source UniProtKB
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peptidase_C48 | PF02902 | 146 - 269 | 1e-13 | Ulp1 protease family, C-terminal catalytic domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 234 |
| Acc36I | ACCTGC | 2 cut(s) | 300, 629 |
| AccB1I | GGYRCC | 1 cut(s) | 359 |
| AccI | GTMKAC | 1 cut(s) | 507 |
| AccIII | TCCGGA | 1 cut(s) | 646 |
| AciI | CCGC | 1 cut(s) | 707 |
| AclI | AACGTT | 1 cut(s) | 489 |
| AclWI | GGATC | 2 cut(s) | 512, 525 |
| AcoI | YGGCCR | 1 cut(s) | 430 |
| AcsI | RAATTY | 1 cut(s) | 806 |
| AcyI | GRCGYC | 1 cut(s) | 360 |
| AfaI | GTAC | 1 cut(s) | 16 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 118, 549 |
| AgsI | TTSAA | 3 cut(s) | 205, 307, 494 |
| AjnI | CCWGG | 1 cut(s) | 623 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 242, 274, 373, 405 |
| AluBI | AGCT | 4 cut(s) | 174, 267, 288, 404 |
| AluI | AGCT | 4 cut(s) | 174, 267, 288, 404 |
| AlwI | GGATC | 2 cut(s) | 512, 525 |
| Aor13HI | TCCGGA | 1 cut(s) | 646 |
| AoxI | GGCC | 2 cut(s) | 430, 801 |
| ApeKI | GCWGC | 6 cut(s) | 5, 171, 267, 758, 769, 772 |
| ApoI | RAATTY | 1 cut(s) | 806 |
| AspLEI | GCGC | 1 cut(s) | 362 |
| AspS9I | GGNCC | 1 cut(s) | 801 |
| BalI | TGGCCA | 1 cut(s) | 432 |
| BamHI | GGATCC | 1 cut(s) | 517 |
| BanI | GGYRCC | 1 cut(s) | 359 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 523, 555 |
| BbsI | GAAGAC | 1 cut(s) | 504 |
| BbvI | GCAGC | 6 cut(s) | 17, 183, 254, 770, 781, 784 |
| BccI | CCATC | 3 cut(s) | 284, 313, 581 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 364, 398 |
| BciT130I | CCWGG | 1 cut(s) | 625 |
| BciVI | GTATCC | 1 cut(s) | 283 |
| BfmI | CTRYAG | 1 cut(s) | 169 |
| BfoI | RGCGCY | 1 cut(s) | 363 |
| BfuAI | ACCTGC | 2 cut(s) | 300, 629 |
| BfuI | GTATCC | 1 cut(s) | 283 |
| BglII | AGATCT | 1 cut(s) | 70 |
| BisI | GCNGC | 6 cut(s) | 6, 172, 268, 759, 770, 773 |
| BlsI | GCNGC | 6 cut(s) | 7, 173, 269, 760, 771, 774 |
| Bme1390I | CCNGG | 1 cut(s) | 625 |
| BmgT120I | GGNCC | 1 cut(s) | 801 |
| BmiI | GGNNCC | 2 cut(s) | 361, 519 |
| BmrFI | CCNGG | 1 cut(s) | 625 |
| BmsI | GCATC | 3 cut(s) | 116, 462, 772 |
| BpiI | GAAGAC | 1 cut(s) | 504 |
| BpuEI | CTTGAG | 1 cut(s) | 442 |
| BsaHI | GRCGYC | 1 cut(s) | 360 |
| BsaWI | WCCGGW | 2 cut(s) | 542, 646 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 118, 549 |
| Bse3DI | GCAATG | 1 cut(s) | 86 |
| BseAI | TCCGGA | 1 cut(s) | 646 |
| BseBI | CCWGG | 1 cut(s) | 625 |
| BseGI | GGATG | 4 cut(s) | 107, 196, 417, 477 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 118, 549 |
| BseMI | GCAATG | 1 cut(s) | 86 |
| BseXI | GCAGC | 6 cut(s) | 17, 183, 254, 770, 781, 784 |
| BsgI | GTGCAG | 1 cut(s) | 657 |
| BshFI | GGCC | 2 cut(s) | 432, 803 |
| BshNI | GGYRCC | 1 cut(s) | 359 |
| BsiSI | CCGG | 2 cut(s) | 543, 647 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 118, 549 |
| BsnI | GGCC | 2 cut(s) | 432, 803 |
| Bsp13I | TCCGGA | 1 cut(s) | 646 |
| Bsp143I | GATC | 2 cut(s) | 70, 517 |
| BspACI | CCGC | 1 cut(s) | 707 |
| BspANI | GGCC | 2 cut(s) | 432, 803 |
| BspEI | TCCGGA | 1 cut(s) | 646 |
| BspLI | GGNNCC | 2 cut(s) | 361, 519 |
| BspMAI | CTGCAG | 1 cut(s) | 173 |
| BspMI | ACCTGC | 2 cut(s) | 300, 629 |
| BspPI | GGATC | 2 cut(s) | 512, 525 |
| BspT107I | GGYRCC | 1 cut(s) | 359 |
| BsrDI | GCAATG | 1 cut(s) | 86 |
| BssMI | GATC | 2 cut(s) | 70, 517 |
| BssNI | GRCGYC | 1 cut(s) | 360 |
| Bst2UI | CCWGG | 1 cut(s) | 625 |
| Bst4CI | ACNGT | 3 cut(s) | 481, 505, 671 |
| Bst6I | CTCTTC | 2 cut(s) | 23, 742 |
| BstACI | GRCGYC | 1 cut(s) | 360 |
| BstDEI | CTNAG | 2 cut(s) | 219, 721 |
| BstF5I | GGATG | 4 cut(s) | 107, 196, 417, 477 |
| BstH2I | RGCGCY | 1 cut(s) | 363 |
| BstHHI | GCGC | 1 cut(s) | 362 |
| BstKTI | GATC | 2 cut(s) | 73, 520 |
| BstMBI | GATC | 2 cut(s) | 70, 517 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 366 |
| BstNI | CCWGG | 1 cut(s) | 625 |
| BstNSI | RCATGY | 1 cut(s) | 130 |
| BstSCI | CCNGG | 1 cut(s) | 623 |
| BstSFI | CTRYAG | 1 cut(s) | 169 |
| BstV1I | GCAGC | 6 cut(s) | 17, 183, 254, 770, 781, 784 |
| BstV2I | GAAGAC | 1 cut(s) | 504 |
| BstX2I | RGATCY | 2 cut(s) | 70, 517 |
| BstYI | RGATCY | 2 cut(s) | 70, 517 |
| BsuI | GTATCC | 1 cut(s) | 283 |
| BsuRI | GGCC | 2 cut(s) | 432, 803 |
| BtsCI | GGATG | 4 cut(s) | 107, 196, 417, 477 |
| BtsIMutI | CAGTG | 1 cut(s) | 501 |
| BveI | ACCTGC | 2 cut(s) | 300, 629 |
| CfoI | GCGC | 1 cut(s) | 362 |
| Cfr13I | GGNCC | 1 cut(s) | 801 |
| Csp6I | GTAC | 1 cut(s) | 15 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 337, 372 |
| CviAII | CATG | 5 cut(s) | 127, 247, 296, 514, 593 |
| CviJI | RGCY | 9 cut(s) | 174, 267, 288, 345, 369, 404, 432, 675, 803 |
| CviKI_1 | RGCY | 9 cut(s) | 174, 267, 288, 345, 369, 404, 432, 675, 803 |
| CviQI | GTAC | 1 cut(s) | 15 |
| DdeI | CTNAG | 2 cut(s) | 219, 721 |
| DinI | GGCGCC | 1 cut(s) | 361 |
| DpnI | GATC | 2 cut(s) | 72, 519 |
| DpnII | GATC | 2 cut(s) | 70, 517 |
| EaeI | YGGCCR | 1 cut(s) | 430 |
| Eam1104I | CTCTTC | 2 cut(s) | 23, 742 |
| EarI | CTCTTC | 2 cut(s) | 23, 742 |
| EcoRII | CCWGG | 1 cut(s) | 623 |
| EcoT22I | ATGCAT | 1 cut(s) | 128 |
| EgeI | GGCGCC | 1 cut(s) | 361 |
| EheI | GGCGCC | 1 cut(s) | 361 |
| FaeI | CATG | 5 cut(s) | 130, 250, 299, 517, 596 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 129, 161 |
| FatI | CATG | 5 cut(s) | 126, 246, 295, 513, 592 |
| FblI | GTMKAC | 1 cut(s) | 507 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 172, 268, 759, 770, 773 |
| FokI | GGATG | 4 cut(s) | 94, 183, 424, 484 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 172, 268, 759, 770, 773 |
| GlaI | GCGC | 1 cut(s) | 361 |
| GluI | GCNGC | 6 cut(s) | 6, 172, 268, 759, 770, 773 |
| HaeII | RGCGCY | 1 cut(s) | 363 |
| HaeIII | GGCC | 2 cut(s) | 432, 803 |
| HapII | CCGG | 2 cut(s) | 543, 647 |
| HhaI | GCGC | 1 cut(s) | 362 |
| Hin1I | GRCGYC | 1 cut(s) | 360 |
| Hin1II | CATG | 5 cut(s) | 130, 250, 299, 517, 596 |
| Hin6I | GCGC | 1 cut(s) | 360 |
| HinP1I | GCGC | 1 cut(s) | 360 |
| HinfI | GANTC | 1 cut(s) | 83 |
| HpaII | CCGG | 2 cut(s) | 543, 647 |
| Hpy166II | GTNNAC | 2 cut(s) | 508, 565 |
| Hpy188I | TCNGA | 4 cut(s) | 156, 194, 335, 791 |
| Hpy188III | TCNNGA | 2 cut(s) | 74, 647 |
| Hpy8I | GTNNAC | 2 cut(s) | 508, 565 |
| HpyAV | CCTTC | 3 cut(s) | 244, 691, 748 |
| HpyCH4III | ACNGT | 3 cut(s) | 481, 505, 671 |
| HpyCH4IV | ACGT | 1 cut(s) | 489 |
| HpyCH4V | TGCA | 7 cut(s) | 107, 126, 171, 295, 398, 638, 785 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 366 |
| HpyF3I | CTNAG | 2 cut(s) | 219, 721 |
| HpySE526I | ACGT | 1 cut(s) | 489 |
| Hsp92I | GRCGYC | 1 cut(s) | 360 |
| Hsp92II | CATG | 5 cut(s) | 130, 250, 299, 517, 596 |
| HspAI | GCGC | 1 cut(s) | 360 |
| KasI | GGCGCC | 1 cut(s) | 359 |
| Kpn2I | TCCGGA | 1 cut(s) | 646 |
| Kzo9I | GATC | 2 cut(s) | 70, 517 |
| LmnI | GCTCC | 1 cut(s) | 649 |
| LpnPI | CCDG | 9 cut(s) | 59, 117, 305, 446, 556, 610, 624, 637, 660 |
| Lsp1109I | GCAGC | 6 cut(s) | 17, 183, 254, 770, 781, 784 |
| LweI | GCATC | 3 cut(s) | 116, 462, 772 |
| MaeII | ACGT | 1 cut(s) | 489 |
| MaeIII | GTNAC | 1 cut(s) | 214 |
| MalI | GATC | 2 cut(s) | 72, 519 |
| MboI | GATC | 2 cut(s) | 70, 517 |
| MboII | GAAGA | 9 cut(s) | 37, 40, 56, 80, 433, 506, 509, 543, 759 |
| MflI | RGATCY | 2 cut(s) | 70, 517 |
| MlsI | TGGCCA | 1 cut(s) | 432 |
| MluCI | AATT | 2 cut(s) | 631, 806 |
| MluNI | TGGCCA | 1 cut(s) | 432 |
| Mly113I | GGCGCC | 1 cut(s) | 360 |
| MmeI | TCCRAC | 1 cut(s) | 313 |
| MnlI | CCTC | 3 cut(s) | 58, 703, 743 |
| Mox20I | TGGCCA | 1 cut(s) | 432 |
| Mph1103I | ATGCAT | 1 cut(s) | 128 |
| MroI | TCCGGA | 1 cut(s) | 646 |
| MscI | TGGCCA | 1 cut(s) | 432 |
| MseI | TTAA | 4 cut(s) | 114, 147, 524, 816 |
| MslI | CAYNNNNRTG | 3 cut(s) | 281, 393, 780 |
| Msp20I | TGGCCA | 1 cut(s) | 432 |
| MspI | CCGG | 2 cut(s) | 543, 647 |
| MspR9I | CCNGG | 1 cut(s) | 625 |
| MvaI | CCWGG | 1 cut(s) | 625 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 366 |
| NarI | GGCGCC | 1 cut(s) | 360 |
| NdeII | GATC | 2 cut(s) | 70, 517 |
| NlaIII | CATG | 5 cut(s) | 130, 250, 299, 517, 596 |
| NlaIV | GGNNCC | 2 cut(s) | 361, 519 |
| NsiI | ATGCAT | 1 cut(s) | 128 |
| NspI | RCATGY | 1 cut(s) | 130 |
| PfeI | GAWTC | 1 cut(s) | 83 |
| PflFI | GACNNNGTC | 1 cut(s) | 503 |
| PkrI | GCNGC | 6 cut(s) | 7, 173, 269, 760, 771, 774 |
| PluTI | GGCGCC | 1 cut(s) | 363 |
| PsiI | TTATAA | 1 cut(s) | 234 |
| Psp1406I | AACGTT | 1 cut(s) | 489 |
| Psp6I | CCWGG | 1 cut(s) | 623 |
| PspGI | CCWGG | 1 cut(s) | 623 |
| PspN4I | GGNNCC | 2 cut(s) | 361, 519 |
| PspPI | GGNCC | 1 cut(s) | 801 |
| PstI | CTGCAG | 1 cut(s) | 173 |
| PsuI | RGATCY | 2 cut(s) | 70, 517 |
| PsyI | GACNNNGTC | 1 cut(s) | 503 |
| RsaI | GTAC | 1 cut(s) | 16 |
| RsaNI | GTAC | 1 cut(s) | 15 |
| RseI | CAYNNNNRTG | 3 cut(s) | 281, 393, 780 |
| SaqAI | TTAA | 4 cut(s) | 114, 147, 524, 816 |
| SatI | GCNGC | 6 cut(s) | 6, 172, 268, 759, 770, 773 |
| Sau3AI | GATC | 2 cut(s) | 70, 517 |
| Sau96I | GGNCC | 1 cut(s) | 801 |
| ScrFI | CCNGG | 1 cut(s) | 625 |
| SetI | ASST | 9 cut(s) | 176, 269, 290, 294, 406, 492, 610, 626, 643 |
| SfaNI | GCATC | 3 cut(s) | 116, 462, 772 |
| SfcI | CTRYAG | 1 cut(s) | 169 |
| SfoI | GGCGCC | 1 cut(s) | 361 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 281, 393, 780 |
| SmlI | CTYRAG | 1 cut(s) | 457 |
| SmoI | CTYRAG | 1 cut(s) | 457 |
| Sse9I | AATT | 2 cut(s) | 631, 806 |
| SsiI | CCGC | 1 cut(s) | 707 |
| SspDI | GGCGCC | 1 cut(s) | 359 |
| StyD4I | CCNGG | 1 cut(s) | 623 |
| TaaI | ACNGT | 3 cut(s) | 481, 505, 671 |
| TaiI | ACGT | 1 cut(s) | 492 |
| TaqI | TCGA | 3 cut(s) | 324, 384, 610 |
| TasI | AATT | 2 cut(s) | 631, 806 |
| TatI | WGTACW | 1 cut(s) | 14 |
| TfiI | GAWTC | 1 cut(s) | 83 |
| Tru1I | TTAA | 4 cut(s) | 114, 147, 524, 816 |
| Tru9I | TTAA | 4 cut(s) | 114, 147, 524, 816 |
| TscAI | CASTG | 1 cut(s) | 508 |
| TseI | GCWGC | 6 cut(s) | 5, 171, 267, 758, 769, 772 |
| TspDTI | ATGAA | 7 cut(s) | 38, 75, 195, 263, 502, 670, 710 |
| TspGWI | ACGGA | 1 cut(s) | 189 |
| TspRI | CASTG | 1 cut(s) | 508 |
| Tth111I | GACNNNGTC | 1 cut(s) | 503 |
| XapI | RAATTY | 1 cut(s) | 806 |
| XceI | RCATGY | 1 cut(s) | 130 |
| XmiI | GTMKAC | 1 cut(s) | 507 |
| Zsp2I | ATGCAT | 1 cut(s) | 128 |