source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 933 |
| AccB1I | GGYRCC | 1 cut(s) | 445 |
| AccII | CGCG | 1 cut(s) | 552 |
| AccIII | TCCGGA | 1 cut(s) | 1140 |
| AciI | CCGC | 1 cut(s) | 1020 |
| AclWI | GGATC | 8 cut(s) | 59, 266, 351, 824, 857, 870, 1055, 1068 |
| AcsI | RAATTY | 2 cut(s) | 927, 978 |
| AcuI | CTGAAG | 2 cut(s) | 591, 743 |
| AcyI | GRCGYC | 1 cut(s) | 446 |
| AfaI | GTAC | 1 cut(s) | 638 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 115, 390, 872, 1070, 1174 |
| AgsI | TTSAA | 5 cut(s) | 73, 115, 140, 435, 1172 |
| AjnI | CCWGG | 3 cut(s) | 22, 802, 871 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 768, 800 |
| AluBI | AGCT | 6 cut(s) | 99, 247, 336, 611, 714, 728 |
| AluI | AGCT | 6 cut(s) | 99, 247, 336, 611, 714, 728 |
| Alw21I | GWGCWC | 1 cut(s) | 674 |
| Alw26I | GTCTC | 1 cut(s) | 140 |
| Alw44I | GTGCAC | 1 cut(s) | 670 |
| AlwI | GGATC | 8 cut(s) | 59, 266, 351, 824, 857, 870, 1055, 1068 |
| Ama87I | CYCGRG | 1 cut(s) | 14 |
| Aor13HI | TCCGGA | 1 cut(s) | 1140 |
| AoxI | GGCC | 4 cut(s) | 10, 805, 897, 955 |
| ApaI | GGGCCC | 1 cut(s) | 14 |
| ApaLI | GTGCAC | 1 cut(s) | 670 |
| ApeKI | GCWGC | 1 cut(s) | 336 |
| ApoI | RAATTY | 2 cut(s) | 927, 978 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 454, 486 |
| AseI | ATTAAT | 1 cut(s) | 257 |
| AspLEI | GCGC | 3 cut(s) | 448, 552, 1038 |
| AspS9I | GGNCC | 2 cut(s) | 10, 11 |
| AsuHPI | GGTGA | 3 cut(s) | 48, 359, 785 |
| AvaI | CYCGRG | 1 cut(s) | 14 |
| AxyI | CCTNAGG | 1 cut(s) | 498 |
| BaeGI | GKGCMC | 2 cut(s) | 14, 674 |
| BamHI | GGATCC | 2 cut(s) | 862, 1060 |
| BanI | GGYRCC | 1 cut(s) | 445 |
| BanII | GRGCYC | 1 cut(s) | 14 |
| BauI | CACGAG | 1 cut(s) | 491 |
| BbsI | GAAGAC | 1 cut(s) | 770 |
| Bbv12I | GWGCWC | 1 cut(s) | 674 |
| BbvI | GCAGC | 1 cut(s) | 323 |
| BccI | CCATC | 3 cut(s) | 151, 184, 457 |
| BceAI | ACGGC | 2 cut(s) | 792, 942 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 475, 509 |
| BciT130I | CCWGG | 3 cut(s) | 24, 804, 873 |
| BcoDI | GTCTC | 1 cut(s) | 140 |
| BfaI | CTAG | 4 cut(s) | 150, 198, 291, 545 |
| BfmI | CTRYAG | 2 cut(s) | 612, 699 |
| BfoI | RGCGCY | 1 cut(s) | 449 |
| BisI | GCNGC | 1 cut(s) | 337 |
| BlsI | GCNGC | 1 cut(s) | 338 |
| Bme1390I | CCNGG | 3 cut(s) | 24, 804, 873 |
| BmeT110I | CYCGRG | 1 cut(s) | 14 |
| BmgT120I | GGNCC | 2 cut(s) | 10, 11 |
| BmiI | GGNNCC | 5 cut(s) | 12, 13, 447, 864, 1062 |
| BmrFI | CCNGG | 3 cut(s) | 24, 804, 873 |
| BmsI | GCATC | 4 cut(s) | 28, 758, 780, 1023 |
| BpiI | GAAGAC | 1 cut(s) | 770 |
| Bpu10I | CCTNAGC | 2 cut(s) | 165, 340 |
| BsaAI | YACGTR | 1 cut(s) | 1030 |
| BsaHI | GRCGYC | 1 cut(s) | 446 |
| BsaJI | CCNNGG | 1 cut(s) | 1068 |
| BsaWI | WCCGGW | 1 cut(s) | 1140 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 336, 366, 600, 630 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 115, 390, 872, 1070, 1174 |
| Bse1I | ACTGG | 2 cut(s) | 747, 1179 |
| Bse21I | CCTNAGG | 1 cut(s) | 498 |
| Bse3DI | GCAATG | 2 cut(s) | 618, 1015 |
| BseAI | TCCGGA | 1 cut(s) | 1140 |
| BseBI | CCWGG | 3 cut(s) | 24, 804, 873 |
| BseDI | CCNNGG | 1 cut(s) | 1068 |
| BseGI | GGATG | 3 cut(s) | 19, 195, 379 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 115, 390, 872, 1070, 1174 |
| BseMI | GCAATG | 2 cut(s) | 618, 1015 |
| BseMII | CTCAG | 4 cut(s) | 213, 230, 354, 512 |
| BseNI | ACTGG | 2 cut(s) | 747, 1179 |
| BseRI | GAGGAG | 1 cut(s) | 51 |
| BseSI | GKGCMC | 2 cut(s) | 14, 674 |
| BseXI | GCAGC | 1 cut(s) | 323 |
| BseYI | CCCAGC | 3 cut(s) | 47, 360, 1004 |
| BsgI | GTGCAG | 1 cut(s) | 497 |
| Bsh1236I | CGCG | 1 cut(s) | 552 |
| Bsh1285I | CGRYCG | 1 cut(s) | 109 |
| BshFI | GGCC | 4 cut(s) | 12, 807, 899, 957 |
| BshNI | GGYRCC | 1 cut(s) | 445 |
| BsiEI | CGRYCG | 1 cut(s) | 109 |
| BsiHKAI | GWGCWC | 1 cut(s) | 674 |
| BsiHKCI | CYCGRG | 1 cut(s) | 14 |
| BsiSI | CCGG | 1 cut(s) | 1141 |
| BslFI | GGGAC | 1 cut(s) | 291 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 115, 390, 872, 1070, 1174 |
| BsmAI | GTCTC | 1 cut(s) | 140 |
| BsmFI | GGGAC | 1 cut(s) | 291 |
| BsmI | GAATGC | 1 cut(s) | 1022 |
| BsnI | GGCC | 4 cut(s) | 12, 807, 899, 957 |
| BsoBI | CYCGRG | 1 cut(s) | 14 |
| Bsp120I | GGGCCC | 1 cut(s) | 10 |
| Bsp1286I | GDGCHC | 2 cut(s) | 14, 674 |
| Bsp13I | TCCGGA | 1 cut(s) | 1140 |
| Bsp143I | GATC | 8 cut(s) | 51, 271, 356, 734, 816, 862, 950, 1060 |
| BspACI | CCGC | 1 cut(s) | 1020 |
| BspANI | GGCC | 4 cut(s) | 12, 807, 899, 957 |
| BspCNI | CTCAG | 4 cut(s) | 214, 231, 353, 511 |
| BspEI | TCCGGA | 1 cut(s) | 1140 |
| BspFNI | CGCG | 1 cut(s) | 552 |
| BspHI | TCATGA | 1 cut(s) | 1041 |
| BspLI | GGNNCC | 5 cut(s) | 12, 13, 447, 864, 1062 |
| BspPI | GGATC | 8 cut(s) | 59, 266, 351, 824, 857, 870, 1055, 1068 |
| BspQI | GCTCTTC | 1 cut(s) | 1101 |
| BspT107I | GGYRCC | 1 cut(s) | 445 |
| BsrDI | GCAATG | 2 cut(s) | 618, 1015 |
| BsrI | ACTGG | 2 cut(s) | 747, 1179 |
| BssECI | CCNNGG | 1 cut(s) | 1068 |
| BssMI | GATC | 8 cut(s) | 51, 271, 356, 734, 816, 862, 950, 1060 |
| BssNI | GRCGYC | 1 cut(s) | 446 |
| BssSI | CACGAG | 1 cut(s) | 491 |
| BssT1I | CCWWGG | 1 cut(s) | 1068 |
| Bst2BI | CACGAG | 1 cut(s) | 491 |
| Bst2UI | CCWGG | 3 cut(s) | 24, 804, 873 |
| Bst4CI | ACNGT | 7 cut(s) | 110, 122, 616, 703, 773, 850, 917 |
| Bst6I | CTCTTC | 4 cut(s) | 138, 171, 888, 1101 |
| BstACI | GRCGYC | 1 cut(s) | 446 |
| BstBAI | YACGTR | 1 cut(s) | 1030 |
| BstC8I | GCNNGC | 4 cut(s) | 281, 334, 592, 712 |
| BstDEI | CTNAG | 5 cut(s) | 165, 222, 239, 340, 498 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 870 |
| BstF5I | GGATG | 3 cut(s) | 19, 195, 379 |
| BstFNI | CGCG | 1 cut(s) | 552 |
| BstH2I | RGCGCY | 1 cut(s) | 449 |
| BstHHI | GCGC | 3 cut(s) | 448, 552, 1038 |
| BstKTI | GATC | 8 cut(s) | 54, 274, 359, 737, 819, 865, 953, 1063 |
| BstMAI | GTCTC | 1 cut(s) | 140 |
| BstMBI | GATC | 8 cut(s) | 51, 271, 356, 734, 816, 862, 950, 1060 |
| BstMCI | CGRYCG | 1 cut(s) | 109 |
| BstNI | CCWGG | 3 cut(s) | 24, 804, 873 |
| BstNSI | RCATGY | 1 cut(s) | 283 |
| BstSCI | CCNGG | 3 cut(s) | 22, 802, 871 |
| BstSFI | CTRYAG | 2 cut(s) | 612, 699 |
| BstSLI | GKGCMC | 2 cut(s) | 14, 674 |
| BstUI | CGCG | 1 cut(s) | 552 |
| BstV1I | GCAGC | 1 cut(s) | 323 |
| BstV2I | GAAGAC | 1 cut(s) | 770 |
| BstX2I | RGATCY | 5 cut(s) | 51, 356, 816, 862, 1060 |
| BstYI | RGATCY | 5 cut(s) | 51, 356, 816, 862, 1060 |
| Bsu36I | CCTNAGG | 1 cut(s) | 498 |
| BsuRI | GGCC | 4 cut(s) | 12, 807, 899, 957 |
| BtsCI | GGATG | 3 cut(s) | 19, 195, 379 |
| BtsIMutI | CAGTG | 1 cut(s) | 922 |
| Cac8I | GCNNGC | 4 cut(s) | 281, 334, 592, 712 |
| CciI | TCATGA | 1 cut(s) | 1041 |
| CfoI | GCGC | 3 cut(s) | 448, 552, 1038 |
| Cfr13I | GGNCC | 2 cut(s) | 10, 11 |
| Csp6I | GTAC | 1 cut(s) | 637 |
| CviAII | CATG | 4 cut(s) | 280, 595, 1042, 1057 |
| CviQI | GTAC | 1 cut(s) | 637 |
| DdeI | CTNAG | 5 cut(s) | 165, 222, 239, 340, 498 |
| DinI | GGCGCC | 1 cut(s) | 447 |
| DpnI | GATC | 8 cut(s) | 53, 273, 358, 736, 818, 864, 952, 1062 |
| DpnII | GATC | 8 cut(s) | 51, 271, 356, 734, 816, 862, 950, 1060 |
| DraI | TTTAAA | 1 cut(s) | 654 |
| Eam1104I | CTCTTC | 4 cut(s) | 138, 171, 888, 1101 |
| EarI | CTCTTC | 4 cut(s) | 138, 171, 888, 1101 |
| Eco130I | CCWWGG | 1 cut(s) | 1068 |
| Eco24I | GRGCYC | 1 cut(s) | 14 |
| Eco32I | GATATC | 1 cut(s) | 1051 |
| Eco57I | CTGAAG | 2 cut(s) | 591, 743 |
| Eco81I | CCTNAGG | 1 cut(s) | 498 |
| Eco88I | CYCGRG | 1 cut(s) | 14 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 870 |
| EcoO109I | RGGNCCY | 1 cut(s) | 11 |
| EcoRII | CCWGG | 3 cut(s) | 22, 802, 871 |
| EcoRV | GATATC | 1 cut(s) | 1051 |
| EcoT14I | CCWWGG | 1 cut(s) | 1068 |
| EcoT38I | GRGCYC | 1 cut(s) | 14 |
| EgeI | GGCGCC | 1 cut(s) | 447 |
| EheI | GGCGCC | 1 cut(s) | 447 |
| ErhI | CCWWGG | 1 cut(s) | 1068 |
| FaeI | CATG | 4 cut(s) | 283, 598, 1045, 1060 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 521, 553 |
| FaqI | GGGAC | 1 cut(s) | 291 |
| FatI | CATG | 4 cut(s) | 279, 594, 1041, 1056 |
| FauI | CCCGC | 1 cut(s) | 1013 |
| Fnu4HI | GCNGC | 1 cut(s) | 337 |
| FokI | GGATG | 3 cut(s) | 6, 202, 386 |
| FriOI | GRGCYC | 1 cut(s) | 14 |
| Fsp4HI | GCNGC | 1 cut(s) | 337 |
| FspBI | CTAG | 4 cut(s) | 150, 198, 291, 545 |
| GlaI | GCGC | 3 cut(s) | 447, 551, 1037 |
| GluI | GCNGC | 1 cut(s) | 337 |
| GsaI | CCCAGC | 3 cut(s) | 51, 364, 1008 |
| HaeII | RGCGCY | 1 cut(s) | 449 |
| HaeIII | GGCC | 4 cut(s) | 12, 807, 899, 957 |
| HapII | CCGG | 1 cut(s) | 1141 |
| HhaI | GCGC | 3 cut(s) | 448, 552, 1038 |
| Hin1I | GRCGYC | 1 cut(s) | 446 |
| Hin1II | CATG | 4 cut(s) | 283, 598, 1045, 1060 |
| Hin6I | GCGC | 3 cut(s) | 446, 550, 1036 |
| HinP1I | GCGC | 3 cut(s) | 446, 550, 1036 |
| HinfI | GANTC | 2 cut(s) | 30, 241 |
| HpaII | CCGG | 1 cut(s) | 1141 |
| HphI | GGTGA | 3 cut(s) | 48, 359, 785 |
| Hpy166II | GTNNAC | 3 cut(s) | 672, 776, 913 |
| Hpy188I | TCNGA | 3 cut(s) | 35, 325, 762 |
| Hpy8I | GTNNAC | 3 cut(s) | 672, 776, 913 |
| HpyAV | CCTTC | 7 cut(s) | 109, 146, 568, 1039, 1074, 1087, 1178 |
| HpyCH4III | ACNGT | 7 cut(s) | 110, 122, 616, 703, 773, 850, 917 |
| HpyCH4IV | ACGT | 1 cut(s) | 1029 |
| HpyCH4V | TGCA | 3 cut(s) | 514, 590, 672 |
| HpyF3I | CTNAG | 5 cut(s) | 165, 222, 239, 340, 498 |
| HpySE526I | ACGT | 1 cut(s) | 1029 |
| Hsp92I | GRCGYC | 1 cut(s) | 446 |
| Hsp92II | CATG | 4 cut(s) | 283, 598, 1045, 1060 |
| HspAI | GCGC | 3 cut(s) | 446, 550, 1036 |
| KasI | GGCGCC | 1 cut(s) | 445 |
| Kpn2I | TCCGGA | 1 cut(s) | 1140 |
| Kzo9I | GATC | 8 cut(s) | 51, 271, 356, 734, 816, 862, 950, 1060 |
| LguI | GCTCTTC | 1 cut(s) | 1101 |
| LmnI | GCTCC | 2 cut(s) | 229, 608 |
| Lsp1109I | GCAGC | 1 cut(s) | 323 |
| LweI | GCATC | 4 cut(s) | 28, 758, 780, 1023 |
| MaeI | CTAG | 4 cut(s) | 150, 198, 291, 545 |
| MaeII | ACGT | 1 cut(s) | 1029 |
| MalI | GATC | 8 cut(s) | 53, 273, 358, 736, 818, 864, 952, 1062 |
| MboI | GATC | 8 cut(s) | 51, 271, 356, 734, 816, 862, 950, 1060 |
| MboII | GAAGA | 9 cut(s) | 155, 188, 416, 444, 584, 775, 905, 1093, 1118 |
| MfeI | CAATTG | 3 cut(s) | 209, 522, 1128 |
| MflI | RGATCY | 5 cut(s) | 51, 356, 816, 862, 1060 |
| MhlI | GDGCHC | 2 cut(s) | 14, 674 |
| Mly113I | GGCGCC | 1 cut(s) | 446 |
| MlyI | GAGTC | 2 cut(s) | 39, 250 |
| MroI | TCCGGA | 1 cut(s) | 1140 |
| MseI | TTAA | 6 cut(s) | 125, 185, 257, 285, 414, 653 |
| MspI | CCGG | 1 cut(s) | 1141 |
| MspR9I | CCNGG | 3 cut(s) | 24, 804, 873 |
| MunI | CAATTG | 3 cut(s) | 209, 522, 1128 |
| Mva1269I | GAATGC | 1 cut(s) | 1022 |
| MvaI | CCWGG | 3 cut(s) | 24, 804, 873 |
| MvnI | CGCG | 1 cut(s) | 552 |
| NarI | GGCGCC | 1 cut(s) | 446 |
| NdeII | GATC | 8 cut(s) | 51, 271, 356, 734, 816, 862, 950, 1060 |
| NlaIII | CATG | 4 cut(s) | 283, 598, 1045, 1060 |
| NlaIV | GGNNCC | 5 cut(s) | 12, 13, 447, 864, 1062 |
| NspI | RCATGY | 1 cut(s) | 283 |
| PaeI | GCATGC | 1 cut(s) | 283 |
| PagI | TCATGA | 1 cut(s) | 1041 |
| PciSI | GCTCTTC | 1 cut(s) | 1101 |
| PctI | GAATGC | 1 cut(s) | 1022 |
| PkrI | GCNGC | 1 cut(s) | 338 |
| PleI | GAGTC | 2 cut(s) | 38, 249 |
| PluTI | GGCGCC | 1 cut(s) | 449 |
| PpsI | GAGTC | 2 cut(s) | 38, 249 |
| Ppu21I | YACGTR | 1 cut(s) | 1030 |
| PshBI | ATTAAT | 1 cut(s) | 257 |
| PsiI | TTATAA | 1 cut(s) | 933 |
| Psp6I | CCWGG | 3 cut(s) | 22, 802, 871 |
| PspFI | CCCAGC | 3 cut(s) | 47, 360, 1004 |
| PspGI | CCWGG | 3 cut(s) | 22, 802, 871 |
| PspN4I | GGNNCC | 5 cut(s) | 12, 13, 447, 864, 1062 |
| PspOMI | GGGCCC | 1 cut(s) | 10 |
| PspPI | GGNCC | 2 cut(s) | 10, 11 |
| PsuI | RGATCY | 5 cut(s) | 51, 356, 816, 862, 1060 |
| RsaI | GTAC | 1 cut(s) | 638 |
| RsaNI | GTAC | 1 cut(s) | 637 |
| SapI | GCTCTTC | 1 cut(s) | 1101 |
| SaqAI | TTAA | 6 cut(s) | 125, 185, 257, 285, 414, 653 |
| SatI | GCNGC | 1 cut(s) | 337 |
| Sau3AI | GATC | 8 cut(s) | 51, 271, 356, 734, 816, 862, 950, 1060 |
| Sau96I | GGNCC | 2 cut(s) | 10, 11 |
| SchI | GAGTC | 2 cut(s) | 39, 250 |
| ScrFI | CCNGG | 3 cut(s) | 24, 804, 873 |
| SduI | GDGCHC | 2 cut(s) | 14, 674 |
| SfaNI | GCATC | 4 cut(s) | 28, 758, 780, 1023 |
| SfcI | CTRYAG | 2 cut(s) | 612, 699 |
| SfoI | GGCGCC | 1 cut(s) | 447 |
| SphI | GCATGC | 1 cut(s) | 283 |
| SsiI | CCGC | 1 cut(s) | 1020 |
| SspDI | GGCGCC | 1 cut(s) | 445 |
| SspI | AATATT | 1 cut(s) | 68 |
| SspMI | CTAG | 4 cut(s) | 150, 198, 291, 545 |
| StyD4I | CCNGG | 3 cut(s) | 22, 802, 871 |
| StyI | CCWWGG | 1 cut(s) | 1068 |
| TaaI | ACNGT | 7 cut(s) | 110, 122, 616, 703, 773, 850, 917 |
| TaiI | ACGT | 1 cut(s) | 1032 |
| TaqI | TCGA | 3 cut(s) | 690, 888, 1014 |
| Tru1I | TTAA | 6 cut(s) | 125, 185, 257, 285, 414, 653 |
| Tru9I | TTAA | 6 cut(s) | 125, 185, 257, 285, 414, 653 |
| TscAI | CASTG | 1 cut(s) | 922 |
| TseI | GCWGC | 1 cut(s) | 336 |
| TspDTI | ATGAA | 5 cut(s) | 906, 1030, 1058, 1149, 1161 |
| TspRI | CASTG | 1 cut(s) | 922 |
| VneI | GTGCAC | 1 cut(s) | 670 |
| VspI | ATTAAT | 1 cut(s) | 257 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 870 |
| XapI | RAATTY | 2 cut(s) | 927, 978 |
| XbaI | TCTAGA | 1 cut(s) | 544 |
| XceI | RCATGY | 1 cut(s) | 283 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 810 |
| XspI | CTAG | 4 cut(s) | 150, 198, 291, 545 |