Rroxscaffold_4G00300410

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
20739933 .. 20740460
528 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00300410.1

Sequence Viewer

Length: 528 bp
ATGCGGTGTTCACGGTTCTCACGGCCTCGTATGAGGACATCTACAACCGAGTGCAAGGATCGGATCCCACCGCCACCCCCCTCCAAAGTATCCAAAAAGGGGCAAACCCAGGAACACCGCAAATGGTGCAAATACCACGGGGACGGCGGCCACAATACCAACAACCGCAACGCTCTCAAAACGGCCATTGAGACCTTGTATCGTGACGACAAGTTAGAACAGTTCAAAGTGCGCCAACCGCCACCTGTGATCGCCAATATTGACACTTTGGGTCGTATCAACACTATCGACGGTGGTGCCCCAATCACTAGCATGTCCCACGGGGCGAGGAAGCGCTATGCACGCGCTAATCACCCAAAGGAAGTCCGTAACATCCGCTACGAAAGATCCGCCAAACTCCTAAGATCGGGATGGGAACCTATTACCTTCTCGGAGGAGGAGGAGCACGGAGTGCATTTACCCCATGACGACCCATTCTTGGTCGACGCCATTCGGGCGGGTTTTCGTGGGACGAATCTTGGTGGATAG

Protein Analysis

175

Amino Acids

19.93

Weight (kDa)

10.01

Isoelectric Point (pI)

49.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000012)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28590 FvH4_1g28873 FvH4_1g29421 FvH4_3g30612 FvH4_4g08351 FvH4_5g00051 FvH4_5g00052 FvH4_6g23091
malus_domestica MD04G1081500.v1.1
rosa_chinensis RchiOBHm_Chr2g0087241 RchiOBHm_Chr2g0114831
rosa_laevigata RLG00000029015
rosa_multiflora Rmu_co7964414.1_g000001 Rmu_co7980906.1_g000001 Rmu_co8005766.1_g000001 Rmu_co8047366.1_g000001 Rmu_co8063302.1_g000001 Rmu_co8079752.1_g000001 Rmu_co8101720.1_g000001 Rmu_co8118790.1_g000001 Rmu_co8136020.1_g000001 Rmu_co8142966.1_g000001 Rmu_co8147912.1_g000001 Rmu_co8169262.1_g000001 Rmu_co8191390.1_g000001 Rmu_co8194052.1_g000001 Rmu_co8197616.1_g000001 Rmu_co8199862.1_g000001 Rmu_co8204128.1_g000002 Rmu_co8204440.1_g000002 Rmu_co8205696.1_g000001 Rmu_co8218142.1_g000001 Rmu_co8221254.1_g000001 Rmu_co8223608.1_g000002 Rmu_co8223626.1_g000001 Rmu_co8227149.1_g000001 Rmu_co8237079.1_g000001 Rmu_co8246167.1_g000001 Rmu_co8256485.1_g000001 Rmu_co8274405.1_g000001 Rmu_co8278411.1_g000001 Rmu_co8291785.1_g000001 Rmu_co8293365.1_g000001 Rmu_co8305301.1_g000001 Rmu_co8312823.1_g000001 Rmu_co8317357.1_g000001 Rmu_co8324793.1_g000001 Rmu_co8334119.1_g000001 Rmu_co8344381.1_g000001 Rmu_co8345225.1_g000001 Rmu_co8355661.1_g000001 Rmu_co8365337.1_g000001 Rmu_co8376357.1_g000001 Rmu_co8382747.1_g000001 Rmu_co8384149.1_g000001 Rmu_co8385415.1_g000002 Rmu_co8401669.1_g000002 Rmu_co8402097.1_g000001 Rmu_co8406229.1_g000001 Rmu_co8406805.1_g000001 Rmu_co8411443.1_g000002 Rmu_co8412007.1_g000002 Rmu_co8412129.1_g000002 Rmu_co8414389.1_g000001 Rmu_co8417429.1_g000001 Rmu_co8418135.1_g000002 Rmu_co8427823.1_g000001 Rmu_co8434337.1_g000001 Rmu_co8440385.1_g000002 Rmu_co8442395.1_g000001 Rmu_co8444287.1_g000001 Rmu_co8454015.1_g000001 Rmu_co8457949.1_g000001 Rmu_co8464897.1_g000002 Rmu_co8466485.1_g000002 Rmu_co8467011.1_g000001 Rmu_co8477109.1_g000002 Rmu_co8479675.1_g000001 Rmu_co8479865.1_g000002 Rmu_co8484273.1_g000002 Rmu_co8484537.1_g000001 Rmu_co8487357.1_g000002 Rmu_co8496813.1_g000001 Rmu_co8496815.1_g000001 Rmu_co8498003.1_g000003 Rmu_co8500745.1_g000001 Rmu_co8513491.1_g000001 Rmu_co8513491.1_g000002 Rmu_co8521719.1_g000001 Rmu_sc0000015.1_g000043 Rmu_sc0000045.1_g000069 Rmu_sc0000070.1_g000020 Rmu_sc0000070.1_g000023 Rmu_sc0000082.1_g000014 Rmu_sc0000082.1_g000047 Rmu_sc0000082.1_g000075 Rmu_sc0000144.1_g000063 Rmu_sc0000149.1_g000039 Rmu_sc0000157.1_g000029 Rmu_sc0000184.1_g000002 Rmu_sc0000212.1_g000007 Rmu_sc0000218.1_g000049 Rmu_sc0000221.1_g000021 Rmu_sc0000235.1_g000021 Rmu_sc0000236.1_g000012 Rmu_sc0000239.1_g000029 Rmu_sc0000239.1_g000068 Rmu_sc0000243.1_g000026 Rmu_sc0000253.1_g000006 Rmu_sc0000258.1_g000031 Rmu_sc0000263.1_g000012 Rmu_sc0000263.1_g000013 Rmu_sc0000276.1_g000055 Rmu_sc0000276.1_g000057 Rmu_sc0000279.1_g000056 Rmu_sc0000302.1_g000030 Rmu_sc0000309.1_g000020 Rmu_sc0000335.1_g000073 Rmu_sc0000335.1_g000117 Rmu_sc0000365.1_g000019 Rmu_sc0000365.1_g000070 Rmu_sc0000367.1_g000230 Rmu_sc0000429.1_g000065 Rmu_sc0000470.1_g000030 Rmu_sc0000473.1_g000010 Rmu_sc0000480.1_g000010 Rmu_sc0000538.1_g000015 Rmu_sc0000538.1_g000032 Rmu_sc0000546.1_g000009 Rmu_sc0000546.1_g000039 Rmu_sc0000565.1_g000009 Rmu_sc0000573.1_g000045 Rmu_sc0000574.1_g000029 Rmu_sc0000580.1_g000024 Rmu_sc0000585.1_g000020 Rmu_sc0000613.1_g000039 Rmu_sc0000619.1_g000008 Rmu_sc0000638.1_g000011 Rmu_sc0000642.1_g000006 Rmu_sc0000662.1_g000025 Rmu_sc0000674.1_g000041 Rmu_sc0000677.1_g000038 Rmu_sc0000687.1_g000002 Rmu_sc0000690.1_g000042 Rmu_sc0000744.1_g000016 Rmu_sc0000744.1_g000031 Rmu_sc0000744.1_g000093 Rmu_sc0000765.1_g000017 Rmu_sc0000772.1_g000015 Rmu_sc0000790.1_g000008 Rmu_sc0000824.1_g000022 Rmu_sc0000829.1_g000007 Rmu_sc0000857.1_g000003 Rmu_sc0000876.1_g000021 Rmu_sc0000898.1_g000064 Rmu_sc0000905.1_g000009 Rmu_sc0000924.1_g000026 Rmu_sc0000959.1_g000016 Rmu_sc0000959.1_g000017 Rmu_sc0000999.1_g000025 Rmu_sc0001010.1_g000051 Rmu_sc0001016.1_g000059 Rmu_sc0001016.1_g000069 Rmu_sc0001023.1_g000063 Rmu_sc0001054.1_g000006 Rmu_sc0001073.1_g000015 Rmu_sc0001127.1_g000011 Rmu_sc0001141.1_g000026 Rmu_sc0001149.1_g000020 Rmu_sc0001152.1_g000029 Rmu_sc0001163.1_g000012 Rmu_sc0001163.1_g000048 Rmu_sc0001170.1_g000019 Rmu_sc0001180.1_g000010 Rmu_sc0001206.1_g000009 Rmu_sc0001211.1_g000073 Rmu_sc0001218.1_g000024 Rmu_sc0001218.1_g000032 Rmu_sc0001242.1_g000009 Rmu_sc0001306.1_g000004 Rmu_sc0001306.1_g000005 Rmu_sc0001325.1_g000002 Rmu_sc0001336.1_g000016 Rmu_sc0001336.1_g000067 Rmu_sc0001355.1_g000031 Rmu_sc0001362.1_g000006 Rmu_sc0001365.1_g000016 Rmu_sc0001393.1_g000015 Rmu_sc0001393.1_g000029 Rmu_sc0001393.1_g000034 Rmu_sc0001398.1_g000015 Rmu_sc0001423.1_g000006 Rmu_sc0001436.1_g000039 Rmu_sc0001443.1_g000007 Rmu_sc0001443.1_g000010 Rmu_sc0001464.1_g000007 Rmu_sc0001468.1_g000027 Rmu_sc0001498.1_g000008 Rmu_sc0001499.1_g000034 Rmu_sc0001499.1_g000051 Rmu_sc0001524.1_g000054 Rmu_sc0001552.1_g000027 Rmu_sc0001567.1_g000003 Rmu_sc0001572.1_g000005 Rmu_sc0001620.1_g000001 Rmu_sc0001626.1_g000030 Rmu_sc0001631.1_g000022 Rmu_sc0001656.1_g000008 Rmu_sc0001668.1_g000008 Rmu_sc0001694.1_g000040 Rmu_sc0001696.1_g000014 Rmu_sc0001744.1_g000043 Rmu_sc0001782.1_g000007 Rmu_sc0001796.1_g000014 Rmu_sc0001849.1_g000021 Rmu_sc0001849.1_g000087 Rmu_sc0001861.1_g000015 Rmu_sc0001861.1_g000053 Rmu_sc0001867.1_g000008 Rmu_sc0001891.1_g000030 Rmu_sc0001916.1_g000008 Rmu_sc0001924.1_g000032 Rmu_sc0001966.1_g000043 Rmu_sc0002002.1_g000025 Rmu_sc0002048.1_g000047 Rmu_sc0002061.1_g000019 Rmu_sc0002081.1_g000021 Rmu_sc0002082.1_g000083 Rmu_sc0002105.1_g000038 Rmu_sc0002129.1_g000029 Rmu_sc0002131.1_g000047 Rmu_sc0002192.1_g000029 Rmu_sc0002197.1_g000021 Rmu_sc0002212.1_g000024 Rmu_sc0002235.1_g000026 Rmu_sc0002235.1_g000055 Rmu_sc0002235.1_g000063 Rmu_sc0002235.1_g000069 Rmu_sc0002272.1_g000004 Rmu_sc0002302.1_g000006 Rmu_sc0002308.1_g000024 Rmu_sc0002312.1_g000014 Rmu_sc0002312.1_g000055 Rmu_sc0002322.1_g000054 Rmu_sc0002332.1_g000012 Rmu_sc0002350.1_g000018 Rmu_sc0002354.1_g000031 Rmu_sc0002369.1_g000039 Rmu_sc0002371.1_g000011 Rmu_sc0002460.1_g000004 Rmu_sc0002476.1_g000009 Rmu_sc0002482.1_g000020 Rmu_sc0002504.1_g000009 Rmu_sc0002508.1_g000028 Rmu_sc0002522.1_g000010 Rmu_sc0002539.1_g000058 Rmu_sc0002549.1_g000016 Rmu_sc0002584.1_g000007 Rmu_sc0002584.1_g000037 Rmu_sc0002591.1_g000002 Rmu_sc0002604.1_g000023 Rmu_sc0002607.1_g000057 Rmu_sc0002656.1_g000010 Rmu_sc0002690.1_g000025 Rmu_sc0002691.1_g000023 Rmu_sc0002701.1_g000010 Rmu_sc0002718.1_g000023 Rmu_sc0002723.1_g000024 Rmu_sc0002764.1_g000026 Rmu_sc0002798.1_g000013 Rmu_sc0002798.1_g000014 Rmu_sc0002889.1_g000010 Rmu_sc0002892.1_g000038 Rmu_sc0002893.1_g000003 Rmu_sc0002919.1_g000008 Rmu_sc0002927.1_g000038 Rmu_sc0002938.1_g000033 Rmu_sc0002942.1_g000035 Rmu_sc0002983.1_g000055 Rmu_sc0003002.1_g000054 Rmu_sc0003024.1_g000013 Rmu_sc0003031.1_g000065 Rmu_sc0003040.1_g000001 Rmu_sc0003044.1_g000006 Rmu_sc0003044.1_g000016 Rmu_sc0003069.1_g000037 Rmu_sc0003088.1_g000004 Rmu_sc0003092.1_g000018 Rmu_sc0003135.1_g000002 Rmu_sc0003160.1_g000018 Rmu_sc0003207.1_g000025 Rmu_sc0003211.1_g000012 Rmu_sc0003226.1_g000038 Rmu_sc0003270.1_g000024 Rmu_sc0003313.1_g000015 Rmu_sc0003413.1_g000019 Rmu_sc0003494.1_g000007 Rmu_sc0003501.1_g000001 Rmu_sc0003522.1_g000030 Rmu_sc0003541.1_g000045 Rmu_sc0003605.1_g000034 Rmu_sc0003610.1_g000010 Rmu_sc0003628.1_g000020 Rmu_sc0003688.1_g000002 Rmu_sc0003705.1_g000003 Rmu_sc0003708.1_g000040 Rmu_sc0003720.1_g000043 Rmu_sc0003733.1_g000007 Rmu_sc0003733.1_g000015 Rmu_sc0003813.1_g000001 Rmu_sc0003822.1_g000011 Rmu_sc0003825.1_g000001 Rmu_sc0003829.1_g000009 Rmu_sc0003829.1_g000034 Rmu_sc0003840.1_g000013 Rmu_sc0003852.1_g000015 Rmu_sc0003859.1_g000037 Rmu_sc0003882.1_g000031 Rmu_sc0003882.1_g000041 Rmu_sc0003920.1_g000017 Rmu_sc0004016.1_g000021 Rmu_sc0004038.1_g000005 Rmu_sc0004120.1_g000010 Rmu_sc0004168.1_g000036 Rmu_sc0004235.1_g000016 Rmu_sc0004236.1_g000008 Rmu_sc0004242.1_g000003 Rmu_sc0004254.1_g000001 Rmu_sc0004298.1_g000012 Rmu_sc0004298.1_g000013 Rmu_sc0004304.1_g000015 Rmu_sc0004339.1_g000027 Rmu_sc0004340.1_g000017 Rmu_sc0004462.1_g000003 Rmu_sc0004467.1_g000051 Rmu_sc0004484.1_g000021 Rmu_sc0004485.1_g000018 Rmu_sc0004572.1_g000019 Rmu_sc0004574.1_g000049 Rmu_sc0004591.1_g000005 Rmu_sc0004606.1_g000003 Rmu_sc0004608.1_g000005 Rmu_sc0004617.1_g000011 Rmu_sc0004657.1_g000084 Rmu_sc0004684.1_g000008 Rmu_sc0004700.1_g000017 Rmu_sc0004798.1_g000007 Rmu_sc0004811.1_g000017 Rmu_sc0004832.1_g000012 Rmu_sc0004832.1_g000030 Rmu_sc0004894.1_g000011 Rmu_sc0004948.1_g000016 Rmu_sc0004988.1_g000006 Rmu_sc0004995.1_g000001 Rmu_sc0005034.1_g000012 Rmu_sc0005050.1_g000007 Rmu_sc0005105.1_g000001 Rmu_sc0005114.1_g000008 Rmu_sc0005130.1_g000003 Rmu_sc0005277.1_g000003 Rmu_sc0005277.1_g000013 Rmu_sc0005290.1_g000007 Rmu_sc0005308.1_g000015 Rmu_sc0005331.1_g000012 Rmu_sc0005347.1_g000002 Rmu_sc0005392.1_g000013 Rmu_sc0005413.1_g000001 Rmu_sc0005431.1_g000029 Rmu_sc0005507.1_g000014 Rmu_sc0005539.1_g000027 Rmu_sc0005569.1_g000008 Rmu_sc0005580.1_g000003 Rmu_sc0005660.1_g000012 Rmu_sc0005664.1_g000035 Rmu_sc0005810.1_g000014 Rmu_sc0005813.1_g000002 Rmu_sc0005856.1_g000006 Rmu_sc0005856.1_g000007 Rmu_sc0005879.1_g000026 Rmu_sc0006003.1_g000009 Rmu_sc0006006.1_g000005 Rmu_sc0006133.1_g000010 Rmu_sc0006133.1_g000015 Rmu_sc0006215.1_g000016 Rmu_sc0006234.1_g000023 Rmu_sc0006244.1_g000014 Rmu_sc0006269.1_g000019 Rmu_sc0006725.1_g000015 Rmu_sc0006728.1_g000006 Rmu_sc0006736.1_g000003 Rmu_sc0006792.1_g000035 Rmu_sc0006888.1_g000041 Rmu_sc0006888.1_g000076 Rmu_sc0006953.1_g000001 Rmu_sc0007077.1_g000003 Rmu_sc0007124.1_g000003 Rmu_sc0007149.1_g000003 Rmu_sc0007286.1_g000016 Rmu_sc0007292.1_g000005 Rmu_sc0007362.1_g000008 Rmu_sc0007367.1_g000006 Rmu_sc0007418.1_g000022 Rmu_sc0007613.1_g000005 Rmu_sc0007674.1_g000001 Rmu_sc0007683.1_g000014 Rmu_sc0007696.1_g000002 Rmu_sc0007886.1_g000004 Rmu_sc0007904.1_g000011 Rmu_sc0007904.1_g000046 Rmu_sc0007996.1_g000004 Rmu_sc0008019.1_g000023 Rmu_sc0008059.1_g000001 Rmu_sc0008086.1_g000001 Rmu_sc0008171.1_g000002 Rmu_sc0008171.1_g000022 Rmu_sc0008177.1_g000019 Rmu_sc0008199.1_g000006 Rmu_sc0008289.1_g000004 Rmu_sc0008487.1_g000006 Rmu_sc0008625.1_g000001 Rmu_sc0008651.1_g000003 Rmu_sc0008651.1_g000004 Rmu_sc0008828.1_g000006 Rmu_sc0008851.1_g000017 Rmu_sc0008974.1_g000003 Rmu_sc0009087.1_g000022 Rmu_sc0009238.1_g000002 Rmu_sc0009431.1_g000010 Rmu_sc0009483.1_g000005 Rmu_sc0009594.1_g000002 Rmu_sc0009687.1_g000009 Rmu_sc0009762.1_g000001 Rmu_sc0009841.1_g000001 Rmu_sc0009895.1_g000014 Rmu_sc0009983.1_g000001 Rmu_sc0010143.1_g000001 Rmu_sc0010152.1_g000002 Rmu_sc0010188.1_g000009 Rmu_sc0010224.1_g000005 Rmu_sc0010389.1_g000014 Rmu_sc0010617.1_g000008 Rmu_sc0010665.1_g000007 Rmu_sc0010665.1_g000019 Rmu_sc0010665.1_g000020 Rmu_sc0010859.1_g000001 Rmu_sc0010914.1_g000008 Rmu_sc0010972.1_g000008 Rmu_sc0011157.1_g000005 Rmu_sc0011203.1_g000013 Rmu_sc0011219.1_g000001 Rmu_sc0011368.1_g000001 Rmu_sc0011549.1_g000011 Rmu_sc0011601.1_g000009 Rmu_sc0011793.1_g000001 Rmu_sc0011845.1_g000001 Rmu_sc0011856.1_g000002 Rmu_sc0012155.1_g000002 Rmu_sc0012180.1_g000020 Rmu_sc0012283.1_g000017 Rmu_sc0012445.1_g000013 Rmu_sc0012539.1_g000001 Rmu_sc0012550.1_g000001 Rmu_sc0012670.1_g000013 Rmu_sc0012760.1_g000001 Rmu_sc0012766.1_g000001 Rmu_sc0012895.1_g000002 Rmu_sc0012905.1_g000001 Rmu_sc0013046.1_g000006 Rmu_sc0013047.1_g000008 Rmu_sc0013057.1_g000001 Rmu_sc0013365.1_g000009 Rmu_sc0013409.1_g000010 Rmu_sc0013552.1_g000018 Rmu_sc0013768.1_g000015 Rmu_sc0013833.1_g000001 Rmu_sc0013951.1_g000003 Rmu_sc0014051.1_g000001 Rmu_sc0014095.1_g000002 Rmu_sc0014095.1_g000003 Rmu_sc0014097.1_g000012 Rmu_sc0014185.1_g000001 Rmu_sc0014348.1_g000002 Rmu_sc0014431.1_g000005 Rmu_sc0014818.1_g000001 Rmu_sc0015084.1_g000003 Rmu_sc0015313.1_g000002 Rmu_sc0015331.1_g000003 Rmu_sc0015713.1_g000011 Rmu_sc0015743.1_g000006 Rmu_sc0015860.1_g000001 Rmu_sc0015899.1_g000002 Rmu_sc0015900.1_g000007 Rmu_sc0015969.1_g000007 Rmu_sc0015976.1_g000004 Rmu_sc0016164.1_g000007 Rmu_sc0016164.1_g000013 Rmu_sc0016360.1_g000002 Rmu_sc0016435.1_g000004 Rmu_sc0017009.1_g000002 Rmu_sc0017148.1_g000001 Rmu_sc0017753.1_g000002 Rmu_sc0017987.1_g000002 Rmu_sc0018437.1_g000001 Rmu_sc0018669.1_g000001 Rmu_sc0018670.1_g000001 Rmu_sc0018786.1_g000001 Rmu_sc0019312.1_g000002 Rmu_sc0019346.1_g000002 Rmu_sc0019623.1_g000001 Rmu_sc0019674.1_g000003 Rmu_sc0019789.1_g000001 Rmu_sc0019790.1_g000006 Rmu_sc0019915.1_g000002 Rmu_sc0021128.1_g000001 Rmu_sc0021231.1_g000001 Rmu_sc0021430.1_g000001 Rmu_sc0021556.1_g000003 Rmu_sc0021646.1_g000001 Rmu_sc0022273.1_g000001 Rmu_sc0022381.1_g000001 Rmu_sc0022484.1_g000001 Rmu_sc0022521.1_g000001 Rmu_sc0022755.1_g000008 Rmu_sc0023272.1_g000002 Rmu_sc0023659.1_g000001 Rmu_sc0023672.1_g000002 Rmu_sc0023844.1_g000001 Rmu_sc0023975.1_g000001 Rmu_sc0024263.1_g000001 Rmu_sc0024406.1_g000003 Rmu_sc0024479.1_g000001 Rmu_sc0024816.1_g000005 Rmu_sc0025106.1_g000007 Rmu_sc0025197.1_g000001 Rmu_sc0025746.1_g000003 Rmu_sc0026938.1_g000001 Rmu_sc0027296.1_g000001 Rmu_sc0027714.1_g000001 Rmu_sc0028516.1_g000001 Rmu_sc0028993.1_g000001 Rmu_sc0029166.1_g000001 Rmu_sc0029330.1_g000003 Rmu_sc0029345.1_g000004 Rmu_sc0030376.1_g000001 Rmu_sc0031326.1_g000004 Rmu_sc0031386.1_g000001 Rmu_sc0031500.1_g000001 Rmu_sc0031844.1_g000001 Rmu_sc0032071.1_g000001 Rmu_sc0032810.1_g000001 Rmu_sc0032856.1_g000001 Rmu_sc0033986.1_g000002 Rmu_sc0034195.1_g000002 Rmu_sc0035210.1_g000001 Rmu_sc0037058.1_g000001 Rmu_sc0037570.1_g000001 Rmu_sc0038133.1_g000001 Rmu_sc0038486.1_g000001 Rmu_sc0039111.1_g000001 Rmu_sc0040406.1_g000006 Rmu_sc0040952.1_g000001 Rmu_sc0041906.1_g000002 Rmu_sc0042135.1_g000001 Rmu_sc0042136.1_g000001 Rmu_ssc0000014.1_g000006 Rmu_ssc0000022.1_g000054 Rmu_ssc0000067.1_g000010 Rmu_ssc0000067.1_g000016 Rmu_ssc0000098.1_g000005 Rmu_ssc0000120.1_g000017 Rmu_ssc0000127.1_g000030 Rmu_ssc0000127.1_g000037 Rmu_ssc0000127.1_g000064 Rmu_ssc0000136.1_g000012 Rmu_ssc0000146.1_g000001 Rmu_ssc0000167.1_g000031 Rmu_ssc0000184.1_g000007 Rmu_ssc0000213.1_g000072 Rmu_ssc0000243.1_g000017 Rmu_ssc0000256.1_g000013 Rmu_ssc0000287.1_g000022 Rmu_ssc0000330.1_g000033 Rmu_ssc0000330.1_g000034 Rmu_ssc0000396.1_g000015 Rmu_ssc0000400.1_g000049 Rmu_ssc0000432.1_g000049 Rmu_ssc0000434.1_g000049 Rmu_ssc0000467.1_g000030 Rmu_ssc0000470.1_g000026
rosa_roxburghii Rroxscaffold_153G00436770 Rroxscaffold_1G00018260 Rroxscaffold_1G00026590 Rroxscaffold_1G00031230 Rroxscaffold_1G00034060 Rroxscaffold_1G00037040 Rroxscaffold_1G00076080 Rroxscaffold_2G00084660 Rroxscaffold_2G00107300 Rroxscaffold_2G00110910 Rroxscaffold_2G00126380 Rroxscaffold_2G00126390 Rroxscaffold_2G00131770 Rroxscaffold_3G00242050 Rroxscaffold_3G00242060 Rroxscaffold_3G00245310 Rroxscaffold_4G00285880 Rroxscaffold_4G00300410 Rroxscaffold_4G00311430 Rroxscaffold_4G00311440 Rroxscaffold_4G00321850 Rroxscaffold_4G00321860 Rroxscaffold_4G00321870 Rroxscaffold_4G00329390 Rroxscaffold_5G00333680 Rroxscaffold_5G00343170 Rroxscaffold_5G00346820 Rroxscaffold_5G00348970 Rroxscaffold_5G00365270 Rroxscaffold_5G00382940 Rroxscaffold_6G00425450 Rroxscaffold_6G00425480 Rroxscaffold_7G00167810 Rroxscaffold_7G00168150 Rroxscaffold_7G00182390 Rroxscaffold_7G00184550 Rroxscaffold_7G00199290 Rroxscaffold_7G00214200 Rroxscaffold_7G00217930
rosa_samantha Rh3BG303800
rosa_wichuraiana Rw4G019340

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 296
AccI GTMKAC 1 cut(s) 483
AccII CGCG 1 cut(s) 345
AciI CCGC 9 cut(s) 4, 71, 118, 147, 166, 239, 376, 390, 497
AclWI GGATC 4 cut(s) 58, 66, 71, 381
AcoI YGGCCR 2 cut(s) 148, 183
AcyI GRCGYC 1 cut(s) 486
AdeI CACNNNGTG 1 cut(s) 451
AfeI AGCGCT 1 cut(s) 335
AfiI CCNNNNNNNGG 3 cut(s) 99, 406, 478
AgsI TTSAA 1 cut(s) 226
AjnI CCWGG 1 cut(s) 108
Alw21I GWGCWC 1 cut(s) 447
Alw26I GTCTC 1 cut(s) 185
AlwI GGATC 4 cut(s) 58, 66, 71, 381
Aor51HI AGCGCT 1 cut(s) 335
AoxI GGCC 3 cut(s) 23, 148, 183
AspLEI GCGC 3 cut(s) 234, 336, 347
AsuHPI GGTGA 1 cut(s) 344
BaeGI GKGCMC 1 cut(s) 301
BamHI GGATCC 1 cut(s) 63
BanI GGYRCC 1 cut(s) 296
Bbv12I GWGCWC 1 cut(s) 447
BccI CCATC 1 cut(s) 405
BceAI ACGGC 3 cut(s) 38, 160, 198
BcgI CGANNNNNNTGC 2 cut(s) 278, 312
BciT130I CCWGG 1 cut(s) 110
BciVI GTATCC 1 cut(s) 100
BcoDI GTCTC 1 cut(s) 185
BfaI CTAG 1 cut(s) 309
BfoI RGCGCY 1 cut(s) 337
BfuI GTATCC 1 cut(s) 100
BglI GCCNNNNNGGC 1 cut(s) 494
BisI GCNGC 1 cut(s) 148
BlsI GCNGC 1 cut(s) 149
Bme1390I CCNGG 1 cut(s) 110
BmiI GGNNCC 3 cut(s) 65, 298, 417
BmrFI CCNGG 1 cut(s) 110
BsaHI GRCGYC 1 cut(s) 486
BsaI GGTCTC 1 cut(s) 185
BsaJI CCNNGG 3 cut(s) 108, 136, 319
Bsc4I CCNNNNNNNGG 3 cut(s) 99, 406, 478
BseBI CCWGG 1 cut(s) 110
BseDI CCNNGG 3 cut(s) 108, 136, 319
BseGI GGATG 2 cut(s) 372, 416
BseLI CCNNNNNNNGG 3 cut(s) 99, 406, 478
BseRI GAGGAG 3 cut(s) 449, 452, 455
BseSI GKGCMC 1 cut(s) 301
Bsh1236I CGCG 1 cut(s) 345
BshFI GGCC 3 cut(s) 25, 150, 185
BshNI GGYRCC 1 cut(s) 296
BsiHKAI GWGCWC 1 cut(s) 447
BslFI GGGAC 3 cut(s) 155, 301, 523
BslI CCNNNNNNNGG 3 cut(s) 99, 406, 478
BsmAI GTCTC 1 cut(s) 185
BsmFI GGGAC 3 cut(s) 155, 301, 523
BsnI GGCC 3 cut(s) 25, 150, 185
Bso31I GGTCTC 1 cut(s) 185
Bsp1286I GDGCHC 2 cut(s) 301, 447
Bsp143I GATC 5 cut(s) 58, 63, 249, 386, 404
BspACI CCGC 9 cut(s) 4, 71, 118, 147, 166, 239, 376, 390, 497
BspANI GGCC 3 cut(s) 25, 150, 185
BspFNI CGCG 1 cut(s) 345
BspLI GGNNCC 3 cut(s) 65, 298, 417
BspPI GGATC 4 cut(s) 58, 66, 71, 381
BspT107I GGYRCC 1 cut(s) 296
BspTNI GGTCTC 1 cut(s) 185
BssECI CCNNGG 3 cut(s) 108, 136, 319
BssMI GATC 5 cut(s) 58, 63, 249, 386, 404
BssNI GRCGYC 1 cut(s) 486
Bst2UI CCWGG 1 cut(s) 110
Bst4CI ACNGT 3 cut(s) 15, 222, 293
BstACI GRCGYC 1 cut(s) 486
BstAPI GCANNNNNTGC 2 cut(s) 126, 451
BstC8I GCNNGC 1 cut(s) 343
BstDEI CTNAG 1 cut(s) 401
BstDSI CCRYGG 2 cut(s) 136, 319
BstF5I GGATG 2 cut(s) 372, 416
BstFNI CGCG 1 cut(s) 345
BstH2I RGCGCY 1 cut(s) 337
BstHHI GCGC 3 cut(s) 234, 336, 347
BstKTI GATC 5 cut(s) 61, 66, 252, 389, 407
BstMAI GTCTC 1 cut(s) 185
BstMBI GATC 5 cut(s) 58, 63, 249, 386, 404
BstMWI GCNNNNNNNGC 5 cut(s) 126, 238, 342, 451, 494
BstNI CCWGG 1 cut(s) 110
BstNSI RCATGY 1 cut(s) 316
BstSCI CCNGG 1 cut(s) 108
BstSLI GKGCMC 1 cut(s) 301
BstUI CGCG 1 cut(s) 345
BstX2I RGATCY 2 cut(s) 63, 386
BstYI RGATCY 2 cut(s) 63, 386
BsuI GTATCC 1 cut(s) 100
BsuRI GGCC 3 cut(s) 25, 150, 185
BtgI CCRYGG 2 cut(s) 136, 319
BtsCI GGATG 2 cut(s) 372, 416
Cac8I GCNNGC 1 cut(s) 343
CfoI GCGC 3 cut(s) 234, 336, 347
CseI GACGC 1 cut(s) 494
CviAII CATG 2 cut(s) 313, 464
CviJI RGCY 3 cut(s) 25, 150, 185
CviKI_1 RGCY 3 cut(s) 25, 150, 185
DdeI CTNAG 1 cut(s) 401
DpnI GATC 5 cut(s) 60, 65, 251, 388, 406
DpnII GATC 5 cut(s) 58, 63, 249, 386, 404
DraIII CACNNNGTG 1 cut(s) 451
EaeI YGGCCR 2 cut(s) 148, 183
EciI GGCGGA 1 cut(s) 379
Eco31I GGTCTC 1 cut(s) 185
Eco47III AGCGCT 1 cut(s) 335
EcoRII CCWGG 1 cut(s) 108
FaeI CATG 2 cut(s) 316, 467
FaiI YATR 4 cut(s) 32, 314, 339, 465
FaqI GGGAC 3 cut(s) 155, 301, 523
FatI CATG 2 cut(s) 312, 463
FauI CCCGC 1 cut(s) 490
FblI GTMKAC 1 cut(s) 483
Fnu4HI GCNGC 1 cut(s) 148
FokI GGATG 2 cut(s) 359, 423
Fsp4HI GCNGC 1 cut(s) 148
FspBI CTAG 1 cut(s) 309
GlaI GCGC 3 cut(s) 233, 335, 346
GluI GCNGC 1 cut(s) 148
HaeII RGCGCY 1 cut(s) 337
HaeIII GGCC 3 cut(s) 25, 150, 185
HgaI GACGC 1 cut(s) 494
HhaI GCGC 3 cut(s) 234, 336, 347
Hin1I GRCGYC 1 cut(s) 486
Hin1II CATG 2 cut(s) 316, 467
Hin6I GCGC 3 cut(s) 232, 334, 345
HinP1I GCGC 3 cut(s) 232, 334, 345
HincII GTYRAC 1 cut(s) 484
HindII GTYRAC 1 cut(s) 484
HinfI GANTC 1 cut(s) 514
HphI GGTGA 1 cut(s) 344
Hpy166II GTNNAC 2 cut(s) 11, 484
Hpy188I TCNGA 2 cut(s) 63, 433
Hpy188III TCNNGA 2 cut(s) 203, 408
Hpy8I GTNNAC 2 cut(s) 11, 484
Hpy99I CGWCG 2 cut(s) 293, 488
HpyAV CCTTC 1 cut(s) 436
HpyCH4III ACNGT 3 cut(s) 15, 222, 293
HpyCH4V TGCA 4 cut(s) 54, 129, 341, 454
HpyF10VI GCNNNNNNNGC 5 cut(s) 126, 238, 342, 451, 494
HpyF3I CTNAG 1 cut(s) 401
Hsp92I GRCGYC 1 cut(s) 486
Hsp92II CATG 2 cut(s) 316, 467
HspAI GCGC 3 cut(s) 232, 334, 345
Kzo9I GATC 5 cut(s) 58, 63, 249, 386, 404
LmnI GCTCC 1 cut(s) 442
LpnPI CCDG 3 cut(s) 95, 122, 258
MaeI CTAG 1 cut(s) 309
MaeIII GTNAC 2 cut(s) 203, 368
MalI GATC 5 cut(s) 60, 65, 251, 388, 406
MboI GATC 5 cut(s) 58, 63, 249, 386, 404
MflI RGATCY 2 cut(s) 63, 386
MhlI GDGCHC 2 cut(s) 301, 447
MnlI CCTC 7 cut(s) 27, 36, 91, 321, 427, 430, 433
MslI CAYNNNNRTG 1 cut(s) 311
MspR9I CCNGG 1 cut(s) 110
MvaI CCWGG 1 cut(s) 110
MvnI CGCG 1 cut(s) 345
MwoI GCNNNNNNNGC 5 cut(s) 126, 238, 342, 451, 494
NdeII GATC 5 cut(s) 58, 63, 249, 386, 404
NlaIII CATG 2 cut(s) 316, 467
NlaIV GGNNCC 3 cut(s) 65, 298, 417
NmuCI GTSAC 1 cut(s) 203
NspI RCATGY 1 cut(s) 316
PfeI GAWTC 1 cut(s) 514
PkrI GCNGC 1 cut(s) 149
Psp6I CCWGG 1 cut(s) 108
PspGI CCWGG 1 cut(s) 108
PspN4I GGNNCC 3 cut(s) 65, 298, 417
PsuI RGATCY 2 cut(s) 63, 386
RseI CAYNNNNRTG 1 cut(s) 311
SalI GTCGAC 1 cut(s) 482
SatI GCNGC 1 cut(s) 148
Sau3AI GATC 5 cut(s) 58, 63, 249, 386, 404
ScrFI CCNGG 1 cut(s) 110
SduI GDGCHC 2 cut(s) 301, 447
SetI ASST 4 cut(s) 197, 247, 421, 428
SmiMI CAYNNNNRTG 1 cut(s) 311
SsiI CCGC 9 cut(s) 4, 71, 118, 147, 166, 239, 376, 390, 497
SspI AATATT 1 cut(s) 259
SspMI CTAG 1 cut(s) 309
StyD4I CCNGG 1 cut(s) 108
TaaI ACNGT 3 cut(s) 15, 222, 293
TaqI TCGA 2 cut(s) 288, 483
TauI GCSGC 1 cut(s) 150
TfiI GAWTC 1 cut(s) 514
TseFI GTSAC 1 cut(s) 203
Tsp45I GTSAC 1 cut(s) 203
TspGWI ACGGA 2 cut(s) 356, 462
XceI RCATGY 1 cut(s) 316
XmiI GTMKAC 1 cut(s) 483
XspI CTAG 1 cut(s) 309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.