Belongs to the histone deacetylase family. HD Type 1 subfamily
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 109 |
| Acc36I | ACCTGC | 1 cut(s) | 109 |
| AccB1I | GGYRCC | 2 cut(s) | 115, 349 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 143 |
| AccI | GTMKAC | 2 cut(s) | 171, 300 |
| AciI | CCGC | 3 cut(s) | 15, 107, 113 |
| AclWI | GGATC | 1 cut(s) | 487 |
| AcuI | CTGAAG | 2 cut(s) | 160, 462 |
| AcyI | GRCGYC | 1 cut(s) | 77 |
| AdeI | CACNNNGTG | 1 cut(s) | 229 |
| AfaI | GTAC | 2 cut(s) | 214, 539 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 143 |
| AgsI | TTSAA | 1 cut(s) | 329 |
| AjnI | CCWGG | 1 cut(s) | 136 |
| AluBI | AGCT | 1 cut(s) | 336 |
| AluI | AGCT | 1 cut(s) | 336 |
| Alw26I | GTCTC | 1 cut(s) | 520 |
| AlwI | GGATC | 1 cut(s) | 487 |
| AoxI | GGCC | 1 cut(s) | 179 |
| ApeKI | GCWGC | 2 cut(s) | 165, 341 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 457, 489 |
| AspLEI | GCGC | 1 cut(s) | 85 |
| AspS9I | GGNCC | 1 cut(s) | 180 |
| AsuHPI | GGTGA | 3 cut(s) | 106, 215, 404 |
| BanI | GGYRCC | 2 cut(s) | 115, 349 |
| BbsI | GAAGAC | 1 cut(s) | 66 |
| BbvI | GCAGC | 2 cut(s) | 177, 353 |
| BccI | CCATC | 6 cut(s) | 74, 133, 195, 228, 404, 428 |
| BciT130I | CCWGG | 1 cut(s) | 138 |
| BcoDI | GTCTC | 1 cut(s) | 520 |
| BfuAI | ACCTGC | 1 cut(s) | 109 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 205 |
| BisI | GCNGC | 2 cut(s) | 166, 342 |
| BlsI | GCNGC | 2 cut(s) | 167, 343 |
| Bme1390I | CCNGG | 1 cut(s) | 138 |
| BmgT120I | GGNCC | 1 cut(s) | 180 |
| BmiI | GGNNCC | 3 cut(s) | 117, 351, 438 |
| BmrFI | CCNGG | 1 cut(s) | 138 |
| BmsI | GCATC | 2 cut(s) | 123, 366 |
| BpiI | GAAGAC | 1 cut(s) | 66 |
| BsaHI | GRCGYC | 1 cut(s) | 77 |
| BsaJI | CCNNGG | 1 cut(s) | 137 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 88, 118 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 143 |
| Bse3DI | GCAATG | 3 cut(s) | 24, 351, 528 |
| BseBI | CCWGG | 1 cut(s) | 138 |
| BseDI | CCNNGG | 1 cut(s) | 137 |
| BseGI | GGATG | 3 cut(s) | 163, 187, 313 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 143 |
| BseMI | GCAATG | 3 cut(s) | 24, 351, 528 |
| BseMII | CTCAG | 1 cut(s) | 333 |
| BseXI | GCAGC | 2 cut(s) | 177, 353 |
| BshFI | GGCC | 1 cut(s) | 181 |
| BshNI | GGYRCC | 2 cut(s) | 115, 349 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 143 |
| BsmAI | GTCTC | 1 cut(s) | 520 |
| BsnI | GGCC | 1 cut(s) | 181 |
| Bsp143I | GATC | 2 cut(s) | 241, 479 |
| BspACI | CCGC | 3 cut(s) | 15, 107, 113 |
| BspANI | GGCC | 1 cut(s) | 181 |
| BspCNI | CTCAG | 1 cut(s) | 332 |
| BspLI | GGNNCC | 3 cut(s) | 117, 351, 438 |
| BspMI | ACCTGC | 1 cut(s) | 109 |
| BspPI | GGATC | 1 cut(s) | 487 |
| BspT107I | GGYRCC | 2 cut(s) | 115, 349 |
| BsrDI | GCAATG | 3 cut(s) | 24, 351, 528 |
| BssECI | CCNNGG | 1 cut(s) | 137 |
| BssMI | GATC | 2 cut(s) | 241, 479 |
| BssNI | GRCGYC | 1 cut(s) | 77 |
| Bst2UI | CCWGG | 1 cut(s) | 138 |
| Bst6I | CTCTTC | 1 cut(s) | 278 |
| BstACI | GRCGYC | 1 cut(s) | 77 |
| BstC8I | GCNNGC | 3 cut(s) | 81, 111, 502 |
| BstDEI | CTNAG | 1 cut(s) | 319 |
| BstF5I | GGATG | 3 cut(s) | 163, 187, 313 |
| BstHHI | GCGC | 1 cut(s) | 85 |
| BstKTI | GATC | 2 cut(s) | 244, 482 |
| BstMAI | GTCTC | 1 cut(s) | 520 |
| BstMBI | GATC | 2 cut(s) | 241, 479 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 14, 110, 115, 205, 347 |
| BstNI | CCWGG | 1 cut(s) | 138 |
| BstSCI | CCNGG | 1 cut(s) | 136 |
| BstV1I | GCAGC | 2 cut(s) | 177, 353 |
| BstV2I | GAAGAC | 1 cut(s) | 66 |
| BsuRI | GGCC | 1 cut(s) | 181 |
| BtsCI | GGATG | 3 cut(s) | 163, 187, 313 |
| BveI | ACCTGC | 1 cut(s) | 109 |
| Cac8I | GCNNGC | 3 cut(s) | 81, 111, 502 |
| CfoI | GCGC | 1 cut(s) | 85 |
| Cfr13I | GGNCC | 1 cut(s) | 180 |
| CseI | GACGC | 2 cut(s) | 85, 157 |
| Csp6I | GTAC | 2 cut(s) | 213, 538 |
| CviAII | CATG | 3 cut(s) | 304, 433, 505 |
| CviJI | RGCY | 4 cut(s) | 181, 199, 208, 336 |
| CviKI_1 | RGCY | 4 cut(s) | 181, 199, 208, 336 |
| CviQI | GTAC | 2 cut(s) | 213, 538 |
| DdeI | CTNAG | 1 cut(s) | 319 |
| DpnI | GATC | 2 cut(s) | 243, 481 |
| DpnII | GATC | 2 cut(s) | 241, 479 |
| DraIII | CACNNNGTG | 1 cut(s) | 229 |
| Eam1104I | CTCTTC | 1 cut(s) | 278 |
| EarI | CTCTTC | 1 cut(s) | 278 |
| Eco57I | CTGAAG | 2 cut(s) | 160, 462 |
| EcoRII | CCWGG | 1 cut(s) | 136 |
| FaeI | CATG | 3 cut(s) | 307, 436, 508 |
| FatI | CATG | 3 cut(s) | 303, 432, 504 |
| FauNDI | CATATG | 1 cut(s) | 238 |
| FblI | GTMKAC | 2 cut(s) | 171, 300 |
| Fnu4HI | GCNGC | 2 cut(s) | 166, 342 |
| FokI | GGATG | 3 cut(s) | 170, 174, 320 |
| Fsp4HI | GCNGC | 2 cut(s) | 166, 342 |
| GlaI | GCGC | 1 cut(s) | 84 |
| GluI | GCNGC | 2 cut(s) | 166, 342 |
| HaeIII | GGCC | 1 cut(s) | 181 |
| HgaI | GACGC | 2 cut(s) | 85, 157 |
| HhaI | GCGC | 1 cut(s) | 85 |
| Hin1I | GRCGYC | 1 cut(s) | 77 |
| Hin1II | CATG | 3 cut(s) | 307, 436, 508 |
| Hin6I | GCGC | 1 cut(s) | 83 |
| HinP1I | GCGC | 1 cut(s) | 83 |
| HincII | GTYRAC | 1 cut(s) | 301 |
| HindII | GTYRAC | 1 cut(s) | 301 |
| HinfI | GANTC | 4 cut(s) | 51, 317, 365, 395 |
| HphI | GGTGA | 3 cut(s) | 106, 215, 404 |
| Hpy166II | GTNNAC | 3 cut(s) | 172, 301, 538 |
| Hpy188I | TCNGA | 3 cut(s) | 56, 322, 484 |
| Hpy188III | TCNNGA | 2 cut(s) | 459, 519 |
| Hpy8I | GTNNAC | 3 cut(s) | 172, 301, 538 |
| HpyCH4V | TGCA | 3 cut(s) | 401, 500, 528 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 14, 110, 115, 205, 347 |
| HpyF3I | CTNAG | 1 cut(s) | 319 |
| Hsp92I | GRCGYC | 1 cut(s) | 77 |
| Hsp92II | CATG | 3 cut(s) | 307, 436, 508 |
| HspAI | GCGC | 1 cut(s) | 83 |
| Kzo9I | GATC | 2 cut(s) | 241, 479 |
| LmnI | GCTCC | 1 cut(s) | 109 |
| Lsp1109I | GCAGC | 2 cut(s) | 177, 353 |
| LweI | GCATC | 2 cut(s) | 123, 366 |
| MaeIII | GTNAC | 2 cut(s) | 37, 94 |
| MalI | GATC | 2 cut(s) | 243, 481 |
| MboI | GATC | 2 cut(s) | 241, 479 |
| MboII | GAAGA | 3 cut(s) | 71, 265, 295 |
| MluCI | AATT | 2 cut(s) | 329, 523 |
| MlyI | GAGTC | 3 cut(s) | 60, 311, 404 |
| MnlI | CCTC | 2 cut(s) | 132, 279 |
| MseI | TTAA | 1 cut(s) | 371 |
| MslI | CAYNNNNRTG | 3 cut(s) | 17, 71, 533 |
| MspA1I | CMGCKG | 1 cut(s) | 109 |
| MspR9I | CCNGG | 1 cut(s) | 138 |
| MvaI | CCWGG | 1 cut(s) | 138 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 14, 110, 115, 205, 347 |
| NdeI | CATATG | 1 cut(s) | 238 |
| NdeII | GATC | 2 cut(s) | 241, 479 |
| NlaIII | CATG | 3 cut(s) | 307, 436, 508 |
| NlaIV | GGNNCC | 3 cut(s) | 117, 351, 438 |
| NmuCI | GTSAC | 1 cut(s) | 94 |
| PaqCI | CACCTGC | 1 cut(s) | 109 |
| PfeI | GAWTC | 1 cut(s) | 365 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 143 |
| PkrI | GCNGC | 2 cut(s) | 167, 343 |
| PleI | GAGTC | 3 cut(s) | 59, 311, 403 |
| PpsI | GAGTC | 3 cut(s) | 59, 311, 403 |
| Psp6I | CCWGG | 1 cut(s) | 136 |
| PspGI | CCWGG | 1 cut(s) | 136 |
| PspN4I | GGNNCC | 3 cut(s) | 117, 351, 438 |
| PspPI | GGNCC | 1 cut(s) | 180 |
| RsaI | GTAC | 2 cut(s) | 214, 539 |
| RsaNI | GTAC | 2 cut(s) | 213, 538 |
| RseI | CAYNNNNRTG | 3 cut(s) | 17, 71, 533 |
| SalI | GTCGAC | 1 cut(s) | 299 |
| SaqAI | TTAA | 1 cut(s) | 371 |
| SatI | GCNGC | 2 cut(s) | 166, 342 |
| Sau3AI | GATC | 2 cut(s) | 241, 479 |
| Sau96I | GGNCC | 1 cut(s) | 180 |
| SchI | GAGTC | 3 cut(s) | 60, 311, 404 |
| ScrFI | CCNGG | 1 cut(s) | 138 |
| SetI | ASST | 5 cut(s) | 103, 124, 228, 338, 442 |
| SfaNI | GCATC | 2 cut(s) | 123, 366 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 17, 71, 533 |
| Sse9I | AATT | 2 cut(s) | 329, 523 |
| SsiI | CCGC | 3 cut(s) | 15, 107, 113 |
| StyD4I | CCNGG | 1 cut(s) | 136 |
| TaqI | TCGA | 2 cut(s) | 300, 460 |
| TasI | AATT | 2 cut(s) | 329, 523 |
| TfiI | GAWTC | 1 cut(s) | 365 |
| Tru1I | TTAA | 1 cut(s) | 371 |
| Tru9I | TTAA | 1 cut(s) | 371 |
| TseFI | GTSAC | 1 cut(s) | 94 |
| TseI | GCWGC | 2 cut(s) | 165, 341 |
| Tsp45I | GTSAC | 1 cut(s) | 94 |
| TspDTI | ATGAA | 3 cut(s) | 209, 324, 418 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 143 |
| XmiI | GTMKAC | 2 cut(s) | 171, 300 |