ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 3 cut(s) | 325, 437, 456 |
| AciI | CCGC | 1 cut(s) | 301 |
| AclI | AACGTT | 1 cut(s) | 352 |
| AcsI | RAATTY | 1 cut(s) | 410 |
| AfaI | GTAC | 1 cut(s) | 379 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 203, 267, 337 |
| AluBI | AGCT | 1 cut(s) | 128 |
| AluI | AGCT | 1 cut(s) | 128 |
| Alw26I | GTCTC | 1 cut(s) | 249 |
| AoxI | GGCC | 2 cut(s) | 332, 404 |
| ApoI | RAATTY | 1 cut(s) | 410 |
| AspLEI | GCGC | 1 cut(s) | 82 |
| AspS9I | GGNCC | 1 cut(s) | 404 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 218 |
| BccI | CCATC | 1 cut(s) | 152 |
| BcoDI | GTCTC | 1 cut(s) | 249 |
| BfaI | CTAG | 1 cut(s) | 460 |
| BfmI | CTRYAG | 1 cut(s) | 123 |
| BfoI | RGCGCY | 1 cut(s) | 83 |
| BmgT120I | GGNCC | 1 cut(s) | 404 |
| BmrI | ACTGGG | 1 cut(s) | 411 |
| BmuI | ACTGGG | 1 cut(s) | 411 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 229, 261 |
| Bsa29I | ATCGAT | 1 cut(s) | 393 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 203, 267, 337 |
| Bse1I | ACTGG | 2 cut(s) | 272, 406 |
| BseCI | ATCGAT | 1 cut(s) | 393 |
| BseGI | GGATG | 2 cut(s) | 163, 310 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 203, 267, 337 |
| BseNI | ACTGG | 2 cut(s) | 272, 406 |
| BseRI | GAGGAG | 1 cut(s) | 84 |
| BshFI | GGCC | 2 cut(s) | 334, 406 |
| BshVI | ATCGAT | 1 cut(s) | 393 |
| BsiSI | CCGG | 2 cut(s) | 197, 331 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 203, 267, 337 |
| BsmAI | GTCTC | 1 cut(s) | 249 |
| BsnI | GGCC | 2 cut(s) | 334, 406 |
| BspACI | CCGC | 1 cut(s) | 301 |
| BspANI | GGCC | 2 cut(s) | 334, 406 |
| BspDI | ATCGAT | 1 cut(s) | 393 |
| BsrI | ACTGG | 2 cut(s) | 272, 406 |
| Bst4CI | ACNGT | 1 cut(s) | 191 |
| Bst6I | CTCTTC | 1 cut(s) | 303 |
| BstF5I | GGATG | 2 cut(s) | 163, 310 |
| BstH2I | RGCGCY | 1 cut(s) | 83 |
| BstHHI | GCGC | 1 cut(s) | 82 |
| BstMAI | GTCTC | 1 cut(s) | 249 |
| BstSFI | CTRYAG | 1 cut(s) | 123 |
| Bsu15I | ATCGAT | 1 cut(s) | 393 |
| BsuRI | GGCC | 2 cut(s) | 334, 406 |
| BsuTUI | ATCGAT | 1 cut(s) | 393 |
| BtsCI | GGATG | 2 cut(s) | 163, 310 |
| BtsIMutI | CAGTG | 1 cut(s) | 399 |
| CfoI | GCGC | 1 cut(s) | 82 |
| Cfr13I | GGNCC | 1 cut(s) | 404 |
| ClaI | ATCGAT | 1 cut(s) | 393 |
| Csp6I | GTAC | 1 cut(s) | 378 |
| CviAII | CATG | 1 cut(s) | 248 |
| CviJI | RGCY | 5 cut(s) | 128, 200, 334, 341, 406 |
| CviKI_1 | RGCY | 5 cut(s) | 128, 200, 334, 341, 406 |
| CviQI | GTAC | 1 cut(s) | 378 |
| Eam1104I | CTCTTC | 1 cut(s) | 303 |
| EarI | CTCTTC | 1 cut(s) | 303 |
| FaeI | CATG | 1 cut(s) | 251 |
| FaiI | YATR | 4 cut(s) | 13, 30, 88, 249 |
| FatI | CATG | 1 cut(s) | 247 |
| FauI | CCCGC | 1 cut(s) | 294 |
| FblI | GTMKAC | 3 cut(s) | 325, 437, 456 |
| FokI | GGATG | 2 cut(s) | 170, 317 |
| FspBI | CTAG | 1 cut(s) | 460 |
| GlaI | GCGC | 1 cut(s) | 81 |
| HaeII | RGCGCY | 1 cut(s) | 83 |
| HaeIII | GGCC | 2 cut(s) | 334, 406 |
| HapII | CCGG | 2 cut(s) | 197, 331 |
| HhaI | GCGC | 1 cut(s) | 82 |
| Hin1II | CATG | 1 cut(s) | 251 |
| Hin6I | GCGC | 1 cut(s) | 80 |
| HinP1I | GCGC | 1 cut(s) | 80 |
| HincII | GTYRAC | 1 cut(s) | 109 |
| HindII | GTYRAC | 1 cut(s) | 109 |
| HinfI | GANTC | 3 cut(s) | 119, 174, 327 |
| HpaII | CCGG | 2 cut(s) | 197, 331 |
| HphI | GGTGA | 2 cut(s) | 16, 218 |
| Hpy166II | GTNNAC | 5 cut(s) | 101, 109, 326, 438, 457 |
| Hpy188I | TCNGA | 1 cut(s) | 262 |
| Hpy8I | GTNNAC | 5 cut(s) | 101, 109, 326, 438, 457 |
| HpyAV | CCTTC | 3 cut(s) | 58, 89, 314 |
| HpyCH4III | ACNGT | 1 cut(s) | 191 |
| HpyCH4IV | ACGT | 1 cut(s) | 352 |
| HpySE526I | ACGT | 1 cut(s) | 352 |
| Hsp92II | CATG | 1 cut(s) | 251 |
| HspAI | GCGC | 1 cut(s) | 80 |
| LpnPI | CCDG | 9 cut(s) | 114, 137, 165, 210, 253, 344, 347, 348, 387 |
| MaeI | CTAG | 1 cut(s) | 460 |
| MaeII | ACGT | 1 cut(s) | 352 |
| MaeIII | GTNAC | 1 cut(s) | 175 |
| MboII | GAAGA | 1 cut(s) | 320 |
| MluCI | AATT | 1 cut(s) | 410 |
| MlyI | GAGTC | 2 cut(s) | 183, 321 |
| MnlI | CCTC | 6 cut(s) | 62, 65, 159, 220, 231, 268 |
| MseI | TTAA | 5 cut(s) | 170, 233, 278, 288, 384 |
| MspA1I | CMGCKG | 1 cut(s) | 128 |
| MspI | CCGG | 2 cut(s) | 197, 331 |
| NlaIII | CATG | 1 cut(s) | 251 |
| NmuCI | GTSAC | 1 cut(s) | 175 |
| PfeI | GAWTC | 1 cut(s) | 119 |
| PleI | GAGTC | 2 cut(s) | 182, 321 |
| PpsI | GAGTC | 2 cut(s) | 182, 321 |
| Psp1406I | AACGTT | 1 cut(s) | 352 |
| PspPI | GGNCC | 1 cut(s) | 404 |
| PvuII | CAGCTG | 1 cut(s) | 128 |
| RsaI | GTAC | 1 cut(s) | 379 |
| RsaNI | GTAC | 1 cut(s) | 378 |
| SaqAI | TTAA | 5 cut(s) | 170, 233, 278, 288, 384 |
| Sau96I | GGNCC | 1 cut(s) | 404 |
| SchI | GAGTC | 2 cut(s) | 183, 321 |
| SfcI | CTRYAG | 1 cut(s) | 123 |
| Sse9I | AATT | 1 cut(s) | 410 |
| SsiI | CCGC | 1 cut(s) | 301 |
| SspMI | CTAG | 1 cut(s) | 460 |
| TaaI | ACNGT | 1 cut(s) | 191 |
| TaiI | ACGT | 1 cut(s) | 355 |
| TaqI | TCGA | 1 cut(s) | 393 |
| TasI | AATT | 1 cut(s) | 410 |
| TatI | WGTACW | 1 cut(s) | 377 |
| TfiI | GAWTC | 1 cut(s) | 119 |
| Tru1I | TTAA | 5 cut(s) | 170, 233, 278, 288, 384 |
| Tru9I | TTAA | 5 cut(s) | 170, 233, 278, 288, 384 |
| TscAI | CASTG | 1 cut(s) | 406 |
| TseFI | GTSAC | 1 cut(s) | 175 |
| Tsp45I | GTSAC | 1 cut(s) | 175 |
| TspDTI | ATGAA | 3 cut(s) | 306, 321, 387 |
| TspRI | CASTG | 1 cut(s) | 406 |
| XapI | RAATTY | 1 cut(s) | 410 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 414 |
| XmiI | GTMKAC | 3 cut(s) | 325, 437, 456 |
| XspI | CTAG | 1 cut(s) | 460 |