1 cut(s) | 624 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 229, 261 |
| AluBI | AGCT | 2 cut(s) | 123, 576 |
| AluI | AGCT | 2 cut(s) | 123, 576 |
| Alw26I | GTCTC | 1 cut(s) | 382 |
| AlwI | GGATC | 2 cut(s) | 368, 381 |
| ApeKI | GCWGC | 2 cut(s) | 120, 123 |
| AseI | ATTAAT | 1 cut(s) | 87 |
| AsuHPI | GGTGA | 2 cut(s) | 580, 682 |
| BamHI | GGATCC | 1 cut(s) | 373 |
| BanI | GGYRCC | 2 cut(s) | 215, 301 |
| BbsI | GAAGAC | 2 cut(s) | 360, 680 |
| BbvI | GCAGC | 2 cut(s) | 110, 132 |
| BciT130I | CCWGG | 1 cut(s) | 626 |
| BcoDI | GTCTC | 1 cut(s) | 382 |
| BisI | GCNGC | 2 cut(s) | 121, 124 |
| BlsI | GCNGC | 2 cut(s) | 122, 125 |
| Bme1390I | CCNGG | 1 cut(s) | 626 |
| BmiI | GGNNCC | 3 cut(s) | 217, 303, 375 |
| BmrFI | CCNGG | 1 cut(s) | 626 |
| BmsI | GCATC | 3 cut(s) | 141, 318, 438 |
| BpiI | GAAGAC | 2 cut(s) | 360, 680 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 27 |
| Bpu10I | CCTNAGC | 1 cut(s) | 504 |
| BpuEI | CTTGAG | 1 cut(s) | 437 |
| BsaJI | CCNNGG | 1 cut(s) | 624 |
| BseBI | CCWGG | 1 cut(s) | 626 |
| BseDI | CCNNGG | 1 cut(s) | 624 |
| BseGI | GGATG | 3 cut(s) | 52, 323, 333 |
| BseMII | CTCAG | 2 cut(s) | 355, 495 |
| BseRI | GAGGAG | 1 cut(s) | 400 |
| BseXI | GCAGC | 2 cut(s) | 110, 132 |
| BsgI | GTGCAG | 1 cut(s) | 379 |
| BshNI | GGYRCC | 2 cut(s) | 215, 301 |
| BsmAI | GTCTC | 1 cut(s) | 382 |
| Bsp143I | GATC | 1 cut(s) | 373 |
| BspACI | CCGC | 1 cut(s) | 494 |
| BspCNI | CTCAG | 2 cut(s) | 354, 496 |
| BspLI | GGNNCC | 3 cut(s) | 217, 303, 375 |
| BspPI | GGATC | 2 cut(s) | 368, 381 |
| BspT107I | GGYRCC | 2 cut(s) | 215, 301 |
| BssECI | CCNNGG | 1 cut(s) | 624 |
| BssMI | GATC | 1 cut(s) | 373 |
| Bst2UI | CCWGG | 1 cut(s) | 626 |
| Bst4CI | ACNGT | 3 cut(s) | 337, 491, 527 |
| Bst6I | CTCTTC | 1 cut(s) | 598 |
| BstDEI | CTNAG | 3 cut(s) | 341, 504, 577 |
| BstF5I | GGATG | 3 cut(s) | 52, 323, 333 |
| BstKTI | GATC | 1 cut(s) | 376 |
| BstMAI | GTCTC | 1 cut(s) | 382 |
| BstMBI | GATC | 1 cut(s) | 373 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 129 |
| BstNI | CCWGG | 1 cut(s) | 626 |
| BstSCI | CCNGG | 1 cut(s) | 624 |
| BstV1I | GCAGC | 2 cut(s) | 110, 132 |
| BstV2I | GAAGAC | 2 cut(s) | 360, 680 |
| BstX2I | RGATCY | 1 cut(s) | 373 |
| BstYI | RGATCY | 1 cut(s) | 373 |
| BtsCI | GGATG | 3 cut(s) | 52, 323, 333 |
| Csp6I | GTAC | 1 cut(s) | 338 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 508, 543 |
| CviAII | CATG | 3 cut(s) | 80, 103, 370 |
| CviJI | RGCY | 3 cut(s) | 123, 268, 576 |
| CviKI_1 | RGCY | 3 cut(s) | 123, 268, 576 |
| CviQI | GTAC | 1 cut(s) | 338 |
| DdeI | CTNAG | 3 cut(s) | 341, 504, 577 |
| DpnI | GATC | 1 cut(s) | 375 |
| DpnII | GATC | 1 cut(s) | 373 |
| DraIII | CACNNNGTG | 1 cut(s) | 594 |
| Eam1104I | CTCTTC | 1 cut(s) | 598 |
| EarI | CTCTTC | 1 cut(s) | 598 |
| Eco57I | CTGAAG | 1 cut(s) | 369 |
| EcoRII | CCWGG | 1 cut(s) | 624 |
| FaeI | CATG | 3 cut(s) | 83, 106, 373 |
| FatI | CATG | 3 cut(s) | 79, 102, 369 |
| FauI | CCCGC | 1 cut(s) | 487 |
| FblI | GTMKAC | 1 cut(s) | 363 |
| Fnu4HI | GCNGC | 2 cut(s) | 121, 124 |
| FokI | GGATG | 3 cut(s) | 39, 330, 340 |
| Fsp4HI | GCNGC | 2 cut(s) | 121, 124 |
| GluI | GCNGC | 2 cut(s) | 121, 124 |
| Hin1II | CATG | 3 cut(s) | 83, 106, 373 |
| HinfI | GANTC | 1 cut(s) | 390 |
| HphI | GGTGA | 2 cut(s) | 580, 682 |
| Hpy166II | GTNNAC | 1 cut(s) | 364 |
| Hpy188I | TCNGA | 3 cut(s) | 50, 291, 647 |
| Hpy188III | TCNNGA | 4 cut(s) | 315, 347, 454, 503 |
| Hpy8I | GTNNAC | 1 cut(s) | 364 |
| HpyAV | CCTTC | 3 cut(s) | 66, 100, 547 |
| HpyCH4III | ACNGT | 3 cut(s) | 337, 491, 527 |
| HpyCH4V | TGCA | 3 cut(s) | 75, 126, 396 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 129 |
| HpyF3I | CTNAG | 3 cut(s) | 341, 504, 577 |
| Hsp92II | CATG | 3 cut(s) | 83, 106, 373 |
| Kzo9I | GATC | 1 cut(s) | 373 |
| LpnPI | CCDG | 7 cut(s) | 300, 360, 384, 446, 516, 611, 638 |
| Lsp1109I | GCAGC | 2 cut(s) | 110, 132 |
| LweI | GCATC | 3 cut(s) | 141, 318, 438 |
| MaeIII | GTNAC | 1 cut(s) | 97 |
| MalI | GATC | 1 cut(s) | 375 |
| MboI | GATC | 1 cut(s) | 373 |
| MboII | GAAGA | 7 cut(s) | 362, 365, 421, 578, 615, 641, 685 |
| MfeI | CAATTG | 1 cut(s) | 237 |
| MflI | RGATCY | 1 cut(s) | 373 |
| MluCI | AATT | 2 cut(s) | 18, 237 |
| MlyI | GAGTC | 1 cut(s) | 384 |
| MmeI | TCCRAC | 1 cut(s) | 169 |
| MnlI | CCTC | 3 cut(s) | 378, 450, 599 |
| MseI | TTAA | 2 cut(s) | 87, 380 |
| MspA1I | CMGCKG | 1 cut(s) | 123 |
| MspR9I | CCNGG | 1 cut(s) | 626 |
| MunI | CAATTG | 1 cut(s) | 237 |
| MvaI | CCWGG | 1 cut(s) | 626 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 129 |
| NdeII | GATC | 1 cut(s) | 373 |
| NlaIII | CATG | 3 cut(s) | 83, 106, 373 |
| NlaIV | GGNNCC | 3 cut(s) | 217, 303, 375 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 280 |
| PflFI | GACNNNGTC | 1 cut(s) | 359 |
| PkrI | GCNGC | 2 cut(s) | 122, 125 |
| PleI | GAGTC | 1 cut(s) | 384 |
| PpsI | GAGTC | 1 cut(s) | 384 |
| PshBI | ATTAAT | 1 cut(s) | 87 |
| Psp6I | CCWGG | 1 cut(s) | 624 |
| PspGI | CCWGG | 1 cut(s) | 624 |
| PspN4I | GGNNCC | 3 cut(s) | 217, 303, 375 |
| PsuI | RGATCY | 1 cut(s) | 373 |
| PsyI | GACNNNGTC | 1 cut(s) | 359 |
| PvuII | CAGCTG | 1 cut(s) | 123 |
| RsaI | GTAC | 1 cut(s) | 339 |
| RsaNI | GTAC | 1 cut(s) | 338 |
| SaqAI | TTAA | 2 cut(s) | 87, 380 |
| SatI | GCNGC | 2 cut(s) | 121, 124 |
| Sau3AI | GATC | 1 cut(s) | 373 |
| SchI | GAGTC | 1 cut(s) | 384 |
| ScrFI | CCNGG | 1 cut(s) | 626 |
| SetI | ASST | 3 cut(s) | 125, 150, 578 |
| SfaNI | GCATC | 3 cut(s) | 141, 318, 438 |
| SmlI | CTYRAG | 1 cut(s) | 452 |
| SmoI | CTYRAG | 1 cut(s) | 452 |
| Sse9I | AATT | 2 cut(s) | 18, 237 |
| SsiI | CCGC | 1 cut(s) | 494 |
| SspI | AATATT | 1 cut(s) | 415 |
| StyD4I | CCNGG | 1 cut(s) | 624 |
| TaaI | ACNGT | 3 cut(s) | 337, 491, 527 |
| TaqI | TCGA | 1 cut(s) | 33 |
| TasI | AATT | 2 cut(s) | 18, 237 |
| TatI | WGTACW | 1 cut(s) | 337 |
| Tru1I | TTAA | 2 cut(s) | 87, 380 |
| Tru9I | TTAA | 2 cut(s) | 87, 380 |
| TseI | GCWGC | 2 cut(s) | 120, 123 |
| TspDTI | ATGAA | 4 cut(s) | 51, 119, 358, 566 |
| TspGWI | ACGGA | 1 cut(s) | 530 |
| Tth111I | GACNNNGTC | 1 cut(s) | 359 |
| VspI | ATTAAT | 1 cut(s) | 87 |
| XmiI | GTMKAC | 1 cut(s) | 363 |