Belongs to the Casparian strip membrane proteins (CASP) family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Pectate_lyase_4 | PF00544 | 150 - 351 | 3.9e-21 | Pectate lyase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1489 |
| AarI | CACCTGC | 2 cut(s) | 23, 829 |
| Acc16I | TGCGCA | 1 cut(s) | 777 |
| Acc36I | ACCTGC | 2 cut(s) | 23, 829 |
| Acc65I | GGTACC | 1 cut(s) | 1298 |
| AccB1I | GGYRCC | 2 cut(s) | 491, 1298 |
| AccBSI | CCGCTC | 1 cut(s) | 406 |
| AccII | CGCG | 5 cut(s) | 165, 348, 489, 633, 1044 |
| AclWI | GGATC | 4 cut(s) | 385, 419, 692, 758 |
| AcoI | YGGCCR | 4 cut(s) | 286, 313, 484, 802 |
| AcsI | RAATTY | 1 cut(s) | 678 |
| AcuI | CTGAAG | 2 cut(s) | 132, 649 |
| AcvI | CACGTG | 1 cut(s) | 916 |
| AcyI | GRCGYC | 3 cut(s) | 294, 492, 729 |
| AdeI | CACNNNGTG | 3 cut(s) | 388, 919, 939 |
| AfaI | GTAC | 8 cut(s) | 132, 536, 707, 818, 950, 1001, 1154, 1300 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 159, 367, 368, 738, 787, 830, 865 |
| AgsI | TTSAA | 3 cut(s) | 472, 856, 1389 |
| AjiI | CACGTC | 3 cut(s) | 505, 568, 622 |
| AjnI | CCWGG | 2 cut(s) | 987, 1264 |
| AluBI | AGCT | 7 cut(s) | 42, 65, 116, 262, 442, 454, 468 |
| AluI | AGCT | 7 cut(s) | 42, 65, 116, 262, 442, 454, 468 |
| Alw21I | GWGCWC | 4 cut(s) | 44, 456, 1148, 1372 |
| Alw26I | GTCTC | 2 cut(s) | 544, 1196 |
| AlwI | GGATC | 4 cut(s) | 385, 419, 692, 758 |
| Ama87I | CYCGRG | 2 cut(s) | 902, 1172 |
| AoxI | GGCC | 6 cut(s) | 243, 286, 313, 484, 802, 1161 |
| ApeKI | GCWGC | 3 cut(s) | 228, 880, 963 |
| ApoI | RAATTY | 1 cut(s) | 678 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1328, 1360 |
| Asp718I | GGTACC | 1 cut(s) | 1298 |
| AspS9I | GGNCC | 5 cut(s) | 184, 243, 741, 1284, 1323 |
| AsuC2I | CCSGG | 4 cut(s) | 160, 369, 748, 832 |
| AvaI | CYCGRG | 2 cut(s) | 902, 1172 |
| AvaII | GGWCC | 4 cut(s) | 184, 741, 1284, 1323 |
| BaeGI | GKGCMC | 1 cut(s) | 374 |
| BanI | GGYRCC | 2 cut(s) | 491, 1298 |
| BanII | GRGCYC | 3 cut(s) | 44, 456, 1179 |
| BbrPI | CACGTG | 1 cut(s) | 916 |
| BbsI | GAAGAC | 1 cut(s) | 1216 |
| Bbv12I | GWGCWC | 4 cut(s) | 44, 456, 1148, 1372 |
| BbvI | GCAGC | 3 cut(s) | 215, 892, 975 |
| BccI | CCATC | 7 cut(s) | 218, 443, 485, 962, 1135, 1289, 1384 |
| BceAI | ACGGC | 5 cut(s) | 182, 371, 499, 661, 667 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 193, 227, 265, 299 |
| BciT130I | CCWGG | 2 cut(s) | 989, 1266 |
| BciVI | GTATCC | 1 cut(s) | 1262 |
| BcnI | CCSGG | 4 cut(s) | 160, 369, 748, 832 |
| BcoDI | GTCTC | 2 cut(s) | 544, 1196 |
| BfoI | RGCGCY | 5 cut(s) | 229, 495, 672, 875, 969 |
| BfuAI | ACCTGC | 2 cut(s) | 23, 829 |
| BfuI | GTATCC | 1 cut(s) | 1262 |
| BglII | AGATCT | 1 cut(s) | 318 |
| BmcAI | AGTACT | 1 cut(s) | 818 |
| Bme1390I | CCNGG | 6 cut(s) | 160, 369, 748, 832, 989, 1266 |
| Bme18I | GGWCC | 4 cut(s) | 184, 741, 1284, 1323 |
| BmeT110I | CYCGRG | 2 cut(s) | 902, 1172 |
| BmgBI | CACGTC | 3 cut(s) | 505, 568, 622 |
| BmgT120I | GGNCC | 5 cut(s) | 184, 243, 741, 1284, 1323 |
| BmiI | GGNNCC | 7 cut(s) | 235, 493, 742, 1114, 1285, 1300, 1324 |
| BmrFI | CCNGG | 6 cut(s) | 160, 369, 748, 832, 989, 1266 |
| BmrI | ACTGGG | 2 cut(s) | 250, 1144 |
| BmsI | GCATC | 5 cut(s) | 285, 509, 663, 783, 825 |
| BmuI | ACTGGG | 2 cut(s) | 250, 1144 |
| BpiI | GAAGAC | 1 cut(s) | 1216 |
| BpmI | CTGGAG | 3 cut(s) | 515, 592, 1102 |
| Bpu10I | CCTNAGC | 2 cut(s) | 61, 1158 |
| BpuEI | CTTGAG | 4 cut(s) | 58, 108, 164, 1150 |
| BpuMI | CCSGG | 4 cut(s) | 160, 369, 748, 832 |
| BsaAI | YACGTR | 1 cut(s) | 916 |
| BsaHI | GRCGYC | 3 cut(s) | 294, 492, 729 |
| BsaI | GGTCTC | 1 cut(s) | 1196 |
| BsaJI | CCNNGG | 8 cut(s) | 297, 487, 890, 988, 1026, 1235, 1264, 1444 |
| BsaWI | WCCGGW | 1 cut(s) | 1009 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 590, 620, 641, 671, 680, 710 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 159, 367, 368, 738, 787, 830, 865 |
| Bse118I | RCCGGY | 4 cut(s) | 509, 587, 1217, 1310 |
| Bse1I | ACTGG | 5 cut(s) | 245, 532, 1079, 1085, 1150 |
| Bse3DI | GCAATG | 1 cut(s) | 197 |
| BseBI | CCWGG | 2 cut(s) | 989, 1266 |
| BseDI | CCNNGG | 8 cut(s) | 297, 487, 890, 988, 1026, 1235, 1264, 1444 |
| BseGI | GGATG | 3 cut(s) | 524, 552, 840 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 159, 367, 368, 738, 787, 830, 865 |
| BseMI | GCAATG | 1 cut(s) | 197 |
| BseNI | ACTGG | 5 cut(s) | 245, 532, 1079, 1085, 1150 |
| BseRI | GAGGAG | 1 cut(s) | 328 |
| BseSI | GKGCMC | 1 cut(s) | 374 |
| BseX3I | CGGCCG | 1 cut(s) | 484 |
| BseXI | GCAGC | 3 cut(s) | 215, 892, 975 |
| BsgI | GTGCAG | 2 cut(s) | 899, 916 |
| Bsh1236I | CGCG | 5 cut(s) | 165, 348, 489, 633, 1044 |
| Bsh1285I | CGRYCG | 3 cut(s) | 253, 346, 487 |
| BshFI | GGCC | 6 cut(s) | 245, 288, 315, 486, 804, 1163 |
| BshNI | GGYRCC | 2 cut(s) | 491, 1298 |
| BsiEI | CGRYCG | 3 cut(s) | 253, 346, 487 |
| BsiHKAI | GWGCWC | 4 cut(s) | 44, 456, 1148, 1372 |
| BsiHKCI | CYCGRG | 2 cut(s) | 902, 1172 |
| BslFI | GGGAC | 4 cut(s) | 160, 1109, 1253, 1297 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 159, 367, 368, 738, 787, 830, 865 |
| BsmAI | GTCTC | 2 cut(s) | 544, 1196 |
| BsmBI | CGTCTC | 1 cut(s) | 544 |
| BsmFI | GGGAC | 4 cut(s) | 160, 1109, 1253, 1297 |
| BsmI | GAATGC | 1 cut(s) | 18 |
| BsnI | GGCC | 6 cut(s) | 245, 288, 315, 486, 804, 1163 |
| Bso31I | GGTCTC | 1 cut(s) | 1196 |
| BsoBI | CYCGRG | 2 cut(s) | 902, 1172 |
| Bsp1286I | GDGCHC | 6 cut(s) | 44, 374, 456, 1148, 1179, 1372 |
| Bsp143I | GATC | 5 cut(s) | 318, 390, 411, 684, 750 |
| Bsp19I | CCATGG | 2 cut(s) | 297, 1444 |
| BspANI | GGCC | 6 cut(s) | 245, 288, 315, 486, 804, 1163 |
| BspFNI | CGCG | 5 cut(s) | 165, 348, 489, 633, 1044 |
| BspLI | GGNNCC | 7 cut(s) | 235, 493, 742, 1114, 1285, 1300, 1324 |
| BspMI | ACCTGC | 2 cut(s) | 23, 829 |
| BspPI | GGATC | 4 cut(s) | 385, 419, 692, 758 |
| BspQI | GCTCTTC | 1 cut(s) | 1413 |
| BspT107I | GGYRCC | 2 cut(s) | 491, 1298 |
| BspTNI | GGTCTC | 1 cut(s) | 1196 |
| BsrBI | CCGCTC | 1 cut(s) | 406 |
| BsrDI | GCAATG | 1 cut(s) | 197 |
| BsrFI | RCCGGY | 4 cut(s) | 509, 587, 1217, 1310 |
| BsrI | ACTGG | 5 cut(s) | 245, 532, 1079, 1085, 1150 |
| BssAI | RCCGGY | 4 cut(s) | 509, 587, 1217, 1310 |
| BssECI | CCNNGG | 8 cut(s) | 297, 487, 890, 988, 1026, 1235, 1264, 1444 |
| BssMI | GATC | 5 cut(s) | 318, 390, 411, 684, 750 |
| BssNI | GRCGYC | 3 cut(s) | 294, 492, 729 |
| BssT1I | CCWWGG | 4 cut(s) | 297, 1026, 1235, 1444 |
| Bst2UI | CCWGG | 2 cut(s) | 989, 1266 |
| Bst4CI | ACNGT | 4 cut(s) | 1210, 1244, 1288, 1367 |
| Bst6I | CTCTTC | 2 cut(s) | 668, 1413 |
| BstACI | GRCGYC | 3 cut(s) | 294, 492, 729 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 886 |
| BstBAI | YACGTR | 1 cut(s) | 916 |
| BstDEI | CTNAG | 2 cut(s) | 61, 1158 |
| BstDSI | CCRYGG | 3 cut(s) | 297, 487, 1444 |
| BstF5I | GGATG | 3 cut(s) | 524, 552, 840 |
| BstFNI | CGCG | 5 cut(s) | 165, 348, 489, 633, 1044 |
| BstH2I | RGCGCY | 5 cut(s) | 229, 495, 672, 875, 969 |
| BstKTI | GATC | 5 cut(s) | 321, 393, 414, 687, 753 |
| BstMAI | GTCTC | 2 cut(s) | 544, 1196 |
| BstMBI | GATC | 5 cut(s) | 318, 390, 411, 684, 750 |
| BstMCI | CGRYCG | 3 cut(s) | 253, 346, 487 |
| BstNI | CCWGG | 2 cut(s) | 989, 1266 |
| BstSCI | CCNGG | 6 cut(s) | 158, 367, 746, 830, 987, 1264 |
| BstSLI | GKGCMC | 1 cut(s) | 374 |
| BstUI | CGCG | 5 cut(s) | 165, 348, 489, 633, 1044 |
| BstV1I | GCAGC | 3 cut(s) | 215, 892, 975 |
| BstV2I | GAAGAC | 1 cut(s) | 1216 |
| BstX2I | RGATCY | 1 cut(s) | 318 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1186 |
| BstYI | RGATCY | 1 cut(s) | 318 |
| BstZI | CGGCCG | 1 cut(s) | 484 |
| BsuI | GTATCC | 1 cut(s) | 1262 |
| BsuRI | GGCC | 6 cut(s) | 245, 288, 315, 486, 804, 1163 |
| BtgI | CCRYGG | 3 cut(s) | 297, 487, 1444 |
| BtrI | CACGTC | 3 cut(s) | 505, 568, 622 |
| BtsCI | GGATG | 3 cut(s) | 524, 552, 840 |
| BtsI | GCAGTG | 5 cut(s) | 574, 691, 944, 1002, 1321 |
| BtsIMutI | CAGTG | 6 cut(s) | 574, 691, 944, 1002, 1321, 1372 |
| BveI | ACCTGC | 2 cut(s) | 23, 829 |
| Cfr10I | RCCGGY | 4 cut(s) | 509, 587, 1217, 1310 |
| Cfr13I | GGNCC | 5 cut(s) | 184, 243, 741, 1284, 1323 |
| Cfr42I | CCGCGG | 1 cut(s) | 490 |
| CseI | GACGC | 3 cut(s) | 302, 487, 737 |
| Csp6I | GTAC | 8 cut(s) | 131, 535, 706, 817, 949, 1000, 1153, 1299 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1026, 1061 |
| CviAII | CATG | 4 cut(s) | 298, 430, 1141, 1445 |
| CviQI | GTAC | 8 cut(s) | 131, 535, 706, 817, 949, 1000, 1153, 1299 |
| DdeI | CTNAG | 2 cut(s) | 61, 1158 |
| DinI | GGCGCC | 1 cut(s) | 493 |
| DpnI | GATC | 5 cut(s) | 320, 392, 413, 686, 752 |
| DpnII | GATC | 5 cut(s) | 318, 390, 411, 684, 750 |
| DraIII | CACNNNGTG | 3 cut(s) | 388, 919, 939 |
| EaeI | YGGCCR | 4 cut(s) | 286, 313, 484, 802 |
| EagI | CGGCCG | 1 cut(s) | 484 |
| Eam1104I | CTCTTC | 2 cut(s) | 668, 1413 |
| EarI | CTCTTC | 2 cut(s) | 668, 1413 |
| EciI | GGCGGA | 4 cut(s) | 368, 412, 531, 1085 |
| Ecl136II | GAGCTC | 2 cut(s) | 42, 454 |
| EclXI | CGGCCG | 1 cut(s) | 484 |
| Eco130I | CCWWGG | 4 cut(s) | 297, 1026, 1235, 1444 |
| Eco147I | AGGCCT | 1 cut(s) | 1163 |
| Eco24I | GRGCYC | 3 cut(s) | 44, 456, 1179 |
| Eco31I | GGTCTC | 1 cut(s) | 1196 |
| Eco47I | GGWCC | 4 cut(s) | 184, 741, 1284, 1323 |
| Eco52I | CGGCCG | 1 cut(s) | 484 |
| Eco53kI | GAGCTC | 2 cut(s) | 42, 454 |
| Eco57I | CTGAAG | 2 cut(s) | 132, 649 |
| Eco72I | CACGTG | 1 cut(s) | 916 |
| Eco88I | CYCGRG | 2 cut(s) | 902, 1172 |
| EcoICRI | GAGCTC | 2 cut(s) | 42, 454 |
| EcoRII | CCWGG | 2 cut(s) | 987, 1264 |
| EcoT14I | CCWWGG | 4 cut(s) | 297, 1026, 1235, 1444 |
| EcoT22I | ATGCAT | 1 cut(s) | 524 |
| EcoT38I | GRGCYC | 3 cut(s) | 44, 456, 1179 |
| EgeI | GGCGCC | 1 cut(s) | 493 |
| EheI | GGCGCC | 1 cut(s) | 493 |
| ErhI | CCWWGG | 4 cut(s) | 297, 1026, 1235, 1444 |
| Esp3I | CGTCTC | 1 cut(s) | 544 |
| FaeI | CATG | 4 cut(s) | 301, 433, 1144, 1448 |
| FaqI | GGGAC | 4 cut(s) | 160, 1109, 1253, 1297 |
| FatI | CATG | 4 cut(s) | 297, 429, 1140, 1444 |
| FauI | CCCGC | 5 cut(s) | 361, 592, 626, 680, 1129 |
| FokI | GGATG | 3 cut(s) | 531, 539, 847 |
| FriOI | GRGCYC | 3 cut(s) | 44, 456, 1179 |
| FspI | TGCGCA | 1 cut(s) | 777 |
| GsuI | CTGGAG | 3 cut(s) | 515, 592, 1102 |
| HaeII | RGCGCY | 5 cut(s) | 229, 495, 672, 875, 969 |
| HaeIII | GGCC | 6 cut(s) | 245, 288, 315, 486, 804, 1163 |
| HgaI | GACGC | 3 cut(s) | 302, 487, 737 |
| Hin1I | GRCGYC | 3 cut(s) | 294, 492, 729 |
| Hin1II | CATG | 4 cut(s) | 301, 433, 1144, 1448 |
| HincII | GTYRAC | 1 cut(s) | 463 |
| HindII | GTYRAC | 1 cut(s) | 463 |
| HinfI | GANTC | 4 cut(s) | 141, 335, 720, 1256 |
| Hpy166II | GTNNAC | 8 cut(s) | 463, 502, 571, 744, 922, 1002, 1015, 1048 |
| Hpy188I | TCNGA | 2 cut(s) | 343, 643 |
| Hpy188III | TCNNGA | 6 cut(s) | 37, 125, 409, 472, 754, 1360 |
| Hpy8I | GTNNAC | 8 cut(s) | 463, 502, 571, 744, 922, 1002, 1015, 1048 |
| HpyAV | CCTTC | 2 cut(s) | 1052, 1126 |
| HpyCH4III | ACNGT | 4 cut(s) | 1210, 1244, 1288, 1367 |
| HpyCH4IV | ACGT | 7 cut(s) | 324, 504, 537, 567, 600, 621, 915 |
| HpyCH4V | TGCA | 6 cut(s) | 18, 522, 579, 838, 880, 897 |
| HpyF3I | CTNAG | 2 cut(s) | 61, 1158 |
| HpySE526I | ACGT | 7 cut(s) | 324, 504, 537, 567, 600, 621, 915 |
| Hsp92I | GRCGYC | 3 cut(s) | 294, 492, 729 |
| Hsp92II | CATG | 4 cut(s) | 301, 433, 1144, 1448 |
| KasI | GGCGCC | 1 cut(s) | 491 |
| KpnI | GGTACC | 1 cut(s) | 1302 |
| KroI | GCCGGC | 1 cut(s) | 587 |
| KroNI | GCCGGC | 1 cut(s) | 589 |
| KspI | CCGCGG | 1 cut(s) | 490 |
| Kzo9I | GATC | 5 cut(s) | 318, 390, 411, 684, 750 |
| LguI | GCTCTTC | 1 cut(s) | 1413 |
| LmnI | GCTCC | 5 cut(s) | 239, 701, 1012, 1112, 1251 |
| Lsp1109I | GCAGC | 3 cut(s) | 215, 892, 975 |
| LweI | GCATC | 5 cut(s) | 285, 509, 663, 783, 825 |
| MaeII | ACGT | 7 cut(s) | 324, 504, 537, 567, 600, 621, 915 |
| MaeIII | GTNAC | 8 cut(s) | 328, 505, 841, 1033, 1210, 1288, 1334, 1432 |
| MalI | GATC | 5 cut(s) | 320, 392, 413, 686, 752 |
| MbiI | CCGCTC | 1 cut(s) | 406 |
| MboI | GATC | 5 cut(s) | 318, 390, 411, 684, 750 |
| MboII | GAAGA | 6 cut(s) | 409, 655, 1111, 1216, 1377, 1400 |
| MflI | RGATCY | 1 cut(s) | 318 |
| MhlI | GDGCHC | 6 cut(s) | 44, 374, 456, 1148, 1179, 1372 |
| MluCI | AATT | 3 cut(s) | 678, 1413, 1422 |
| Mly113I | GGCGCC | 1 cut(s) | 492 |
| MlyI | GAGTC | 3 cut(s) | 150, 329, 714 |
| MmeI | TCCRAC | 5 cut(s) | 261, 366, 567, 666, 786 |
| Mph1103I | ATGCAT | 1 cut(s) | 524 |
| MroNI | GCCGGC | 1 cut(s) | 587 |
| MseI | TTAA | 4 cut(s) | 26, 981, 1421, 1475 |
| MslI | CAYNNNNRTG | 2 cut(s) | 833, 1449 |
| MspA1I | CMGCKG | 3 cut(s) | 489, 1275, 1329 |
| MspR9I | CCNGG | 6 cut(s) | 160, 369, 748, 832, 989, 1266 |
| Mva1269I | GAATGC | 1 cut(s) | 18 |
| MvaI | CCWGG | 2 cut(s) | 989, 1266 |
| MvnI | CGCG | 5 cut(s) | 165, 348, 489, 633, 1044 |
| NaeI | GCCGGC | 1 cut(s) | 589 |
| NarI | GGCGCC | 1 cut(s) | 492 |
| NciI | CCSGG | 4 cut(s) | 160, 369, 748, 832 |
| NcoI | CCATGG | 2 cut(s) | 297, 1444 |
| NdeII | GATC | 5 cut(s) | 318, 390, 411, 684, 750 |
| NgoMIV | GCCGGC | 1 cut(s) | 587 |
| NlaIII | CATG | 4 cut(s) | 301, 433, 1144, 1448 |
| NlaIV | GGNNCC | 7 cut(s) | 235, 493, 742, 1114, 1285, 1300, 1324 |
| NmeAIII | GCCGAG | 1 cut(s) | 780 |
| NmuCI | GTSAC | 6 cut(s) | 328, 505, 841, 1033, 1210, 1334 |
| NsbI | TGCGCA | 1 cut(s) | 777 |
| NsiI | ATGCAT | 1 cut(s) | 524 |
| PaeR7I | CTCGAG | 1 cut(s) | 1172 |
| PaqCI | CACCTGC | 2 cut(s) | 23, 829 |
| PceI | AGGCCT | 1 cut(s) | 1163 |
| PciSI | GCTCTTC | 1 cut(s) | 1413 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 330, 456, 723, 807 |
| PctI | GAATGC | 1 cut(s) | 18 |
| PdiI | GCCGGC | 1 cut(s) | 589 |
| PfeI | GAWTC | 1 cut(s) | 1256 |
| PleI | GAGTC | 3 cut(s) | 149, 329, 714 |
| PluTI | GGCGCC | 1 cut(s) | 495 |
| PmaCI | CACGTG | 1 cut(s) | 916 |
| PmlI | CACGTG | 1 cut(s) | 916 |
| PpsI | GAGTC | 3 cut(s) | 149, 329, 714 |
| Ppu21I | YACGTR | 1 cut(s) | 916 |
| PsiI | TTATAA | 1 cut(s) | 1489 |
| Psp124BI | GAGCTC | 2 cut(s) | 44, 456 |
| Psp6I | CCWGG | 2 cut(s) | 987, 1264 |
| PspCI | CACGTG | 1 cut(s) | 916 |
| PspGI | CCWGG | 2 cut(s) | 987, 1264 |
| PspN4I | GGNNCC | 7 cut(s) | 235, 493, 742, 1114, 1285, 1300, 1324 |
| PspPI | GGNCC | 5 cut(s) | 184, 243, 741, 1284, 1323 |
| PspXI | VCTCGAGB | 1 cut(s) | 1172 |
| PsuI | RGATCY | 1 cut(s) | 318 |
| RsaI | GTAC | 8 cut(s) | 132, 536, 707, 818, 950, 1001, 1154, 1300 |
| RsaNI | GTAC | 8 cut(s) | 131, 535, 706, 817, 949, 1000, 1153, 1299 |
| RseI | CAYNNNNRTG | 2 cut(s) | 833, 1449 |
| SacI | GAGCTC | 2 cut(s) | 44, 456 |
| SacII | CCGCGG | 1 cut(s) | 490 |
| SapI | GCTCTTC | 1 cut(s) | 1413 |
| SaqAI | TTAA | 4 cut(s) | 26, 981, 1421, 1475 |
| Sau3AI | GATC | 5 cut(s) | 318, 390, 411, 684, 750 |
| Sau96I | GGNCC | 5 cut(s) | 184, 243, 741, 1284, 1323 |
| ScaI | AGTACT | 1 cut(s) | 818 |
| SchI | GAGTC | 3 cut(s) | 150, 329, 714 |
| ScrFI | CCNGG | 6 cut(s) | 160, 369, 748, 832, 989, 1266 |
| SduI | GDGCHC | 6 cut(s) | 44, 374, 456, 1148, 1179, 1372 |
| SfaNI | GCATC | 5 cut(s) | 285, 509, 663, 783, 825 |
| SfoI | GGCGCC | 1 cut(s) | 493 |
| Sfr274I | CTCGAG | 1 cut(s) | 1172 |
| Sfr303I | CCGCGG | 1 cut(s) | 490 |
| SgrAI | CRCCGGYG | 2 cut(s) | 509, 1217 |
| SgrBI | CCGCGG | 1 cut(s) | 490 |
| SinI | GGWCC | 4 cut(s) | 184, 741, 1284, 1323 |
| SlaI | CTCGAG | 1 cut(s) | 1172 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 833, 1449 |
| SmlI | CTYRAG | 5 cut(s) | 37, 123, 179, 1165, 1172 |
| SmoI | CTYRAG | 5 cut(s) | 37, 123, 179, 1165, 1172 |
| Sse9I | AATT | 3 cut(s) | 678, 1413, 1422 |
| SseBI | AGGCCT | 1 cut(s) | 1163 |
| SspDI | GGCGCC | 1 cut(s) | 491 |
| SstI | GAGCTC | 2 cut(s) | 44, 456 |
| StuI | AGGCCT | 1 cut(s) | 1163 |
| StyD4I | CCNGG | 6 cut(s) | 158, 367, 746, 830, 987, 1264 |
| StyI | CCWWGG | 4 cut(s) | 297, 1026, 1235, 1444 |
| TaaI | ACNGT | 4 cut(s) | 1210, 1244, 1288, 1367 |
| TaiI | ACGT | 7 cut(s) | 327, 507, 540, 570, 603, 624, 918 |
| TaqI | TCGA | 6 cut(s) | 213, 450, 480, 687, 726, 1173 |
| TasI | AATT | 3 cut(s) | 678, 1413, 1422 |
| TatI | WGTACW | 2 cut(s) | 130, 816 |
| TfiI | GAWTC | 1 cut(s) | 1256 |
| Tru1I | TTAA | 4 cut(s) | 26, 981, 1421, 1475 |
| Tru9I | TTAA | 4 cut(s) | 26, 981, 1421, 1475 |
| TscAI | CASTG | 6 cut(s) | 581, 698, 944, 1009, 1321, 1372 |
| TseFI | GTSAC | 6 cut(s) | 328, 505, 841, 1033, 1210, 1334 |
| TseI | GCWGC | 3 cut(s) | 228, 880, 963 |
| Tsp45I | GTSAC | 6 cut(s) | 328, 505, 841, 1033, 1210, 1334 |
| TspGWI | ACGGA | 2 cut(s) | 732, 1103 |
| TspRI | CASTG | 6 cut(s) | 581, 698, 944, 1009, 1321, 1372 |
| VpaK11BI | GGWCC | 4 cut(s) | 184, 741, 1284, 1323 |
| XapI | RAATTY | 1 cut(s) | 678 |
| XhoI | CTCGAG | 1 cut(s) | 1172 |
| ZrmI | AGTACT | 1 cut(s) | 818 |
| Zsp2I | ATGCAT | 1 cut(s) | 524 |