transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 308 |
| AccII | CGCG | 4 cut(s) | 105, 242, 244, 246 |
| AciI | CCGC | 6 cut(s) | 16, 103, 140, 277, 291, 432 |
| AclWI | GGATC | 2 cut(s) | 282, 365 |
| AcyI | GRCGYC | 1 cut(s) | 387 |
| AfaI | GTAC | 2 cut(s) | 20, 101 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 15, 259, 308 |
| AflIII | ACRYGT | 1 cut(s) | 213 |
| AgsI | TTSAA | 2 cut(s) | 127, 457 |
| AluBI | AGCT | 3 cut(s) | 237, 298, 475 |
| AluI | AGCT | 3 cut(s) | 237, 298, 475 |
| Alw26I | GTCTC | 2 cut(s) | 86, 222 |
| AlwI | GGATC | 2 cut(s) | 282, 365 |
| AoxI | GGCC | 1 cut(s) | 42 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 389, 421 |
| AspLEI | GCGC | 4 cut(s) | 200, 244, 246, 248 |
| AspS9I | GGNCC | 1 cut(s) | 418 |
| AsuHPI | GGTGA | 2 cut(s) | 199, 316 |
| AvaII | GGWCC | 1 cut(s) | 418 |
| BanII | GRGCYC | 1 cut(s) | 168 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 342, 374 |
| BccI | CCATC | 3 cut(s) | 101, 194, 329 |
| BceAI | ACGGC | 1 cut(s) | 57 |
| BcoDI | GTCTC | 2 cut(s) | 86, 222 |
| BfaI | CTAG | 1 cut(s) | 478 |
| BfoI | RGCGCY | 1 cut(s) | 201 |
| BisI | GCNGC | 2 cut(s) | 140, 433 |
| BlpI | GCTNAGC | 1 cut(s) | 294 |
| BlsI | GCNGC | 2 cut(s) | 141, 434 |
| Bme18I | GGWCC | 1 cut(s) | 418 |
| BmgT120I | GGNCC | 1 cut(s) | 418 |
| BmiI | GGNNCC | 3 cut(s) | 318, 419, 436 |
| BmsI | GCATC | 3 cut(s) | 142, 186, 364 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 294 |
| BsaHI | GRCGYC | 1 cut(s) | 387 |
| BsaJI | CCNNGG | 1 cut(s) | 258 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 419, 449 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 15, 259, 308 |
| BseDI | CCNNGG | 1 cut(s) | 258 |
| BseGI | GGATG | 1 cut(s) | 273 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 15, 259, 308 |
| BsePI | GCGCGC | 2 cut(s) | 242, 244 |
| BseYI | CCCAGC | 1 cut(s) | 12 |
| Bsh1236I | CGCG | 4 cut(s) | 105, 242, 244, 246 |
| BshFI | GGCC | 1 cut(s) | 44 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 15, 259, 308 |
| BsmAI | GTCTC | 2 cut(s) | 86, 222 |
| BsnI | GGCC | 1 cut(s) | 44 |
| Bsp1286I | GDGCHC | 1 cut(s) | 168 |
| Bsp143I | GATC | 4 cut(s) | 287, 305, 370, 381 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 294 |
| BspACI | CCGC | 6 cut(s) | 16, 103, 140, 277, 291, 432 |
| BspANI | GGCC | 1 cut(s) | 44 |
| BspFNI | CGCG | 4 cut(s) | 105, 242, 244, 246 |
| BspLI | GGNNCC | 3 cut(s) | 318, 419, 436 |
| BspPI | GGATC | 2 cut(s) | 282, 365 |
| BspQI | GCTCTTC | 1 cut(s) | 336 |
| BssECI | CCNNGG | 1 cut(s) | 258 |
| BssHII | GCGCGC | 2 cut(s) | 242, 244 |
| BssMI | GATC | 4 cut(s) | 287, 305, 370, 381 |
| BssNI | GRCGYC | 1 cut(s) | 387 |
| BssT1I | CCWWGG | 1 cut(s) | 258 |
| Bst4CI | ACNGT | 1 cut(s) | 194 |
| Bst6I | CTCTTC | 1 cut(s) | 336 |
| BstACI | GRCGYC | 1 cut(s) | 387 |
| BstC8I | GCNNGC | 2 cut(s) | 244, 246 |
| BstDEI | CTNAG | 1 cut(s) | 294 |
| BstF5I | GGATG | 1 cut(s) | 273 |
| BstFNI | CGCG | 4 cut(s) | 105, 242, 244, 246 |
| BstH2I | RGCGCY | 1 cut(s) | 201 |
| BstHHI | GCGC | 4 cut(s) | 200, 244, 246, 248 |
| BstKTI | GATC | 4 cut(s) | 290, 308, 373, 384 |
| BstMAI | GTCTC | 2 cut(s) | 86, 222 |
| BstMBI | GATC | 4 cut(s) | 287, 305, 370, 381 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 139, 243, 276, 352 |
| BstNSI | RCATGY | 1 cut(s) | 217 |
| BstUI | CGCG | 4 cut(s) | 105, 242, 244, 246 |
| BstX2I | RGATCY | 1 cut(s) | 287 |
| BstYI | RGATCY | 1 cut(s) | 287 |
| BsuRI | GGCC | 1 cut(s) | 44 |
| BtgZI | GCGATG | 1 cut(s) | 120 |
| BtsCI | GGATG | 1 cut(s) | 273 |
| BtsI | GCAGTG | 1 cut(s) | 30 |
| BtsIMutI | CAGTG | 1 cut(s) | 30 |
| Cac8I | GCNNGC | 2 cut(s) | 244, 246 |
| CfoI | GCGC | 4 cut(s) | 200, 244, 246, 248 |
| Cfr13I | GGNCC | 1 cut(s) | 418 |
| CseI | GACGC | 2 cut(s) | 161, 395 |
| Csp6I | GTAC | 2 cut(s) | 19, 100 |
| CviAII | CATG | 4 cut(s) | 169, 214, 365, 391 |
| CviJI | RGCY | 8 cut(s) | 44, 139, 155, 166, 237, 298, 435, 475 |
| CviKI_1 | RGCY | 8 cut(s) | 44, 139, 155, 166, 237, 298, 435, 475 |
| CviQI | GTAC | 2 cut(s) | 19, 100 |
| DdeI | CTNAG | 1 cut(s) | 294 |
| DpnI | GATC | 4 cut(s) | 289, 307, 372, 383 |
| DpnII | GATC | 4 cut(s) | 287, 305, 370, 381 |
| Eam1104I | CTCTTC | 1 cut(s) | 336 |
| EarI | CTCTTC | 1 cut(s) | 336 |
| Eco130I | CCWWGG | 1 cut(s) | 258 |
| Eco24I | GRGCYC | 1 cut(s) | 168 |
| Eco47I | GGWCC | 1 cut(s) | 418 |
| EcoO109I | RGGNCCY | 1 cut(s) | 418 |
| EcoT14I | CCWWGG | 1 cut(s) | 258 |
| EcoT38I | GRGCYC | 1 cut(s) | 168 |
| ErhI | CCWWGG | 1 cut(s) | 258 |
| FaeI | CATG | 4 cut(s) | 172, 217, 368, 394 |
| FaiI | YATR | 8 cut(s) | 32, 54, 170, 215, 222, 282, 366, 392 |
| FatI | CATG | 4 cut(s) | 168, 213, 364, 390 |
| Fnu4HI | GCNGC | 2 cut(s) | 140, 433 |
| FokI | GGATG | 1 cut(s) | 260 |
| FriOI | GRGCYC | 1 cut(s) | 168 |
| Fsp4HI | GCNGC | 2 cut(s) | 140, 433 |
| FspBI | CTAG | 1 cut(s) | 478 |
| GlaI | GCGC | 4 cut(s) | 199, 243, 245, 247 |
| GluI | GCNGC | 2 cut(s) | 140, 433 |
| GsaI | CCCAGC | 1 cut(s) | 16 |
| HaeII | RGCGCY | 1 cut(s) | 201 |
| HaeIII | GGCC | 1 cut(s) | 44 |
| HgaI | GACGC | 2 cut(s) | 161, 395 |
| HhaI | GCGC | 4 cut(s) | 200, 244, 246, 248 |
| Hin1I | GRCGYC | 1 cut(s) | 387 |
| Hin1II | CATG | 4 cut(s) | 172, 217, 368, 394 |
| Hin6I | GCGC | 4 cut(s) | 198, 242, 244, 246 |
| HinP1I | GCGC | 4 cut(s) | 198, 242, 244, 246 |
| HinfI | GANTC | 1 cut(s) | 5 |
| HphI | GGTGA | 2 cut(s) | 199, 316 |
| Hpy188I | TCNGA | 2 cut(s) | 334, 439 |
| Hpy188III | TCNNGA | 2 cut(s) | 91, 379 |
| Hpy99I | CGWCG | 3 cut(s) | 177, 194, 389 |
| HpyAV | CCTTC | 2 cut(s) | 337, 408 |
| HpyCH4III | ACNGT | 1 cut(s) | 194 |
| HpyCH4V | TGCA | 3 cut(s) | 69, 133, 355 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 139, 243, 276, 352 |
| HpyF3I | CTNAG | 1 cut(s) | 294 |
| Hsp92I | GRCGYC | 1 cut(s) | 387 |
| Hsp92II | CATG | 4 cut(s) | 172, 217, 368, 394 |
| HspAI | GCGC | 4 cut(s) | 198, 242, 244, 246 |
| Kzo9I | GATC | 4 cut(s) | 287, 305, 370, 381 |
| LguI | GCTCTTC | 1 cut(s) | 336 |
| LmnI | GCTCC | 4 cut(s) | 118, 205, 303, 440 |
| LpnPI | CCDG | 4 cut(s) | 26, 61, 159, 294 |
| LweI | GCATC | 3 cut(s) | 142, 186, 364 |
| MaeI | CTAG | 1 cut(s) | 478 |
| MalI | GATC | 4 cut(s) | 289, 307, 372, 383 |
| MauBI | CGCGCGCG | 1 cut(s) | 242 |
| MboI | GATC | 4 cut(s) | 287, 305, 370, 381 |
| MboII | GAAGA | 3 cut(s) | 350, 353, 445 |
| MflI | RGATCY | 1 cut(s) | 287 |
| MhlI | GDGCHC | 1 cut(s) | 168 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MmeI | TCCRAC | 1 cut(s) | 96 |
| MnlI | CCTC | 4 cut(s) | 19, 47, 55, 328 |
| MslI | CAYNNNNRTG | 1 cut(s) | 212 |
| MspA1I | CMGCKG | 2 cut(s) | 16, 432 |
| MvnI | CGCG | 4 cut(s) | 105, 242, 244, 246 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 139, 243, 276, 352 |
| NdeII | GATC | 4 cut(s) | 287, 305, 370, 381 |
| NlaIII | CATG | 4 cut(s) | 172, 217, 368, 394 |
| NlaIV | GGNNCC | 3 cut(s) | 318, 419, 436 |
| NspI | RCATGY | 1 cut(s) | 217 |
| PauI | GCGCGC | 2 cut(s) | 242, 244 |
| PciI | ACATGT | 1 cut(s) | 213 |
| PciSI | GCTCTTC | 1 cut(s) | 336 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 308 |
| PkrI | GCNGC | 2 cut(s) | 141, 434 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| PpuMI | RGGWCCY | 1 cut(s) | 418 |
| PscI | ACATGT | 1 cut(s) | 213 |
| Psp5II | RGGWCCY | 1 cut(s) | 418 |
| PspFI | CCCAGC | 1 cut(s) | 12 |
| PspN4I | GGNNCC | 3 cut(s) | 318, 419, 436 |
| PspPI | GGNCC | 1 cut(s) | 418 |
| PspPPI | RGGWCCY | 1 cut(s) | 418 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 11, 43 |
| PsuI | RGATCY | 1 cut(s) | 287 |
| PteI | GCGCGC | 2 cut(s) | 242, 244 |
| RsaI | GTAC | 2 cut(s) | 20, 101 |
| RsaNI | GTAC | 2 cut(s) | 19, 100 |
| RseI | CAYNNNNRTG | 1 cut(s) | 212 |
| SapI | GCTCTTC | 1 cut(s) | 336 |
| SatI | GCNGC | 2 cut(s) | 140, 433 |
| Sau3AI | GATC | 4 cut(s) | 287, 305, 370, 381 |
| Sau96I | GGNCC | 1 cut(s) | 418 |
| SchI | GAGTC | 1 cut(s) | 14 |
| SduI | GDGCHC | 1 cut(s) | 168 |
| SetI | ASST | 6 cut(s) | 132, 148, 239, 300, 329, 477 |
| SfaNI | GCATC | 3 cut(s) | 142, 186, 364 |
| SinI | GGWCC | 1 cut(s) | 418 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 212 |
| SsiI | CCGC | 6 cut(s) | 16, 103, 140, 277, 291, 432 |
| SspMI | CTAG | 1 cut(s) | 478 |
| StyI | CCWWGG | 1 cut(s) | 258 |
| TaaI | ACNGT | 1 cut(s) | 194 |
| TaqI | TCGA | 4 cut(s) | 90, 162, 189, 384 |
| TauI | GCSGC | 2 cut(s) | 142, 435 |
| TscAI | CASTG | 1 cut(s) | 30 |
| TspDTI | ATGAA | 1 cut(s) | 19 |
| TspRI | CASTG | 1 cut(s) | 30 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 308 |
| VpaK11BI | GGWCC | 1 cut(s) | 418 |
| XceI | RCATGY | 1 cut(s) | 217 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 309 |
| XspI | CTAG | 1 cut(s) | 478 |