ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 78, 150 |
| AcoI | YGGCCR | 1 cut(s) | 87 |
| AcsI | RAATTY | 2 cut(s) | 58, 293 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 165 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 50, 82 |
| Alw26I | GTCTC | 1 cut(s) | 256 |
| AlwI | GGATC | 2 cut(s) | 78, 150 |
| AoxI | GGCC | 1 cut(s) | 87 |
| ApeKI | GCWGC | 1 cut(s) | 302 |
| ApoI | RAATTY | 2 cut(s) | 58, 293 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 174 |
| BalI | TGGCCA | 1 cut(s) | 89 |
| BbvI | GCAGC | 1 cut(s) | 314 |
| BccI | CCATC | 1 cut(s) | 301 |
| BcoDI | GTCTC | 1 cut(s) | 256 |
| BfaI | CTAG | 1 cut(s) | 123 |
| BisI | GCNGC | 1 cut(s) | 303 |
| BlsI | GCNGC | 1 cut(s) | 304 |
| BmsI | GCATC | 1 cut(s) | 133 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 165 |
| BseGI | GGATG | 1 cut(s) | 247 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 165 |
| BseXI | GCAGC | 1 cut(s) | 314 |
| BshFI | GGCC | 1 cut(s) | 89 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 165 |
| BsmAI | GTCTC | 1 cut(s) | 256 |
| BsmBI | CGTCTC | 1 cut(s) | 256 |
| BsnI | GGCC | 1 cut(s) | 89 |
| Bsp143I | GATC | 3 cut(s) | 70, 155, 272 |
| BspANI | GGCC | 1 cut(s) | 89 |
| BspCNI | CTCAG | 1 cut(s) | 330 |
| BspPI | GGATC | 2 cut(s) | 78, 150 |
| BssMI | GATC | 3 cut(s) | 70, 155, 272 |
| Bst4CI | ACNGT | 1 cut(s) | 196 |
| BstDEI | CTNAG | 1 cut(s) | 317 |
| BstF5I | GGATG | 1 cut(s) | 247 |
| BstKTI | GATC | 3 cut(s) | 73, 158, 275 |
| BstMAI | GTCTC | 1 cut(s) | 256 |
| BstMBI | GATC | 3 cut(s) | 70, 155, 272 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 308 |
| BstV1I | GCAGC | 1 cut(s) | 314 |
| BstX2I | RGATCY | 1 cut(s) | 155 |
| BstYI | RGATCY | 1 cut(s) | 155 |
| BsuRI | GGCC | 1 cut(s) | 89 |
| BtgZI | GCGATG | 1 cut(s) | 320 |
| BtsCI | GGATG | 1 cut(s) | 247 |
| BtsIMutI | CAGTG | 1 cut(s) | 325 |
| CviAII | CATG | 1 cut(s) | 165 |
| CviJI | RGCY | 3 cut(s) | 89, 207, 311 |
| CviKI_1 | RGCY | 3 cut(s) | 89, 207, 311 |
| DdeI | CTNAG | 1 cut(s) | 317 |
| DpnI | GATC | 3 cut(s) | 72, 157, 274 |
| DpnII | GATC | 3 cut(s) | 70, 155, 272 |
| EaeI | YGGCCR | 1 cut(s) | 87 |
| EcoRI | GAATTC | 1 cut(s) | 58 |
| Esp3I | CGTCTC | 1 cut(s) | 256 |
| FaeI | CATG | 1 cut(s) | 168 |
| FaiI | YATR | 6 cut(s) | 75, 132, 166, 192, 326, 328 |
| FatI | CATG | 1 cut(s) | 164 |
| FauNDI | CATATG | 1 cut(s) | 326 |
| Fnu4HI | GCNGC | 1 cut(s) | 303 |
| FokI | GGATG | 1 cut(s) | 254 |
| Fsp4HI | GCNGC | 1 cut(s) | 303 |
| FspBI | CTAG | 1 cut(s) | 123 |
| GluI | GCNGC | 1 cut(s) | 303 |
| HaeIII | GGCC | 1 cut(s) | 89 |
| Hin1II | CATG | 1 cut(s) | 168 |
| HinfI | GANTC | 1 cut(s) | 286 |
| Hpy188I | TCNGA | 3 cut(s) | 57, 99, 285 |
| HpyAV | CCTTC | 1 cut(s) | 37 |
| HpyCH4III | ACNGT | 1 cut(s) | 196 |
| HpyCH4V | TGCA | 1 cut(s) | 146 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 308 |
| HpyF3I | CTNAG | 1 cut(s) | 317 |
| Hsp92II | CATG | 1 cut(s) | 168 |
| Kzo9I | GATC | 3 cut(s) | 70, 155, 272 |
| LpnPI | CCDG | 3 cut(s) | 87, 153, 193 |
| Lsp1109I | GCAGC | 1 cut(s) | 314 |
| LweI | GCATC | 1 cut(s) | 133 |
| MaeI | CTAG | 1 cut(s) | 123 |
| MaeIII | GTNAC | 1 cut(s) | 196 |
| MalI | GATC | 3 cut(s) | 72, 157, 274 |
| MboI | GATC | 3 cut(s) | 70, 155, 272 |
| MflI | RGATCY | 1 cut(s) | 155 |
| MlsI | TGGCCA | 1 cut(s) | 89 |
| MluCI | AATT | 4 cut(s) | 58, 170, 233, 293 |
| MluNI | TGGCCA | 1 cut(s) | 89 |
| MmeI | TCCRAC | 2 cut(s) | 122, 219 |
| MnlI | CCTC | 3 cut(s) | 43, 73, 326 |
| Mox20I | TGGCCA | 1 cut(s) | 89 |
| MroXI | GAANNNNTTC | 1 cut(s) | 174 |
| MscI | TGGCCA | 1 cut(s) | 89 |
| MseI | TTAA | 1 cut(s) | 228 |
| Msp20I | TGGCCA | 1 cut(s) | 89 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 308 |
| NdeI | CATATG | 1 cut(s) | 326 |
| NdeII | GATC | 3 cut(s) | 70, 155, 272 |
| NlaIII | CATG | 1 cut(s) | 168 |
| NmuCI | GTSAC | 1 cut(s) | 196 |
| PdmI | GAANNNNTTC | 1 cut(s) | 174 |
| PfeI | GAWTC | 1 cut(s) | 286 |
| PkrI | GCNGC | 1 cut(s) | 304 |
| PsuI | RGATCY | 1 cut(s) | 155 |
| SaqAI | TTAA | 1 cut(s) | 228 |
| SatI | GCNGC | 1 cut(s) | 303 |
| Sau3AI | GATC | 3 cut(s) | 70, 155, 272 |
| SetI | ASST | 3 cut(s) | 13, 48, 128 |
| SfaNI | GCATC | 1 cut(s) | 133 |
| SgeI | CNNG | 9 cut(s) | 94, 114, 135, 152, 177, 220, 232, 278, 311 |
| Sse9I | AATT | 4 cut(s) | 58, 170, 233, 293 |
| SspMI | CTAG | 1 cut(s) | 123 |
| TaaI | ACNGT | 1 cut(s) | 196 |
| TasI | AATT | 4 cut(s) | 58, 170, 233, 293 |
| TfiI | GAWTC | 1 cut(s) | 286 |
| Tru1I | TTAA | 1 cut(s) | 228 |
| Tru9I | TTAA | 1 cut(s) | 228 |
| TscAI | CASTG | 1 cut(s) | 325 |
| TseFI | GTSAC | 1 cut(s) | 196 |
| TseI | GCWGC | 1 cut(s) | 302 |
| Tsp45I | GTSAC | 1 cut(s) | 196 |
| TspDTI | ATGAA | 2 cut(s) | 153, 246 |
| TspRI | CASTG | 1 cut(s) | 325 |
| XapI | RAATTY | 2 cut(s) | 58, 293 |
| XmnI | GAANNNNTTC | 1 cut(s) | 174 |
| XspI | CTAG | 1 cut(s) | 123 |