transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 550 |
| Acc36I | ACCTGC | 1 cut(s) | 550 |
| Acc65I | GGTACC | 1 cut(s) | 380 |
| AccB1I | GGYRCC | 2 cut(s) | 380, 721 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 319 |
| AccI | GTMKAC | 1 cut(s) | 486 |
| AccII | CGCG | 1 cut(s) | 177 |
| AciI | CCGC | 2 cut(s) | 120, 177 |
| AclWI | GGATC | 4 cut(s) | 111, 124, 356, 369 |
| AcyI | GRCGYC | 1 cut(s) | 291 |
| AfaI | GTAC | 2 cut(s) | 382, 828 |
| AfeI | AGCGCT | 1 cut(s) | 65 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 91, 250, 319, 337 |
| AflIII | ACRYGT | 1 cut(s) | 42 |
| AgsI | TTSAA | 4 cut(s) | 18, 100, 160, 699 |
| AjnI | CCWGG | 2 cut(s) | 136, 756 |
| AluBI | AGCT | 2 cut(s) | 773, 853 |
| AluI | AGCT | 2 cut(s) | 773, 853 |
| Alw26I | GTCTC | 2 cut(s) | 394, 608 |
| AlwI | GGATC | 4 cut(s) | 111, 124, 356, 369 |
| Aor51HI | AGCGCT | 1 cut(s) | 65 |
| AoxI | GGCC | 1 cut(s) | 241 |
| ApeKI | GCWGC | 3 cut(s) | 683, 773, 853 |
| Asp718I | GGTACC | 1 cut(s) | 380 |
| AspLEI | GCGC | 4 cut(s) | 66, 177, 263, 559 |
| AspS9I | GGNCC | 1 cut(s) | 241 |
| AsuC2I | CCSGG | 1 cut(s) | 245 |
| AsuHPI | GGTGA | 4 cut(s) | 145, 302, 535, 655 |
| BaeGI | GKGCMC | 1 cut(s) | 726 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 372, 405 |
| BamHI | GGATCC | 2 cut(s) | 116, 361 |
| BanI | GGYRCC | 2 cut(s) | 380, 721 |
| BanII | GRGCYC | 1 cut(s) | 150 |
| BbvI | GCAGC | 3 cut(s) | 670, 760, 840 |
| BccI | CCATC | 5 cut(s) | 44, 158, 278, 308, 428 |
| BceAI | ACGGC | 1 cut(s) | 278 |
| BciT130I | CCWGG | 2 cut(s) | 138, 758 |
| BciVI | GTATCC | 1 cut(s) | 764 |
| BcnI | CCSGG | 1 cut(s) | 245 |
| BcoDI | GTCTC | 2 cut(s) | 394, 608 |
| BfaI | CTAG | 4 cut(s) | 651, 803, 837, 857 |
| BfoI | RGCGCY | 2 cut(s) | 67, 264 |
| BfuAI | ACCTGC | 1 cut(s) | 550 |
| BfuI | GTATCC | 1 cut(s) | 764 |
| BisI | GCNGC | 4 cut(s) | 178, 684, 774, 854 |
| BlsI | GCNGC | 4 cut(s) | 179, 685, 775, 855 |
| Bme1390I | CCNGG | 3 cut(s) | 138, 245, 758 |
| BmgT120I | GGNCC | 1 cut(s) | 241 |
| BmiI | GGNNCC | 6 cut(s) | 118, 147, 363, 382, 691, 723 |
| BmrFI | CCNGG | 3 cut(s) | 138, 245, 758 |
| BmsI | GCATC | 3 cut(s) | 13, 19, 189 |
| BpuMI | CCSGG | 1 cut(s) | 245 |
| BsaHI | GRCGYC | 1 cut(s) | 291 |
| BsaI | GGTCTC | 1 cut(s) | 608 |
| BsaWI | WCCGGW | 2 cut(s) | 580, 692 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 91, 250, 319, 337 |
| Bse1I | ACTGG | 2 cut(s) | 676, 823 |
| Bse3DI | GCAATG | 2 cut(s) | 633, 645 |
| BseBI | CCWGG | 2 cut(s) | 138, 758 |
| BseGI | GGATG | 2 cut(s) | 34, 180 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 91, 250, 319, 337 |
| BseMI | GCAATG | 2 cut(s) | 633, 645 |
| BseMII | CTCAG | 1 cut(s) | 654 |
| BseNI | ACTGG | 2 cut(s) | 676, 823 |
| BseRI | GAGGAG | 1 cut(s) | 179 |
| BseSI | GKGCMC | 1 cut(s) | 726 |
| BseXI | GCAGC | 3 cut(s) | 670, 760, 840 |
| BsgI | GTGCAG | 1 cut(s) | 759 |
| Bsh1236I | CGCG | 1 cut(s) | 177 |
| BshFI | GGCC | 1 cut(s) | 243 |
| BshNI | GGYRCC | 2 cut(s) | 380, 721 |
| BsiSI | CCGG | 3 cut(s) | 244, 581, 693 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 91, 250, 319, 337 |
| BsmAI | GTCTC | 2 cut(s) | 394, 608 |
| BsnI | GGCC | 1 cut(s) | 243 |
| Bso31I | GGTCTC | 1 cut(s) | 608 |
| Bsp1286I | GDGCHC | 2 cut(s) | 150, 726 |
| Bsp143I | GATC | 4 cut(s) | 116, 279, 361, 538 |
| BspACI | CCGC | 2 cut(s) | 120, 177 |
| BspANI | GGCC | 1 cut(s) | 243 |
| BspCNI | CTCAG | 1 cut(s) | 655 |
| BspFNI | CGCG | 1 cut(s) | 177 |
| BspLI | GGNNCC | 6 cut(s) | 118, 147, 363, 382, 691, 723 |
| BspMI | ACCTGC | 1 cut(s) | 550 |
| BspPI | GGATC | 4 cut(s) | 111, 124, 356, 369 |
| BspQI | GCTCTTC | 1 cut(s) | 165 |
| BspT107I | GGYRCC | 2 cut(s) | 380, 721 |
| BspTNI | GGTCTC | 1 cut(s) | 608 |
| BsrDI | GCAATG | 2 cut(s) | 633, 645 |
| BsrI | ACTGG | 2 cut(s) | 676, 823 |
| BssMI | GATC | 4 cut(s) | 116, 279, 361, 538 |
| BssNI | GRCGYC | 1 cut(s) | 291 |
| Bst2UI | CCWGG | 2 cut(s) | 138, 758 |
| Bst4CI | ACNGT | 2 cut(s) | 491, 780 |
| Bst6I | CTCTTC | 3 cut(s) | 165, 271, 347 |
| BstACI | GRCGYC | 1 cut(s) | 291 |
| BstC8I | GCNNGC | 1 cut(s) | 688 |
| BstDEI | CTNAG | 3 cut(s) | 457, 663, 749 |
| BstF5I | GGATG | 2 cut(s) | 34, 180 |
| BstFNI | CGCG | 1 cut(s) | 177 |
| BstH2I | RGCGCY | 2 cut(s) | 67, 264 |
| BstHHI | GCGC | 4 cut(s) | 66, 177, 263, 559 |
| BstKTI | GATC | 4 cut(s) | 119, 282, 364, 541 |
| BstMAI | GTCTC | 2 cut(s) | 394, 608 |
| BstMBI | GATC | 4 cut(s) | 116, 279, 361, 538 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 436, 563, 853 |
| BstNI | CCWGG | 2 cut(s) | 138, 758 |
| BstNSI | RCATGY | 1 cut(s) | 46 |
| BstSCI | CCNGG | 3 cut(s) | 136, 243, 756 |
| BstSLI | GKGCMC | 1 cut(s) | 726 |
| BstUI | CGCG | 1 cut(s) | 177 |
| BstV1I | GCAGC | 3 cut(s) | 670, 760, 840 |
| BstX2I | RGATCY | 2 cut(s) | 116, 361 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 113, 618 |
| BstYI | RGATCY | 2 cut(s) | 116, 361 |
| BsuI | GTATCC | 1 cut(s) | 764 |
| BsuRI | GGCC | 1 cut(s) | 243 |
| BtsCI | GGATG | 2 cut(s) | 34, 180 |
| BtsIMutI | CAGTG | 2 cut(s) | 660, 669 |
| BveI | ACCTGC | 1 cut(s) | 550 |
| Cac8I | GCNNGC | 1 cut(s) | 688 |
| CfoI | GCGC | 4 cut(s) | 66, 177, 263, 559 |
| Cfr13I | GGNCC | 1 cut(s) | 241 |
| CseI | GACGC | 1 cut(s) | 299 |
| CsiI | ACCWGGT | 1 cut(s) | 136 |
| Csp6I | GTAC | 2 cut(s) | 381, 827 |
| CviAII | CATG | 2 cut(s) | 43, 498 |
| CviQI | GTAC | 2 cut(s) | 381, 827 |
| DdeI | CTNAG | 3 cut(s) | 457, 663, 749 |
| DpnI | GATC | 4 cut(s) | 118, 281, 363, 540 |
| DpnII | GATC | 4 cut(s) | 116, 279, 361, 538 |
| Eam1104I | CTCTTC | 3 cut(s) | 165, 271, 347 |
| EarI | CTCTTC | 3 cut(s) | 165, 271, 347 |
| EciI | GGCGGA | 1 cut(s) | 109 |
| Eco24I | GRGCYC | 1 cut(s) | 150 |
| Eco31I | GGTCTC | 1 cut(s) | 608 |
| Eco47III | AGCGCT | 1 cut(s) | 65 |
| EcoRII | CCWGG | 2 cut(s) | 136, 756 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 150 |
| FaeI | CATG | 2 cut(s) | 46, 501 |
| FatI | CATG | 2 cut(s) | 42, 497 |
| FblI | GTMKAC | 1 cut(s) | 486 |
| Fnu4HI | GCNGC | 4 cut(s) | 178, 684, 774, 854 |
| FokI | GGATG | 2 cut(s) | 41, 167 |
| FriOI | GRGCYC | 1 cut(s) | 150 |
| Fsp4HI | GCNGC | 4 cut(s) | 178, 684, 774, 854 |
| FspBI | CTAG | 4 cut(s) | 651, 803, 837, 857 |
| GlaI | GCGC | 4 cut(s) | 65, 176, 262, 558 |
| GluI | GCNGC | 4 cut(s) | 178, 684, 774, 854 |
| HaeII | RGCGCY | 2 cut(s) | 67, 264 |
| HaeIII | GGCC | 1 cut(s) | 243 |
| HapII | CCGG | 3 cut(s) | 244, 581, 693 |
| HgaI | GACGC | 1 cut(s) | 299 |
| HhaI | GCGC | 4 cut(s) | 66, 177, 263, 559 |
| Hin1I | GRCGYC | 1 cut(s) | 291 |
| Hin1II | CATG | 2 cut(s) | 46, 501 |
| Hin6I | GCGC | 4 cut(s) | 64, 175, 261, 557 |
| HinP1I | GCGC | 4 cut(s) | 64, 175, 261, 557 |
| HincII | GTYRAC | 1 cut(s) | 487 |
| HindII | GTYRAC | 1 cut(s) | 487 |
| HinfI | GANTC | 2 cut(s) | 409, 572 |
| HpaII | CCGG | 3 cut(s) | 244, 581, 693 |
| HphI | GGTGA | 4 cut(s) | 145, 302, 535, 655 |
| Hpy166II | GTNNAC | 2 cut(s) | 487, 669 |
| Hpy188I | TCNGA | 2 cut(s) | 532, 816 |
| Hpy8I | GTNNAC | 2 cut(s) | 487, 669 |
| Hpy99I | CGWCG | 3 cut(s) | 293, 299, 491 |
| HpyAV | CCTTC | 4 cut(s) | 166, 341, 342, 472 |
| HpyCH4III | ACNGT | 2 cut(s) | 491, 780 |
| HpyCH4IV | ACGT | 3 cut(s) | 716, 737, 829 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 638, 776 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 436, 563, 853 |
| HpyF3I | CTNAG | 3 cut(s) | 457, 663, 749 |
| HpySE526I | ACGT | 3 cut(s) | 716, 737, 829 |
| Hsp92I | GRCGYC | 1 cut(s) | 291 |
| Hsp92II | CATG | 2 cut(s) | 46, 501 |
| HspAI | GCGC | 4 cut(s) | 64, 175, 261, 557 |
| KpnI | GGTACC | 1 cut(s) | 384 |
| Kzo9I | GATC | 4 cut(s) | 116, 279, 361, 538 |
| LguI | GCTCTTC | 1 cut(s) | 165 |
| LmnI | GCTCC | 5 cut(s) | 37, 145, 427, 695, 784 |
| Lsp1109I | GCAGC | 3 cut(s) | 670, 760, 840 |
| LweI | GCATC | 3 cut(s) | 13, 19, 189 |
| MabI | ACCWGGT | 1 cut(s) | 136 |
| MaeI | CTAG | 4 cut(s) | 651, 803, 837, 857 |
| MaeII | ACGT | 3 cut(s) | 716, 737, 829 |
| MalI | GATC | 4 cut(s) | 118, 281, 363, 540 |
| MboI | GATC | 4 cut(s) | 116, 279, 361, 538 |
| MboII | GAAGA | 3 cut(s) | 182, 258, 364 |
| MfeI | CAATTG | 1 cut(s) | 18 |
| MflI | RGATCY | 2 cut(s) | 116, 361 |
| MhlI | GDGCHC | 2 cut(s) | 150, 726 |
| MluCI | AATT | 6 cut(s) | 13, 18, 202, 210, 706, 788 |
| MmeI | TCCRAC | 3 cut(s) | 72, 631, 762 |
| MnlI | CCTC | 6 cut(s) | 83, 85, 157, 160, 274, 348 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 2 cut(s) | 209, 285 |
| MslI | CAYNNNNRTG | 6 cut(s) | 41, 111, 275, 315, 581, 638 |
| MspI | CCGG | 3 cut(s) | 244, 581, 693 |
| MspR9I | CCNGG | 3 cut(s) | 138, 245, 758 |
| MunI | CAATTG | 1 cut(s) | 18 |
| MvaI | CCWGG | 2 cut(s) | 138, 758 |
| MvnI | CGCG | 1 cut(s) | 177 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 436, 563, 853 |
| NciI | CCSGG | 1 cut(s) | 245 |
| NdeII | GATC | 4 cut(s) | 116, 279, 361, 538 |
| NlaIII | CATG | 2 cut(s) | 46, 501 |
| NlaIV | GGNNCC | 6 cut(s) | 118, 147, 363, 382, 691, 723 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 46 |
| PaqCI | CACCTGC | 1 cut(s) | 550 |
| PciI | ACATGT | 1 cut(s) | 42 |
| PciSI | GCTCTTC | 1 cut(s) | 165 |
| PfeI | GAWTC | 2 cut(s) | 409, 572 |
| PflFI | GACNNNGTC | 1 cut(s) | 293 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 319 |
| PkrI | GCNGC | 4 cut(s) | 179, 685, 775, 855 |
| PscI | ACATGT | 1 cut(s) | 42 |
| Psp6I | CCWGG | 2 cut(s) | 136, 756 |
| PspGI | CCWGG | 2 cut(s) | 136, 756 |
| PspN4I | GGNNCC | 6 cut(s) | 118, 147, 363, 382, 691, 723 |
| PspPI | GGNCC | 1 cut(s) | 241 |
| PsuI | RGATCY | 2 cut(s) | 116, 361 |
| PsyI | GACNNNGTC | 1 cut(s) | 293 |
| RsaI | GTAC | 2 cut(s) | 382, 828 |
| RsaNI | GTAC | 2 cut(s) | 381, 827 |
| RseI | CAYNNNNRTG | 6 cut(s) | 41, 111, 275, 315, 581, 638 |
| SalI | GTCGAC | 1 cut(s) | 485 |
| SapI | GCTCTTC | 1 cut(s) | 165 |
| SaqAI | TTAA | 2 cut(s) | 209, 285 |
| SatI | GCNGC | 4 cut(s) | 178, 684, 774, 854 |
| Sau3AI | GATC | 4 cut(s) | 116, 279, 361, 538 |
| Sau96I | GGNCC | 1 cut(s) | 241 |
| ScrFI | CCNGG | 3 cut(s) | 138, 245, 758 |
| SduI | GDGCHC | 2 cut(s) | 150, 726 |
| SexAI | ACCWGGT | 1 cut(s) | 136 |
| SfaNI | GCATC | 3 cut(s) | 13, 19, 189 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 41, 111, 275, 315, 581, 638 |
| Sse9I | AATT | 6 cut(s) | 13, 18, 202, 210, 706, 788 |
| SsiI | CCGC | 2 cut(s) | 120, 177 |
| SspMI | CTAG | 4 cut(s) | 651, 803, 837, 857 |
| StyD4I | CCNGG | 3 cut(s) | 136, 243, 756 |
| TaaI | ACNGT | 2 cut(s) | 491, 780 |
| TaiI | ACGT | 3 cut(s) | 719, 740, 832 |
| TaqI | TCGA | 1 cut(s) | 486 |
| TasI | AATT | 6 cut(s) | 13, 18, 202, 210, 706, 788 |
| TauI | GCSGC | 1 cut(s) | 180 |
| TfiI | GAWTC | 2 cut(s) | 409, 572 |
| Tru1I | TTAA | 2 cut(s) | 209, 285 |
| Tru9I | TTAA | 2 cut(s) | 209, 285 |
| TscAI | CASTG | 2 cut(s) | 667, 676 |
| TseI | GCWGC | 3 cut(s) | 683, 773, 853 |
| TspDTI | ATGAA | 1 cut(s) | 486 |
| TspRI | CASTG | 2 cut(s) | 667, 676 |
| Tth111I | GACNNNGTC | 1 cut(s) | 293 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 319 |
| XceI | RCATGY | 1 cut(s) | 46 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 320, 373 |
| XmiI | GTMKAC | 1 cut(s) | 486 |
| XspI | CTAG | 4 cut(s) | 651, 803, 837, 857 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |