transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 105, 350 |
| AciI | CCGC | 3 cut(s) | 46, 291, 348 |
| AclWI | GGATC | 1 cut(s) | 63 |
| AcoI | YGGCCR | 2 cut(s) | 398, 404 |
| AcsI | RAATTY | 1 cut(s) | 143 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 73, 242, 388 |
| AlwI | GGATC | 1 cut(s) | 63 |
| Ama87I | CYCGRG | 1 cut(s) | 236 |
| AoxI | GGCC | 2 cut(s) | 398, 404 |
| ApeKI | GCWGC | 1 cut(s) | 22 |
| ApoI | RAATTY | 1 cut(s) | 143 |
| AsuC2I | CCSGG | 2 cut(s) | 237, 238 |
| AvaI | CYCGRG | 1 cut(s) | 236 |
| BalI | TGGCCA | 1 cut(s) | 400 |
| BbvI | GCAGC | 1 cut(s) | 34 |
| BccI | CCATC | 3 cut(s) | 108, 160, 346 |
| BceAI | ACGGC | 2 cut(s) | 85, 419 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 296, 330 |
| BclI | TGATCA | 1 cut(s) | 190 |
| BcnI | CCSGG | 2 cut(s) | 237, 238 |
| BisI | GCNGC | 2 cut(s) | 23, 47 |
| BlsI | GCNGC | 2 cut(s) | 24, 48 |
| Bme1390I | CCNGG | 2 cut(s) | 237, 238 |
| BmeT110I | CYCGRG | 1 cut(s) | 236 |
| BmiI | GGNNCC | 1 cut(s) | 380 |
| BmrFI | CCNGG | 2 cut(s) | 237, 238 |
| BpuEI | CTTGAG | 1 cut(s) | 305 |
| BpuMI | CCSGG | 2 cut(s) | 237, 238 |
| BsaJI | CCNNGG | 5 cut(s) | 67, 235, 236, 237, 401 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 73, 242, 388 |
| Bse118I | RCCGGY | 1 cut(s) | 381 |
| BseDI | CCNNGG | 5 cut(s) | 67, 235, 236, 237, 401 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 73, 242, 388 |
| BseXI | GCAGC | 1 cut(s) | 34 |
| Bsh1236I | CGCG | 2 cut(s) | 105, 350 |
| BshFI | GGCC | 2 cut(s) | 400, 406 |
| BsiHKCI | CYCGRG | 1 cut(s) | 236 |
| BsiSI | CCGG | 2 cut(s) | 237, 382 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 73, 242, 388 |
| BsnI | GGCC | 2 cut(s) | 400, 406 |
| BsoBI | CYCGRG | 1 cut(s) | 236 |
| Bsp143I | GATC | 2 cut(s) | 55, 190 |
| Bsp68I | TCGCGA | 1 cut(s) | 105 |
| BspACI | CCGC | 3 cut(s) | 46, 291, 348 |
| BspANI | GGCC | 2 cut(s) | 400, 406 |
| BspFNI | CGCG | 2 cut(s) | 105, 350 |
| BspLI | GGNNCC | 1 cut(s) | 380 |
| BspPI | GGATC | 1 cut(s) | 63 |
| BsrFI | RCCGGY | 1 cut(s) | 381 |
| BssAI | RCCGGY | 1 cut(s) | 381 |
| BssECI | CCNNGG | 5 cut(s) | 67, 235, 236, 237, 401 |
| BssMI | GATC | 2 cut(s) | 55, 190 |
| Bst4CI | ACNGT | 2 cut(s) | 160, 396 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 270 |
| BstC8I | GCNNGC | 2 cut(s) | 126, 275 |
| BstDSI | CCRYGG | 2 cut(s) | 67, 401 |
| BstFNI | CGCG | 2 cut(s) | 105, 350 |
| BstKTI | GATC | 2 cut(s) | 58, 193 |
| BstMBI | GATC | 2 cut(s) | 55, 190 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 270 |
| BstSCI | CCNGG | 2 cut(s) | 235, 236 |
| BstUI | CGCG | 2 cut(s) | 105, 350 |
| BstV1I | GCAGC | 1 cut(s) | 34 |
| BsuRI | GGCC | 2 cut(s) | 400, 406 |
| BtgI | CCRYGG | 2 cut(s) | 67, 401 |
| BtgZI | GCGATG | 2 cut(s) | 86, 365 |
| BtsIMutI | CAGTG | 1 cut(s) | 401 |
| BtuMI | TCGCGA | 1 cut(s) | 105 |
| Cac8I | GCNNGC | 2 cut(s) | 126, 275 |
| Cfr10I | RCCGGY | 1 cut(s) | 381 |
| Cfr9I | CCCGGG | 1 cut(s) | 236 |
| CviAII | CATG | 1 cut(s) | 281 |
| CviJI | RGCY | 6 cut(s) | 124, 128, 170, 381, 400, 406 |
| CviKI_1 | RGCY | 6 cut(s) | 124, 128, 170, 381, 400, 406 |
| DpnI | GATC | 2 cut(s) | 57, 192 |
| DpnII | GATC | 2 cut(s) | 55, 190 |
| EaeI | YGGCCR | 2 cut(s) | 398, 404 |
| Eco88I | CYCGRG | 1 cut(s) | 236 |
| FaeI | CATG | 1 cut(s) | 284 |
| FaiI | YATR | 7 cut(s) | 175, 177, 187, 189, 282, 345, 430 |
| FatI | CATG | 1 cut(s) | 280 |
| FauNDI | CATATG | 1 cut(s) | 175 |
| FbaI | TGATCA | 1 cut(s) | 190 |
| Fnu4HI | GCNGC | 2 cut(s) | 23, 47 |
| Fsp4HI | GCNGC | 2 cut(s) | 23, 47 |
| GluI | GCNGC | 2 cut(s) | 23, 47 |
| HaeIII | GGCC | 2 cut(s) | 400, 406 |
| HapII | CCGG | 2 cut(s) | 237, 382 |
| Hin1II | CATG | 1 cut(s) | 284 |
| HinfI | GANTC | 1 cut(s) | 202 |
| HpaII | CCGG | 2 cut(s) | 237, 382 |
| Hpy166II | GTNNAC | 1 cut(s) | 256 |
| Hpy188III | TCNNGA | 3 cut(s) | 104, 163, 322 |
| Hpy8I | GTNNAC | 1 cut(s) | 256 |
| HpyCH4III | ACNGT | 2 cut(s) | 160, 396 |
| HpyCH4V | TGCA | 2 cut(s) | 198, 273 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 270 |
| Hsp92II | CATG | 1 cut(s) | 284 |
| Ksp22I | TGATCA | 1 cut(s) | 190 |
| Kzo9I | GATC | 2 cut(s) | 55, 190 |
| LmnI | GCTCC | 2 cut(s) | 363, 378 |
| LpnPI | CCDG | 5 cut(s) | 11, 138, 246, 250, 395 |
| Lsp1109I | GCAGC | 1 cut(s) | 34 |
| MaeIII | GTNAC | 1 cut(s) | 293 |
| MalI | GATC | 2 cut(s) | 57, 192 |
| MboI | GATC | 2 cut(s) | 55, 190 |
| MboII | GAAGA | 1 cut(s) | 191 |
| MlsI | TGGCCA | 1 cut(s) | 400 |
| MluCI | AATT | 1 cut(s) | 143 |
| MluNI | TGGCCA | 1 cut(s) | 400 |
| MmeI | TCCRAC | 1 cut(s) | 341 |
| MnlI | CCTC | 4 cut(s) | 142, 277, 329, 429 |
| Mox20I | TGGCCA | 1 cut(s) | 400 |
| MscI | TGGCCA | 1 cut(s) | 400 |
| Msp20I | TGGCCA | 1 cut(s) | 400 |
| MspI | CCGG | 2 cut(s) | 237, 382 |
| MspR9I | CCNGG | 2 cut(s) | 237, 238 |
| MvnI | CGCG | 2 cut(s) | 105, 350 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 270 |
| NciI | CCSGG | 2 cut(s) | 237, 238 |
| NdeI | CATATG | 1 cut(s) | 175 |
| NdeII | GATC | 2 cut(s) | 55, 190 |
| NlaIII | CATG | 1 cut(s) | 284 |
| NlaIV | GGNNCC | 1 cut(s) | 380 |
| NmuCI | GTSAC | 1 cut(s) | 293 |
| NruI | TCGCGA | 1 cut(s) | 105 |
| PfeI | GAWTC | 1 cut(s) | 202 |
| PkrI | GCNGC | 2 cut(s) | 24, 48 |
| PspN4I | GGNNCC | 1 cut(s) | 380 |
| RruI | TCGCGA | 1 cut(s) | 105 |
| SatI | GCNGC | 2 cut(s) | 23, 47 |
| Sau3AI | GATC | 2 cut(s) | 55, 190 |
| ScrFI | CCNGG | 2 cut(s) | 237, 238 |
| SetI | ASST | 1 cut(s) | 153 |
| SmaI | CCCGGG | 1 cut(s) | 238 |
| SmlI | CTYRAG | 1 cut(s) | 320 |
| SmoI | CTYRAG | 1 cut(s) | 320 |
| Sse9I | AATT | 1 cut(s) | 143 |
| SsiI | CCGC | 3 cut(s) | 46, 291, 348 |
| SspI | AATATT | 1 cut(s) | 415 |
| StyD4I | CCNGG | 2 cut(s) | 235, 236 |
| TaaI | ACNGT | 2 cut(s) | 160, 396 |
| TasI | AATT | 1 cut(s) | 143 |
| TauI | GCSGC | 1 cut(s) | 49 |
| TfiI | GAWTC | 1 cut(s) | 202 |
| TscAI | CASTG | 1 cut(s) | 401 |
| TseFI | GTSAC | 1 cut(s) | 293 |
| TseI | GCWGC | 1 cut(s) | 22 |
| Tsp45I | GTSAC | 1 cut(s) | 293 |
| TspDTI | ATGAA | 3 cut(s) | 17, 162, 192 |
| TspMI | CCCGGG | 1 cut(s) | 236 |
| TspRI | CASTG | 1 cut(s) | 401 |
| XapI | RAATTY | 1 cut(s) | 143 |
| XmaI | CCCGGG | 1 cut(s) | 236 |