ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 320 |
| AclWI | GGATC | 3 cut(s) | 216, 314, 561 |
| AcoI | YGGCCR | 1 cut(s) | 557 |
| AcuI | CTGAAG | 1 cut(s) | 372 |
| AfaI | GTAC | 3 cut(s) | 37, 360, 513 |
| AgsI | TTSAA | 3 cut(s) | 50, 385, 431 |
| AhlI | ACTAGT | 1 cut(s) | 32 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 107, 139 |
| AluBI | AGCT | 4 cut(s) | 166, 443, 481, 538 |
| AluI | AGCT | 4 cut(s) | 166, 443, 481, 538 |
| Alw21I | GWGCWC | 1 cut(s) | 483 |
| Alw26I | GTCTC | 2 cut(s) | 8, 208 |
| AlwI | GGATC | 3 cut(s) | 216, 314, 561 |
| AoxI | GGCC | 1 cut(s) | 557 |
| ApeKI | GCWGC | 2 cut(s) | 163, 166 |
| BaeGI | GKGCMC | 1 cut(s) | 410 |
| BanII | GRGCYC | 1 cut(s) | 483 |
| Bbv12I | GWGCWC | 1 cut(s) | 483 |
| BbvI | GCAGC | 2 cut(s) | 153, 175 |
| BccI | CCATC | 2 cut(s) | 135, 239 |
| BciVI | GTATCC | 1 cut(s) | 87 |
| BcoDI | GTCTC | 2 cut(s) | 8, 208 |
| BcuI | ACTAGT | 1 cut(s) | 32 |
| BfaI | CTAG | 3 cut(s) | 33, 371, 437 |
| BfmI | CTRYAG | 1 cut(s) | 98 |
| BfuAI | ACCTGC | 1 cut(s) | 320 |
| BfuI | GTATCC | 1 cut(s) | 87 |
| BisI | GCNGC | 2 cut(s) | 164, 167 |
| BlsI | GCNGC | 2 cut(s) | 165, 168 |
| BmcAI | AGTACT | 1 cut(s) | 37 |
| Bse1I | ACTGG | 2 cut(s) | 519, 555 |
| BseGI | GGATG | 3 cut(s) | 127, 243, 250 |
| BseNI | ACTGG | 2 cut(s) | 519, 555 |
| BseRI | GAGGAG | 1 cut(s) | 129 |
| BseSI | GKGCMC | 1 cut(s) | 410 |
| BseXI | GCAGC | 2 cut(s) | 153, 175 |
| BshFI | GGCC | 1 cut(s) | 559 |
| BsiHKAI | GWGCWC | 1 cut(s) | 483 |
| BslFI | GGGAC | 1 cut(s) | 109 |
| BsmAI | GTCTC | 2 cut(s) | 8, 208 |
| BsmFI | GGGAC | 1 cut(s) | 109 |
| BsmI | GAATGC | 1 cut(s) | 366 |
| BsnI | GGCC | 1 cut(s) | 559 |
| Bsp1286I | GDGCHC | 2 cut(s) | 410, 483 |
| Bsp143I | GATC | 4 cut(s) | 21, 221, 306, 553 |
| BspANI | GGCC | 1 cut(s) | 559 |
| BspMI | ACCTGC | 1 cut(s) | 320 |
| BspPI | GGATC | 3 cut(s) | 216, 314, 561 |
| BsrI | ACTGG | 2 cut(s) | 519, 555 |
| BssMI | GATC | 4 cut(s) | 21, 221, 306, 553 |
| Bst4CI | ACNGT | 2 cut(s) | 147, 506 |
| BstF5I | GGATG | 3 cut(s) | 127, 243, 250 |
| BstKTI | GATC | 4 cut(s) | 24, 224, 309, 556 |
| BstMAI | GTCTC | 2 cut(s) | 8, 208 |
| BstMBI | GATC | 4 cut(s) | 21, 221, 306, 553 |
| BstNSI | RCATGY | 1 cut(s) | 173 |
| BstSFI | CTRYAG | 1 cut(s) | 98 |
| BstSLI | GKGCMC | 1 cut(s) | 410 |
| BstV1I | GCAGC | 2 cut(s) | 153, 175 |
| BstX2I | RGATCY | 1 cut(s) | 221 |
| BstYI | RGATCY | 1 cut(s) | 221 |
| BsuI | GTATCC | 1 cut(s) | 87 |
| BsuRI | GGCC | 1 cut(s) | 559 |
| BtsCI | GGATG | 3 cut(s) | 127, 243, 250 |
| BtsIMutI | CAGTG | 2 cut(s) | 511, 548 |
| BveI | ACCTGC | 1 cut(s) | 320 |
| Csp6I | GTAC | 3 cut(s) | 36, 359, 512 |
| CviAII | CATG | 2 cut(s) | 121, 170 |
| CviJI | RGCY | 7 cut(s) | 166, 264, 315, 443, 481, 538, 559 |
| CviKI_1 | RGCY | 7 cut(s) | 166, 264, 315, 443, 481, 538, 559 |
| CviQI | GTAC | 3 cut(s) | 36, 359, 512 |
| DpnI | GATC | 4 cut(s) | 23, 223, 308, 555 |
| DpnII | GATC | 4 cut(s) | 21, 221, 306, 553 |
| EaeI | YGGCCR | 1 cut(s) | 557 |
| Ecl136II | GAGCTC | 1 cut(s) | 481 |
| Eco24I | GRGCYC | 1 cut(s) | 483 |
| Eco53kI | GAGCTC | 1 cut(s) | 481 |
| Eco57I | CTGAAG | 1 cut(s) | 372 |
| EcoICRI | GAGCTC | 1 cut(s) | 481 |
| EcoT38I | GRGCYC | 1 cut(s) | 483 |
| FaeI | CATG | 2 cut(s) | 124, 173 |
| FaqI | GGGAC | 1 cut(s) | 109 |
| FatI | CATG | 2 cut(s) | 120, 169 |
| Fnu4HI | GCNGC | 2 cut(s) | 164, 167 |
| FokI | GGATG | 3 cut(s) | 114, 250, 257 |
| FriOI | GRGCYC | 1 cut(s) | 483 |
| Fsp4HI | GCNGC | 2 cut(s) | 164, 167 |
| FspBI | CTAG | 3 cut(s) | 33, 371, 437 |
| GluI | GCNGC | 2 cut(s) | 164, 167 |
| HaeIII | GGCC | 1 cut(s) | 559 |
| Hin1II | CATG | 2 cut(s) | 124, 173 |
| HindIII | AAGCTT | 1 cut(s) | 536 |
| Hpy188III | TCNNGA | 1 cut(s) | 437 |
| HpyAV | CCTTC | 1 cut(s) | 235 |
| HpyCH4III | ACNGT | 2 cut(s) | 147, 506 |
| HpyCH4IV | ACGT | 1 cut(s) | 230 |
| HpyCH4V | TGCA | 5 cut(s) | 169, 194, 376, 464, 548 |
| HpySE526I | ACGT | 1 cut(s) | 230 |
| Hsp92II | CATG | 2 cut(s) | 124, 173 |
| Kzo9I | GATC | 4 cut(s) | 21, 221, 306, 553 |
| LmnI | GCTCC | 1 cut(s) | 478 |
| LpnPI | CCDG | 8 cut(s) | 86, 182, 246, 289, 315, 363, 500, 536 |
| Lsp1109I | GCAGC | 2 cut(s) | 153, 175 |
| MaeI | CTAG | 3 cut(s) | 33, 371, 437 |
| MaeII | ACGT | 1 cut(s) | 230 |
| MaeIII | GTNAC | 2 cut(s) | 186, 457 |
| MalI | GATC | 4 cut(s) | 23, 223, 308, 555 |
| MboI | GATC | 4 cut(s) | 21, 221, 306, 553 |
| MboII | GAAGA | 3 cut(s) | 118, 124, 212 |
| MfeI | CAATTG | 2 cut(s) | 8, 41 |
| MflI | RGATCY | 1 cut(s) | 221 |
| MhlI | GDGCHC | 2 cut(s) | 410, 483 |
| MluCI | AATT | 3 cut(s) | 8, 41, 472 |
| MnlI | CCTC | 3 cut(s) | 84, 150, 409 |
| MseI | TTAA | 2 cut(s) | 317, 453 |
| MslI | CAYNNNNRTG | 1 cut(s) | 371 |
| MspA1I | CMGCKG | 1 cut(s) | 166 |
| MunI | CAATTG | 2 cut(s) | 8, 41 |
| Mva1269I | GAATGC | 1 cut(s) | 366 |
| NdeII | GATC | 4 cut(s) | 21, 221, 306, 553 |
| NlaIII | CATG | 2 cut(s) | 124, 173 |
| NspI | RCATGY | 1 cut(s) | 173 |
| PctI | GAATGC | 1 cut(s) | 366 |
| PkrI | GCNGC | 2 cut(s) | 165, 168 |
| Psp124BI | GAGCTC | 1 cut(s) | 483 |
| PsuI | RGATCY | 1 cut(s) | 221 |
| PvuII | CAGCTG | 1 cut(s) | 166 |
| RsaI | GTAC | 3 cut(s) | 37, 360, 513 |
| RsaNI | GTAC | 3 cut(s) | 36, 359, 512 |
| RseI | CAYNNNNRTG | 1 cut(s) | 371 |
| SacI | GAGCTC | 1 cut(s) | 483 |
| SaqAI | TTAA | 2 cut(s) | 317, 453 |
| SatI | GCNGC | 2 cut(s) | 164, 167 |
| Sau3AI | GATC | 4 cut(s) | 21, 221, 306, 553 |
| ScaI | AGTACT | 1 cut(s) | 37 |
| SduI | GDGCHC | 2 cut(s) | 410, 483 |
| SetI | ASST | 9 cut(s) | 168, 233, 334, 352, 391, 401, 445, 483, 540 |
| SfcI | CTRYAG | 1 cut(s) | 98 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 371 |
| SpeI | ACTAGT | 1 cut(s) | 32 |
| Sse9I | AATT | 3 cut(s) | 8, 41, 472 |
| SspMI | CTAG | 3 cut(s) | 33, 371, 437 |
| SstI | GAGCTC | 1 cut(s) | 483 |
| TaaI | ACNGT | 2 cut(s) | 147, 506 |
| TaiI | ACGT | 1 cut(s) | 233 |
| TaqI | TCGA | 1 cut(s) | 175 |
| TasI | AATT | 3 cut(s) | 8, 41, 472 |
| TatI | WGTACW | 2 cut(s) | 35, 358 |
| Tru1I | TTAA | 2 cut(s) | 317, 453 |
| Tru9I | TTAA | 2 cut(s) | 317, 453 |
| TscAI | CASTG | 2 cut(s) | 511, 555 |
| TseI | GCWGC | 2 cut(s) | 163, 166 |
| TspDTI | ATGAA | 6 cut(s) | 17, 125, 168, 254, 339, 485 |
| TspRI | CASTG | 2 cut(s) | 511, 555 |
| XbaI | TCTAGA | 1 cut(s) | 436 |
| XceI | RCATGY | 1 cut(s) | 173 |
| XspI | CTAG | 3 cut(s) | 33, 371, 437 |
| ZrmI | AGTACT | 1 cut(s) | 37 |