transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 443 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 453 |
| AccBSI | CCGCTC | 1 cut(s) | 150 |
| AciI | CCGC | 6 cut(s) | 9, 38, 148, 333, 441, 470 |
| AclWI | GGATC | 2 cut(s) | 43, 313 |
| AcoI | YGGCCR | 1 cut(s) | 334 |
| AcsI | RAATTY | 1 cut(s) | 60 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 453 |
| AgsI | TTSAA | 2 cut(s) | 316, 503 |
| AjnI | CCWGG | 2 cut(s) | 256, 279 |
| AluBI | AGCT | 1 cut(s) | 175 |
| AluI | AGCT | 1 cut(s) | 175 |
| Alw21I | GWGCWC | 1 cut(s) | 177 |
| Alw26I | GTCTC | 1 cut(s) | 422 |
| AlwI | GGATC | 2 cut(s) | 43, 313 |
| AoxI | GGCC | 2 cut(s) | 154, 334 |
| ApeKI | GCWGC | 1 cut(s) | 11 |
| ApoI | RAATTY | 1 cut(s) | 60 |
| AspLEI | GCGC | 1 cut(s) | 186 |
| AspS9I | GGNCC | 2 cut(s) | 155, 260 |
| AvaII | GGWCC | 1 cut(s) | 260 |
| BanI | GGYRCC | 1 cut(s) | 443 |
| BanII | GRGCYC | 2 cut(s) | 28, 177 |
| Bbv12I | GWGCWC | 1 cut(s) | 177 |
| BccI | CCATC | 3 cut(s) | 86, 330, 423 |
| BciT130I | CCWGG | 2 cut(s) | 258, 281 |
| BclI | TGATCA | 1 cut(s) | 480 |
| BcoDI | GTCTC | 1 cut(s) | 422 |
| BisI | GCNGC | 3 cut(s) | 12, 334, 470 |
| BlpI | GCTNAGC | 1 cut(s) | 84 |
| BlsI | GCNGC | 3 cut(s) | 13, 335, 471 |
| Bme1390I | CCNGG | 2 cut(s) | 258, 281 |
| Bme18I | GGWCC | 1 cut(s) | 260 |
| BmgT120I | GGNCC | 2 cut(s) | 155, 260 |
| BmiI | GGNNCC | 4 cut(s) | 25, 157, 297, 445 |
| BmrFI | CCNGG | 2 cut(s) | 258, 281 |
| BmrI | ACTGGG | 2 cut(s) | 47, 62 |
| BmsI | GCATC | 2 cut(s) | 212, 391 |
| BmuI | ACTGGG | 2 cut(s) | 47, 62 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 159, 191 |
| Bpu10I | CCTNAGC | 1 cut(s) | 151 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 84 |
| BsaJI | CCNNGG | 3 cut(s) | 121, 256, 280 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 419, 449 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 453 |
| Bse1I | ACTGG | 2 cut(s) | 53, 68 |
| BseBI | CCWGG | 2 cut(s) | 258, 281 |
| BseDI | CCNNGG | 3 cut(s) | 121, 256, 280 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 453 |
| BseMII | CTCAG | 2 cut(s) | 33, 165 |
| BseNI | ACTGG | 2 cut(s) | 53, 68 |
| BsgI | GTGCAG | 1 cut(s) | 255 |
| Bsh1285I | CGRYCG | 2 cut(s) | 181, 291 |
| BshFI | GGCC | 2 cut(s) | 156, 336 |
| BshNI | GGYRCC | 1 cut(s) | 443 |
| BsiEI | CGRYCG | 2 cut(s) | 181, 291 |
| BsiHKAI | GWGCWC | 1 cut(s) | 177 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 453 |
| BsmAI | GTCTC | 1 cut(s) | 422 |
| BsnI | GGCC | 2 cut(s) | 156, 336 |
| Bsp1286I | GDGCHC | 2 cut(s) | 28, 177 |
| Bsp143I | GATC | 5 cut(s) | 48, 178, 288, 318, 480 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 84 |
| BspACI | CCGC | 6 cut(s) | 9, 38, 148, 333, 441, 470 |
| BspANI | GGCC | 2 cut(s) | 156, 336 |
| BspCNI | CTCAG | 2 cut(s) | 32, 164 |
| BspLI | GGNNCC | 4 cut(s) | 25, 157, 297, 445 |
| BspPI | GGATC | 2 cut(s) | 43, 313 |
| BspQI | GCTCTTC | 1 cut(s) | 165 |
| BspT107I | GGYRCC | 1 cut(s) | 443 |
| BsrBI | CCGCTC | 1 cut(s) | 150 |
| BsrI | ACTGG | 2 cut(s) | 53, 68 |
| BssECI | CCNNGG | 3 cut(s) | 121, 256, 280 |
| BssMI | GATC | 5 cut(s) | 48, 178, 288, 318, 480 |
| BssT1I | CCWWGG | 1 cut(s) | 121 |
| Bst2UI | CCWGG | 2 cut(s) | 258, 281 |
| Bst6I | CTCTTC | 1 cut(s) | 165 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 11 |
| BstDEI | CTNAG | 4 cut(s) | 19, 84, 151, 209 |
| BstHHI | GCGC | 1 cut(s) | 186 |
| BstKTI | GATC | 5 cut(s) | 51, 181, 291, 321, 483 |
| BstMAI | GTCTC | 1 cut(s) | 422 |
| BstMBI | GATC | 5 cut(s) | 48, 178, 288, 318, 480 |
| BstMCI | CGRYCG | 2 cut(s) | 181, 291 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 181, 230 |
| BstNI | CCWGG | 2 cut(s) | 258, 281 |
| BstNSI | RCATGY | 1 cut(s) | 44 |
| BstSCI | CCNGG | 2 cut(s) | 256, 279 |
| BstX2I | RGATCY | 1 cut(s) | 318 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 329 |
| BstYI | RGATCY | 1 cut(s) | 318 |
| BsuRI | GGCC | 2 cut(s) | 156, 336 |
| BtgZI | GCGATG | 2 cut(s) | 64, 189 |
| BtsIMutI | CAGTG | 1 cut(s) | 75 |
| CfoI | GCGC | 1 cut(s) | 186 |
| Cfr13I | GGNCC | 2 cut(s) | 155, 260 |
| CviAII | CATG | 3 cut(s) | 41, 358, 448 |
| CviJI | RGCY | 5 cut(s) | 26, 156, 175, 216, 336 |
| CviKI_1 | RGCY | 5 cut(s) | 26, 156, 175, 216, 336 |
| DdeI | CTNAG | 4 cut(s) | 19, 84, 151, 209 |
| DpnI | GATC | 5 cut(s) | 50, 180, 290, 320, 482 |
| DpnII | GATC | 5 cut(s) | 48, 178, 288, 318, 480 |
| EaeI | YGGCCR | 1 cut(s) | 334 |
| Eam1104I | CTCTTC | 1 cut(s) | 165 |
| EarI | CTCTTC | 1 cut(s) | 165 |
| Ecl136II | GAGCTC | 1 cut(s) | 175 |
| Eco130I | CCWWGG | 1 cut(s) | 121 |
| Eco24I | GRGCYC | 2 cut(s) | 28, 177 |
| Eco47I | GGWCC | 1 cut(s) | 260 |
| Eco53kI | GAGCTC | 1 cut(s) | 175 |
| EcoICRI | GAGCTC | 1 cut(s) | 175 |
| EcoO109I | RGGNCCY | 1 cut(s) | 155 |
| EcoRII | CCWGG | 2 cut(s) | 256, 279 |
| EcoT14I | CCWWGG | 1 cut(s) | 121 |
| EcoT38I | GRGCYC | 2 cut(s) | 28, 177 |
| ErhI | CCWWGG | 1 cut(s) | 121 |
| FaeI | CATG | 3 cut(s) | 44, 361, 451 |
| FaiI | YATR | 6 cut(s) | 42, 188, 330, 359, 449, 462 |
| FatI | CATG | 3 cut(s) | 40, 357, 447 |
| FauI | CCCGC | 1 cut(s) | 155 |
| FbaI | TGATCA | 1 cut(s) | 480 |
| Fnu4HI | GCNGC | 3 cut(s) | 12, 334, 470 |
| FriOI | GRGCYC | 2 cut(s) | 28, 177 |
| Fsp4HI | GCNGC | 3 cut(s) | 12, 334, 470 |
| GlaI | GCGC | 1 cut(s) | 185 |
| GluI | GCNGC | 3 cut(s) | 12, 334, 470 |
| HaeIII | GGCC | 2 cut(s) | 156, 336 |
| HhaI | GCGC | 1 cut(s) | 186 |
| Hin1II | CATG | 3 cut(s) | 44, 361, 451 |
| Hin6I | GCGC | 1 cut(s) | 184 |
| HinP1I | GCGC | 1 cut(s) | 184 |
| HincII | GTYRAC | 1 cut(s) | 118 |
| HindII | GTYRAC | 1 cut(s) | 118 |
| HinfI | GANTC | 4 cut(s) | 276, 344, 371, 464 |
| Hpy166II | GTNNAC | 1 cut(s) | 118 |
| Hpy188III | TCNNGA | 4 cut(s) | 21, 395, 425, 503 |
| Hpy8I | GTNNAC | 1 cut(s) | 118 |
| HpyCH4V | TGCA | 3 cut(s) | 73, 272, 404 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 181, 230 |
| HpyF3I | CTNAG | 4 cut(s) | 19, 84, 151, 209 |
| Hsp92II | CATG | 3 cut(s) | 44, 361, 451 |
| HspAI | GCGC | 1 cut(s) | 184 |
| Ksp22I | TGATCA | 1 cut(s) | 480 |
| Kzo9I | GATC | 5 cut(s) | 48, 178, 288, 318, 480 |
| LguI | GCTCTTC | 1 cut(s) | 165 |
| LmnI | GCTCC | 1 cut(s) | 23 |
| LweI | GCATC | 2 cut(s) | 212, 391 |
| MaeIII | GTNAC | 1 cut(s) | 247 |
| MalI | GATC | 5 cut(s) | 50, 180, 290, 320, 482 |
| MbiI | CCGCTC | 1 cut(s) | 150 |
| MboI | GATC | 5 cut(s) | 48, 178, 288, 318, 480 |
| MboII | GAAGA | 2 cut(s) | 182, 328 |
| MfeI | CAATTG | 1 cut(s) | 111 |
| MflI | RGATCY | 1 cut(s) | 318 |
| MhlI | GDGCHC | 2 cut(s) | 28, 177 |
| MluCI | AATT | 3 cut(s) | 60, 111, 484 |
| MlyI | GAGTC | 1 cut(s) | 473 |
| MnlI | CCTC | 5 cut(s) | 106, 193, 206, 312, 377 |
| MseI | TTAA | 1 cut(s) | 516 |
| MslI | CAYNNNNRTG | 3 cut(s) | 327, 356, 399 |
| MspA1I | CMGCKG | 1 cut(s) | 11 |
| MspR9I | CCNGG | 2 cut(s) | 258, 281 |
| MunI | CAATTG | 1 cut(s) | 111 |
| MvaI | CCWGG | 2 cut(s) | 258, 281 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 181, 230 |
| NdeII | GATC | 5 cut(s) | 48, 178, 288, 318, 480 |
| NlaIII | CATG | 3 cut(s) | 44, 361, 451 |
| NlaIV | GGNNCC | 4 cut(s) | 25, 157, 297, 445 |
| NspI | RCATGY | 1 cut(s) | 44 |
| PciSI | GCTCTTC | 1 cut(s) | 165 |
| PfeI | GAWTC | 3 cut(s) | 276, 344, 371 |
| PflFI | GACNNNGTC | 1 cut(s) | 433 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 453 |
| PkrI | GCNGC | 3 cut(s) | 13, 335, 471 |
| Ple19I | CGATCG | 2 cut(s) | 181, 291 |
| PleI | GAGTC | 1 cut(s) | 472 |
| PpsI | GAGTC | 1 cut(s) | 472 |
| Psp124BI | GAGCTC | 1 cut(s) | 177 |
| Psp6I | CCWGG | 2 cut(s) | 256, 279 |
| PspGI | CCWGG | 2 cut(s) | 256, 279 |
| PspN4I | GGNNCC | 4 cut(s) | 25, 157, 297, 445 |
| PspPI | GGNCC | 2 cut(s) | 155, 260 |
| PsuI | RGATCY | 1 cut(s) | 318 |
| PsyI | GACNNNGTC | 1 cut(s) | 433 |
| PvuI | CGATCG | 2 cut(s) | 181, 291 |
| RseI | CAYNNNNRTG | 3 cut(s) | 327, 356, 399 |
| SacI | GAGCTC | 1 cut(s) | 177 |
| SapI | GCTCTTC | 1 cut(s) | 165 |
| SaqAI | TTAA | 1 cut(s) | 516 |
| SatI | GCNGC | 3 cut(s) | 12, 334, 470 |
| Sau3AI | GATC | 5 cut(s) | 48, 178, 288, 318, 480 |
| Sau96I | GGNCC | 2 cut(s) | 155, 260 |
| SchI | GAGTC | 1 cut(s) | 473 |
| ScrFI | CCNGG | 2 cut(s) | 258, 281 |
| SduI | GDGCHC | 2 cut(s) | 28, 177 |
| SetI | ASST | 4 cut(s) | 123, 133, 177, 313 |
| SfaNI | GCATC | 2 cut(s) | 212, 391 |
| SinI | GGWCC | 1 cut(s) | 260 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 327, 356, 399 |
| Sse9I | AATT | 3 cut(s) | 60, 111, 484 |
| SsiI | CCGC | 6 cut(s) | 9, 38, 148, 333, 441, 470 |
| SstI | GAGCTC | 1 cut(s) | 177 |
| StyD4I | CCNGG | 2 cut(s) | 256, 279 |
| StyI | CCWWGG | 1 cut(s) | 121 |
| TaqI | TCGA | 3 cut(s) | 177, 287, 369 |
| TasI | AATT | 3 cut(s) | 60, 111, 484 |
| TauI | GCSGC | 2 cut(s) | 336, 472 |
| TfiI | GAWTC | 3 cut(s) | 276, 344, 371 |
| Tru1I | TTAA | 1 cut(s) | 516 |
| Tru9I | TTAA | 1 cut(s) | 516 |
| TscAI | CASTG | 1 cut(s) | 75 |
| TseI | GCWGC | 1 cut(s) | 11 |
| TspDTI | ATGAA | 1 cut(s) | 477 |
| TspRI | CASTG | 1 cut(s) | 75 |
| Tth111I | GACNNNGTC | 1 cut(s) | 433 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 453 |
| VpaK11BI | GGWCC | 1 cut(s) | 260 |
| XapI | RAATTY | 1 cut(s) | 60 |
| XceI | RCATGY | 1 cut(s) | 44 |