ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1605 |
| AclWI | GGATC | 3 cut(s) | 129, 1190, 1500 |
| AcsI | RAATTY | 4 cut(s) | 352, 385, 497, 1100 |
| AcuI | CTGAAG | 2 cut(s) | 926, 1053 |
| AfaI | GTAC | 3 cut(s) | 51, 949, 1168 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 870, 1036, 1068, 1546, 1605 |
| AflIII | ACRYGT | 3 cut(s) | 1006, 1155, 1169 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 475 |
| AjnI | CCWGG | 3 cut(s) | 81, 460, 1292 |
| AleI | CACNNNNGTG | 1 cut(s) | 368 |
| AluBI | AGCT | 8 cut(s) | 77, 401, 782, 811, 910, 961, 1148, 1232 |
| AluI | AGCT | 8 cut(s) | 77, 401, 782, 811, 910, 961, 1148, 1232 |
| Alw21I | GWGCWC | 2 cut(s) | 79, 1278 |
| Alw26I | GTCTC | 2 cut(s) | 483, 1146 |
| Alw44I | GTGCAC | 1 cut(s) | 1274 |
| AlwI | GGATC | 3 cut(s) | 129, 1190, 1500 |
| AoxI | GGCC | 2 cut(s) | 463, 861 |
| ApaLI | GTGCAC | 1 cut(s) | 1274 |
| ApoI | RAATTY | 4 cut(s) | 352, 385, 497, 1100 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 546, 1477 |
| AspS9I | GGNCC | 1 cut(s) | 312 |
| AsuC2I | CCSGG | 1 cut(s) | 750 |
| AsuHPI | GGTGA | 1 cut(s) | 450 |
| AsuII | TTCGAA | 1 cut(s) | 329 |
| AsuNHI | GCTAGC | 1 cut(s) | 397 |
| AvaII | GGWCC | 1 cut(s) | 312 |
| BaeGI | GKGCMC | 1 cut(s) | 1278 |
| BanII | GRGCYC | 1 cut(s) | 79 |
| BbsI | GAAGAC | 1 cut(s) | 978 |
| Bbv12I | GWGCWC | 2 cut(s) | 79, 1278 |
| BccI | CCATC | 5 cut(s) | 192, 236, 243, 938, 1257 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1167, 1201 |
| BciT130I | CCWGG | 3 cut(s) | 83, 462, 1294 |
| BciVI | GTATCC | 1 cut(s) | 1455 |
| BclI | TGATCA | 1 cut(s) | 1579 |
| BcnI | CCSGG | 1 cut(s) | 750 |
| BcoDI | GTCTC | 2 cut(s) | 483, 1146 |
| BfaI | CTAG | 6 cut(s) | 398, 467, 776, 962, 1149, 1323 |
| BfmI | CTRYAG | 1 cut(s) | 237 |
| BfuI | GTATCC | 1 cut(s) | 1455 |
| Bme1390I | CCNGG | 4 cut(s) | 83, 462, 750, 1294 |
| Bme18I | GGWCC | 1 cut(s) | 312 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 475 |
| BmgT120I | GGNCC | 1 cut(s) | 312 |
| BmrFI | CCNGG | 4 cut(s) | 83, 462, 750, 1294 |
| BmsI | GCATC | 4 cut(s) | 16, 454, 683, 1187 |
| BmtI | GCTAGC | 1 cut(s) | 401 |
| BpiI | GAAGAC | 1 cut(s) | 978 |
| BpmI | CTGGAG | 3 cut(s) | 65, 145, 1487 |
| Bpu14I | TTCGAA | 1 cut(s) | 329 |
| BpuMI | CCSGG | 1 cut(s) | 750 |
| Bsa29I | ATCGAT | 1 cut(s) | 288 |
| BsaJI | CCNNGG | 1 cut(s) | 678 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 693, 723 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 870, 1036, 1068, 1546, 1605 |
| Bse118I | RCCGGY | 1 cut(s) | 816 |
| Bse1I | ACTGG | 3 cut(s) | 128, 559, 1470 |
| BseBI | CCWGG | 3 cut(s) | 83, 462, 1294 |
| BseCI | ATCGAT | 1 cut(s) | 288 |
| BseDI | CCNNGG | 1 cut(s) | 678 |
| BseGI | GGATG | 7 cut(s) | 31, 258, 445, 674, 705, 1045, 1268 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 870, 1036, 1068, 1546, 1605 |
| BseNI | ACTGG | 3 cut(s) | 128, 559, 1470 |
| BseRI | GAGGAG | 2 cut(s) | 717, 916 |
| BseSI | GKGCMC | 1 cut(s) | 1278 |
| BseYI | CCCAGC | 1 cut(s) | 910 |
| BshFI | GGCC | 2 cut(s) | 465, 863 |
| BshVI | ATCGAT | 1 cut(s) | 288 |
| BsiHKAI | GWGCWC | 2 cut(s) | 79, 1278 |
| BsiSI | CCGG | 2 cut(s) | 749, 817 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 870, 1036, 1068, 1546, 1605 |
| BsmAI | GTCTC | 2 cut(s) | 483, 1146 |
| BsmI | GAATGC | 3 cut(s) | 337, 740, 1000 |
| BsnI | GGCC | 2 cut(s) | 465, 863 |
| Bsp119I | TTCGAA | 1 cut(s) | 329 |
| Bsp1286I | GDGCHC | 2 cut(s) | 79, 1278 |
| Bsp143I | GATC | 6 cut(s) | 134, 163, 285, 1195, 1492, 1579 |
| BspANI | GGCC | 2 cut(s) | 465, 863 |
| BspDI | ATCGAT | 1 cut(s) | 288 |
| BspHI | TCATGA | 3 cut(s) | 568, 801, 1576 |
| BspOI | GCTAGC | 1 cut(s) | 401 |
| BspPI | GGATC | 3 cut(s) | 129, 1190, 1500 |
| BspT104I | TTCGAA | 1 cut(s) | 329 |
| BsrFI | RCCGGY | 1 cut(s) | 816 |
| BsrI | ACTGG | 3 cut(s) | 128, 559, 1470 |
| BssAI | RCCGGY | 1 cut(s) | 816 |
| BssECI | CCNNGG | 1 cut(s) | 678 |
| BssMI | GATC | 6 cut(s) | 134, 163, 285, 1195, 1492, 1579 |
| BssT1I | CCWWGG | 1 cut(s) | 678 |
| Bst2UI | CCWGG | 3 cut(s) | 83, 462, 1294 |
| Bst4CI | ACNGT | 1 cut(s) | 1337 |
| Bst6I | CTCTTC | 2 cut(s) | 735, 1444 |
| BstBI | TTCGAA | 1 cut(s) | 329 |
| BstC8I | GCNNGC | 3 cut(s) | 399, 818, 1269 |
| BstDEI | CTNAG | 2 cut(s) | 1064, 1366 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 868 |
| BstF5I | GGATG | 7 cut(s) | 31, 258, 445, 674, 705, 1045, 1268 |
| BstKTI | GATC | 6 cut(s) | 137, 166, 288, 1198, 1495, 1582 |
| BstMAI | GTCTC | 2 cut(s) | 483, 1146 |
| BstMBI | GATC | 6 cut(s) | 134, 163, 285, 1195, 1492, 1579 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 817, 1273 |
| BstNI | CCWGG | 3 cut(s) | 83, 462, 1294 |
| BstNSI | RCATGY | 3 cut(s) | 1010, 1159, 1173 |
| BstSCI | CCNGG | 4 cut(s) | 81, 460, 748, 1292 |
| BstSFI | CTRYAG | 1 cut(s) | 237 |
| BstSLI | GKGCMC | 1 cut(s) | 1278 |
| BstV2I | GAAGAC | 1 cut(s) | 978 |
| BstX2I | RGATCY | 2 cut(s) | 134, 1492 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 685 |
| BstYI | RGATCY | 2 cut(s) | 134, 1492 |
| Bsu15I | ATCGAT | 1 cut(s) | 288 |
| BsuI | GTATCC | 1 cut(s) | 1455 |
| BsuRI | GGCC | 2 cut(s) | 465, 863 |
| BsuTUI | ATCGAT | 1 cut(s) | 288 |
| BtsCI | GGATG | 7 cut(s) | 31, 258, 445, 674, 705, 1045, 1268 |
| BtsI | GCAGTG | 1 cut(s) | 1278 |
| BtsIMutI | CAGTG | 2 cut(s) | 552, 1278 |
| Cac8I | GCNNGC | 3 cut(s) | 399, 818, 1269 |
| CciI | TCATGA | 3 cut(s) | 568, 801, 1576 |
| Cfr10I | RCCGGY | 1 cut(s) | 816 |
| Cfr13I | GGNCC | 1 cut(s) | 312 |
| ClaI | ATCGAT | 1 cut(s) | 288 |
| CsiI | ACCWGGT | 1 cut(s) | 1292 |
| Csp6I | GTAC | 3 cut(s) | 50, 948, 1167 |
| CviQI | GTAC | 3 cut(s) | 50, 948, 1167 |
| DdeI | CTNAG | 2 cut(s) | 1064, 1366 |
| DpnI | GATC | 6 cut(s) | 136, 165, 287, 1197, 1494, 1581 |
| DpnII | GATC | 6 cut(s) | 134, 163, 285, 1195, 1492, 1579 |
| DraI | TTTAAA | 1 cut(s) | 1332 |
| DriI | GACNNNNNGTC | 1 cut(s) | 475 |
| Eam1104I | CTCTTC | 2 cut(s) | 735, 1444 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 475 |
| EarI | CTCTTC | 2 cut(s) | 735, 1444 |
| Ecl136II | GAGCTC | 1 cut(s) | 77 |
| Eco130I | CCWWGG | 1 cut(s) | 678 |
| Eco147I | AGGCCT | 2 cut(s) | 465, 863 |
| Eco24I | GRGCYC | 1 cut(s) | 79 |
| Eco32I | GATATC | 1 cut(s) | 723 |
| Eco47I | GGWCC | 1 cut(s) | 312 |
| Eco53kI | GAGCTC | 1 cut(s) | 77 |
| Eco57I | CTGAAG | 2 cut(s) | 926, 1053 |
| EcoICRI | GAGCTC | 1 cut(s) | 77 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 868 |
| EcoRI | GAATTC | 1 cut(s) | 352 |
| EcoRII | CCWGG | 3 cut(s) | 81, 460, 1292 |
| EcoRV | GATATC | 1 cut(s) | 723 |
| EcoT14I | CCWWGG | 1 cut(s) | 678 |
| EcoT22I | ATGCAT | 1 cut(s) | 742 |
| EcoT38I | GRGCYC | 1 cut(s) | 79 |
| ErhI | CCWWGG | 1 cut(s) | 678 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 885, 917, 1406, 1438 |
| FbaI | TGATCA | 1 cut(s) | 1579 |
| FokI | GGATG | 7 cut(s) | 38, 265, 432, 661, 692, 1052, 1275 |
| FriOI | GRGCYC | 1 cut(s) | 79 |
| FspBI | CTAG | 6 cut(s) | 398, 467, 776, 962, 1149, 1323 |
| GsaI | CCCAGC | 1 cut(s) | 914 |
| GsuI | CTGGAG | 3 cut(s) | 65, 145, 1487 |
| HaeIII | GGCC | 2 cut(s) | 465, 863 |
| HapII | CCGG | 2 cut(s) | 749, 817 |
| HincII | GTYRAC | 1 cut(s) | 1349 |
| HindII | GTYRAC | 1 cut(s) | 1349 |
| HindIII | AAGCTT | 1 cut(s) | 809 |
| HinfI | GANTC | 7 cut(s) | 10, 326, 572, 598, 983, 1361, 1573 |
| HpaII | CCGG | 2 cut(s) | 749, 817 |
| HphI | GGTGA | 1 cut(s) | 450 |
| Hpy166II | GTNNAC | 3 cut(s) | 664, 1276, 1349 |
| Hpy188III | TCNNGA | 5 cut(s) | 569, 802, 1225, 1396, 1577 |
| Hpy8I | GTNNAC | 3 cut(s) | 664, 1276, 1349 |
| Hpy99I | CGWCG | 1 cut(s) | 207 |
| HpyAV | CCTTC | 5 cut(s) | 557, 911, 1210, 1306, 1432 |
| HpyCH4III | ACNGT | 1 cut(s) | 1337 |
| HpyCH4IV | ACGT | 1 cut(s) | 593 |
| HpyCH4V | TGCA | 7 cut(s) | 29, 654, 674, 740, 1178, 1276, 1383 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 817, 1273 |
| HpyF3I | CTNAG | 2 cut(s) | 1064, 1366 |
| HpySE526I | ACGT | 1 cut(s) | 593 |
| KroI | GCCGGC | 1 cut(s) | 816 |
| KroNI | GCCGGC | 1 cut(s) | 818 |
| Ksp22I | TGATCA | 1 cut(s) | 1579 |
| Kzo9I | GATC | 6 cut(s) | 134, 163, 285, 1195, 1492, 1579 |
| LmnI | GCTCC | 1 cut(s) | 406 |
| LweI | GCATC | 4 cut(s) | 16, 454, 683, 1187 |
| MabI | ACCWGGT | 1 cut(s) | 1292 |
| MaeI | CTAG | 6 cut(s) | 398, 467, 776, 962, 1149, 1323 |
| MaeII | ACGT | 1 cut(s) | 593 |
| MaeIII | GTNAC | 4 cut(s) | 167, 370, 752, 822 |
| MalI | GATC | 6 cut(s) | 136, 165, 287, 1197, 1494, 1581 |
| MboI | GATC | 6 cut(s) | 134, 163, 285, 1195, 1492, 1579 |
| MboII | GAAGA | 7 cut(s) | 77, 722, 826, 978, 1274, 1431, 1470 |
| MfeI | CAATTG | 1 cut(s) | 507 |
| MflI | RGATCY | 2 cut(s) | 134, 1492 |
| MhlI | GDGCHC | 2 cut(s) | 79, 1278 |
| MlyI | GAGTC | 3 cut(s) | 581, 992, 1370 |
| MmeI | TCCRAC | 1 cut(s) | 944 |
| Mph1103I | ATGCAT | 1 cut(s) | 742 |
| MroNI | GCCGGC | 1 cut(s) | 816 |
| MroXI | GAANNNNTTC | 2 cut(s) | 546, 1477 |
| MslI | CAYNNNNRTG | 2 cut(s) | 368, 1005 |
| MspI | CCGG | 2 cut(s) | 749, 817 |
| MspR9I | CCNGG | 4 cut(s) | 83, 462, 750, 1294 |
| MunI | CAATTG | 1 cut(s) | 507 |
| Mva1269I | GAATGC | 3 cut(s) | 337, 740, 1000 |
| MvaI | CCWGG | 3 cut(s) | 83, 462, 1294 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 817, 1273 |
| NaeI | GCCGGC | 1 cut(s) | 818 |
| NciI | CCSGG | 1 cut(s) | 750 |
| NdeII | GATC | 6 cut(s) | 134, 163, 285, 1195, 1492, 1579 |
| NgoMIV | GCCGGC | 1 cut(s) | 816 |
| NheI | GCTAGC | 1 cut(s) | 397 |
| NmuCI | GTSAC | 2 cut(s) | 370, 752 |
| NsiI | ATGCAT | 1 cut(s) | 742 |
| NspI | RCATGY | 3 cut(s) | 1010, 1159, 1173 |
| NspV | TTCGAA | 1 cut(s) | 329 |
| OliI | CACNNNNGTG | 1 cut(s) | 368 |
| PagI | TCATGA | 3 cut(s) | 568, 801, 1576 |
| PceI | AGGCCT | 2 cut(s) | 465, 863 |
| PciI | ACATGT | 3 cut(s) | 1006, 1155, 1169 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 208 |
| PctI | GAATGC | 3 cut(s) | 337, 740, 1000 |
| PdiI | GCCGGC | 1 cut(s) | 818 |
| PdmI | GAANNNNTTC | 2 cut(s) | 546, 1477 |
| PfeI | GAWTC | 4 cut(s) | 10, 326, 598, 1573 |
| PflFI | GACNNNGTC | 1 cut(s) | 207 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1605 |
| PleI | GAGTC | 3 cut(s) | 580, 991, 1369 |
| PpsI | GAGTC | 3 cut(s) | 580, 991, 1369 |
| PscI | ACATGT | 3 cut(s) | 1006, 1155, 1169 |
| Psp124BI | GAGCTC | 1 cut(s) | 79 |
| Psp6I | CCWGG | 3 cut(s) | 81, 460, 1292 |
| PspFI | CCCAGC | 1 cut(s) | 910 |
| PspGI | CCWGG | 3 cut(s) | 81, 460, 1292 |
| PspPI | GGNCC | 1 cut(s) | 312 |
| PsuI | RGATCY | 2 cut(s) | 134, 1492 |
| PsyI | GACNNNGTC | 1 cut(s) | 207 |
| RsaI | GTAC | 3 cut(s) | 51, 949, 1168 |
| RsaNI | GTAC | 3 cut(s) | 50, 948, 1167 |
| RseI | CAYNNNNRTG | 2 cut(s) | 368, 1005 |
| SacI | GAGCTC | 1 cut(s) | 79 |
| Sau3AI | GATC | 6 cut(s) | 134, 163, 285, 1195, 1492, 1579 |
| Sau96I | GGNCC | 1 cut(s) | 312 |
| SchI | GAGTC | 3 cut(s) | 581, 992, 1370 |
| ScrFI | CCNGG | 4 cut(s) | 83, 462, 750, 1294 |
| SduI | GDGCHC | 2 cut(s) | 79, 1278 |
| SexAI | ACCWGGT | 1 cut(s) | 1292 |
| SfaNI | GCATC | 4 cut(s) | 16, 454, 683, 1187 |
| SfcI | CTRYAG | 1 cut(s) | 237 |
| SfuI | TTCGAA | 1 cut(s) | 329 |
| SinI | GGWCC | 1 cut(s) | 312 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 368, 1005 |
| SseBI | AGGCCT | 2 cut(s) | 465, 863 |
| SspI | AATATT | 2 cut(s) | 304, 1528 |
| SspMI | CTAG | 6 cut(s) | 398, 467, 776, 962, 1149, 1323 |
| SstI | GAGCTC | 1 cut(s) | 79 |
| StuI | AGGCCT | 2 cut(s) | 465, 863 |
| StyD4I | CCNGG | 4 cut(s) | 81, 460, 748, 1292 |
| StyI | CCWWGG | 1 cut(s) | 678 |
| TaaI | ACNGT | 1 cut(s) | 1337 |
| TaiI | ACGT | 1 cut(s) | 596 |
| TaqI | TCGA | 8 cut(s) | 202, 211, 288, 329, 935, 1104, 1187, 1397 |
| TaqII | GACCGA | 2 cut(s) | 300, 655 |
| TfiI | GAWTC | 4 cut(s) | 10, 326, 598, 1573 |
| TscAI | CASTG | 2 cut(s) | 559, 1278 |
| TseFI | GTSAC | 2 cut(s) | 370, 752 |
| Tsp45I | GTSAC | 2 cut(s) | 370, 752 |
| TspDTI | ATGAA | 9 cut(s) | 17, 50, 312, 398, 733, 790, 818, 978, 1142 |
| TspGWI | ACGGA | 1 cut(s) | 438 |
| TspRI | CASTG | 2 cut(s) | 559, 1278 |
| Tth111I | GACNNNGTC | 1 cut(s) | 207 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1605 |
| VneI | GTGCAC | 1 cut(s) | 1274 |
| VpaK11BI | GGWCC | 1 cut(s) | 312 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 868 |
| XapI | RAATTY | 4 cut(s) | 352, 385, 497, 1100 |
| XceI | RCATGY | 3 cut(s) | 1010, 1159, 1173 |
| XmnI | GAANNNNTTC | 2 cut(s) | 546, 1477 |
| XspI | CTAG | 6 cut(s) | 398, 467, 776, 962, 1149, 1323 |
| Zsp2I | ATGCAT | 1 cut(s) | 742 |