source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 267, 426 |
| AciI | CCGC | 1 cut(s) | 72 |
| AclWI | GGATC | 1 cut(s) | 229 |
| AcsI | RAATTY | 2 cut(s) | 114, 437 |
| AcuI | CTGAAG | 1 cut(s) | 98 |
| AcyI | GRCGYC | 2 cut(s) | 264, 423 |
| AfaI | GTAC | 2 cut(s) | 229, 303 |
| AgsI | TTSAA | 3 cut(s) | 50, 120, 379 |
| AluBI | AGCT | 2 cut(s) | 82, 331 |
| AluI | AGCT | 2 cut(s) | 82, 331 |
| Alw26I | GTCTC | 1 cut(s) | 255 |
| AlwI | GGATC | 1 cut(s) | 229 |
| ApeKI | GCWGC | 1 cut(s) | 82 |
| ApoI | RAATTY | 2 cut(s) | 114, 437 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 374 |
| AspS9I | GGNCC | 1 cut(s) | 151 |
| AsuHPI | GGTGA | 1 cut(s) | 182 |
| AvaII | GGWCC | 1 cut(s) | 151 |
| BbvI | GCAGC | 1 cut(s) | 69 |
| BcoDI | GTCTC | 1 cut(s) | 255 |
| BfmI | CTRYAG | 1 cut(s) | 354 |
| BisI | GCNGC | 1 cut(s) | 83 |
| BlsI | GCNGC | 1 cut(s) | 84 |
| Bme18I | GGWCC | 1 cut(s) | 151 |
| BmgT120I | GGNCC | 1 cut(s) | 151 |
| BmiI | GGNNCC | 1 cut(s) | 361 |
| BmrI | ACTGGG | 1 cut(s) | 132 |
| BmsI | GCATC | 1 cut(s) | 359 |
| BmuI | ACTGGG | 1 cut(s) | 132 |
| BpmI | CTGGAG | 1 cut(s) | 429 |
| Bpu10I | CCTNAGC | 1 cut(s) | 332 |
| BpuEI | CTTGAG | 1 cut(s) | 71 |
| BsaAI | YACGTR | 1 cut(s) | 227 |
| BsaHI | GRCGYC | 2 cut(s) | 264, 423 |
| BsaJI | CCNNGG | 1 cut(s) | 133 |
| Bse1I | ACTGG | 2 cut(s) | 73, 127 |
| BseDI | CCNNGG | 1 cut(s) | 133 |
| BseGI | GGATG | 1 cut(s) | 478 |
| BseNI | ACTGG | 2 cut(s) | 73, 127 |
| BseXI | GCAGC | 1 cut(s) | 69 |
| BsgI | GTGCAG | 1 cut(s) | 239 |
| BsmAI | GTCTC | 1 cut(s) | 255 |
| BsmBI | CGTCTC | 1 cut(s) | 255 |
| Bsp1407I | TGTACA | 1 cut(s) | 301 |
| Bsp143I | GATC | 2 cut(s) | 234, 427 |
| BspACI | CCGC | 1 cut(s) | 72 |
| BspLI | GGNNCC | 1 cut(s) | 361 |
| BspMAI | CTGCAG | 1 cut(s) | 358 |
| BspPI | GGATC | 1 cut(s) | 229 |
| BsrGI | TGTACA | 1 cut(s) | 301 |
| BsrI | ACTGG | 2 cut(s) | 73, 127 |
| BssECI | CCNNGG | 1 cut(s) | 133 |
| BssMI | GATC | 2 cut(s) | 234, 427 |
| BssNI | GRCGYC | 2 cut(s) | 264, 423 |
| Bst4CI | ACNGT | 1 cut(s) | 343 |
| Bst6I | CTCTTC | 1 cut(s) | 45 |
| BstACI | GRCGYC | 2 cut(s) | 264, 423 |
| BstAUI | TGTACA | 1 cut(s) | 301 |
| BstBAI | YACGTR | 1 cut(s) | 227 |
| BstC8I | GCNNGC | 3 cut(s) | 74, 222, 511 |
| BstDEI | CTNAG | 2 cut(s) | 332, 433 |
| BstDSI | CCRYGG | 1 cut(s) | 133 |
| BstEII | GGTNACC | 1 cut(s) | 100 |
| BstF5I | GGATG | 1 cut(s) | 478 |
| BstKTI | GATC | 2 cut(s) | 237, 430 |
| BstMAI | GTCTC | 1 cut(s) | 255 |
| BstMBI | GATC | 2 cut(s) | 234, 427 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 82, 88, 328 |
| BstPI | GGTNACC | 1 cut(s) | 100 |
| BstSFI | CTRYAG | 1 cut(s) | 354 |
| BstV1I | GCAGC | 1 cut(s) | 69 |
| BstX2I | RGATCY | 1 cut(s) | 234 |
| BstYI | RGATCY | 1 cut(s) | 234 |
| BtgI | CCRYGG | 1 cut(s) | 133 |
| BtsCI | GGATG | 1 cut(s) | 478 |
| Cac8I | GCNNGC | 3 cut(s) | 74, 222, 511 |
| Cfr13I | GGNCC | 1 cut(s) | 151 |
| Csp6I | GTAC | 2 cut(s) | 228, 302 |
| CviAII | CATG | 4 cut(s) | 106, 148, 406, 415 |
| CviJI | RGCY | 7 cut(s) | 76, 82, 331, 384, 502, 509, 513 |
| CviKI_1 | RGCY | 7 cut(s) | 76, 82, 331, 384, 502, 509, 513 |
| CviQI | GTAC | 2 cut(s) | 228, 302 |
| DdeI | CTNAG | 2 cut(s) | 332, 433 |
| DpnI | GATC | 2 cut(s) | 236, 429 |
| DpnII | GATC | 2 cut(s) | 234, 427 |
| Eam1104I | CTCTTC | 1 cut(s) | 45 |
| EarI | CTCTTC | 1 cut(s) | 45 |
| Eco47I | GGWCC | 1 cut(s) | 151 |
| Eco57I | CTGAAG | 1 cut(s) | 98 |
| Eco91I | GGTNACC | 1 cut(s) | 100 |
| EcoO65I | GGTNACC | 1 cut(s) | 100 |
| Esp3I | CGTCTC | 1 cut(s) | 255 |
| FaeI | CATG | 4 cut(s) | 109, 151, 409, 418 |
| FaiI | YATR | 8 cut(s) | 65, 107, 149, 200, 248, 407, 416, 464 |
| FatI | CATG | 4 cut(s) | 105, 147, 405, 414 |
| FauI | CCCGC | 1 cut(s) | 65 |
| Fnu4HI | GCNGC | 1 cut(s) | 83 |
| FokI | GGATG | 1 cut(s) | 485 |
| Fsp4HI | GCNGC | 1 cut(s) | 83 |
| GluI | GCNGC | 1 cut(s) | 83 |
| GsuI | CTGGAG | 1 cut(s) | 429 |
| Hin1I | GRCGYC | 2 cut(s) | 264, 423 |
| Hin1II | CATG | 4 cut(s) | 109, 151, 409, 418 |
| HindIII | AAGCTT | 1 cut(s) | 329 |
| HinfI | GANTC | 2 cut(s) | 109, 459 |
| HphI | GGTGA | 1 cut(s) | 182 |
| Hpy166II | GTNNAC | 3 cut(s) | 137, 173, 302 |
| Hpy188I | TCNGA | 1 cut(s) | 253 |
| Hpy188III | TCNNGA | 1 cut(s) | 446 |
| Hpy8I | GTNNAC | 3 cut(s) | 137, 173, 302 |
| Hpy99I | CGWCG | 3 cut(s) | 269, 428, 494 |
| HpyCH4III | ACNGT | 1 cut(s) | 343 |
| HpyCH4IV | ACGT | 3 cut(s) | 226, 264, 423 |
| HpyCH4V | TGCA | 4 cut(s) | 202, 220, 350, 356 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 82, 88, 328 |
| HpyF3I | CTNAG | 2 cut(s) | 332, 433 |
| HpySE526I | ACGT | 3 cut(s) | 226, 264, 423 |
| Hsp92I | GRCGYC | 2 cut(s) | 264, 423 |
| Hsp92II | CATG | 4 cut(s) | 109, 151, 409, 418 |
| Kzo9I | GATC | 2 cut(s) | 234, 427 |
| LpnPI | CCDG | 7 cut(s) | 54, 108, 206, 290, 342, 459, 495 |
| Lsp1109I | GCAGC | 1 cut(s) | 69 |
| LweI | GCATC | 1 cut(s) | 359 |
| MaeII | ACGT | 3 cut(s) | 226, 264, 423 |
| MaeIII | GTNAC | 1 cut(s) | 100 |
| MalI | GATC | 2 cut(s) | 236, 429 |
| MboI | GATC | 2 cut(s) | 234, 427 |
| MboII | GAAGA | 2 cut(s) | 62, 298 |
| MflI | RGATCY | 1 cut(s) | 234 |
| MluCI | AATT | 4 cut(s) | 114, 155, 345, 437 |
| MlyI | GAGTC | 1 cut(s) | 118 |
| MnlI | CCTC | 5 cut(s) | 46, 181, 185, 330, 453 |
| MroXI | GAANNNNTTC | 1 cut(s) | 374 |
| MseI | TTAA | 1 cut(s) | 158 |
| MslI | CAYNNNNRTG | 1 cut(s) | 215 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 82, 88, 328 |
| NdeII | GATC | 2 cut(s) | 234, 427 |
| NlaIII | CATG | 4 cut(s) | 109, 151, 409, 418 |
| NlaIV | GGNNCC | 1 cut(s) | 361 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 273 |
| PdmI | GAANNNNTTC | 1 cut(s) | 374 |
| PfeI | GAWTC | 1 cut(s) | 459 |
| PkrI | GCNGC | 1 cut(s) | 84 |
| PleI | GAGTC | 1 cut(s) | 117 |
| PpsI | GAGTC | 1 cut(s) | 117 |
| Ppu21I | YACGTR | 1 cut(s) | 227 |
| PspEI | GGTNACC | 1 cut(s) | 100 |
| PspN4I | GGNNCC | 1 cut(s) | 361 |
| PspPI | GGNCC | 1 cut(s) | 151 |
| PstI | CTGCAG | 1 cut(s) | 358 |
| PsuI | RGATCY | 1 cut(s) | 234 |
| RsaI | GTAC | 2 cut(s) | 229, 303 |
| RsaNI | GTAC | 2 cut(s) | 228, 302 |
| RseI | CAYNNNNRTG | 1 cut(s) | 215 |
| SaqAI | TTAA | 1 cut(s) | 158 |
| SatI | GCNGC | 1 cut(s) | 83 |
| Sau3AI | GATC | 2 cut(s) | 234, 427 |
| Sau96I | GGNCC | 1 cut(s) | 151 |
| SchI | GAGTC | 1 cut(s) | 118 |
| SetI | ASST | 7 cut(s) | 57, 84, 178, 229, 267, 333, 426 |
| SfaNI | GCATC | 1 cut(s) | 359 |
| SfcI | CTRYAG | 1 cut(s) | 354 |
| SinI | GGWCC | 1 cut(s) | 151 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 215 |
| SmlI | CTYRAG | 1 cut(s) | 86 |
| SmoI | CTYRAG | 1 cut(s) | 86 |
| Sse9I | AATT | 4 cut(s) | 114, 155, 345, 437 |
| SsiI | CCGC | 1 cut(s) | 72 |
| TaaI | ACNGT | 1 cut(s) | 343 |
| TaiI | ACGT | 3 cut(s) | 229, 267, 426 |
| TaqI | TCGA | 2 cut(s) | 267, 426 |
| TasI | AATT | 4 cut(s) | 114, 155, 345, 437 |
| TatI | WGTACW | 1 cut(s) | 301 |
| TfiI | GAWTC | 1 cut(s) | 459 |
| Tru1I | TTAA | 1 cut(s) | 158 |
| Tru9I | TTAA | 1 cut(s) | 158 |
| TseI | GCWGC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 4 cut(s) | 136, 199, 431, 451 |
| TspGWI | ACGGA | 1 cut(s) | 122 |
| VpaK11BI | GGWCC | 1 cut(s) | 151 |
| XapI | RAATTY | 2 cut(s) | 114, 437 |
| XmnI | GAANNNNTTC | 1 cut(s) | 374 |
| ZraI | GACGTC | 2 cut(s) | 265, 424 |