ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 268 |
| AccB1I | GGYRCC | 1 cut(s) | 85 |
| AclWI | GGATC | 1 cut(s) | 329 |
| AfaI | GTAC | 2 cut(s) | 297, 344 |
| AhlI | ACTAGT | 1 cut(s) | 230 |
| AluBI | AGCT | 1 cut(s) | 212 |
| AluI | AGCT | 1 cut(s) | 212 |
| Alw26I | GTCTC | 1 cut(s) | 306 |
| AlwI | GGATC | 1 cut(s) | 329 |
| ApeKI | GCWGC | 2 cut(s) | 209, 212 |
| AspS9I | GGNCC | 1 cut(s) | 193 |
| AvaII | GGWCC | 1 cut(s) | 193 |
| BaeGI | GKGCMC | 1 cut(s) | 328 |
| BanI | GGYRCC | 1 cut(s) | 85 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 144, 176 |
| BbvI | GCAGC | 2 cut(s) | 199, 221 |
| BccI | CCATC | 1 cut(s) | 165 |
| BclI | TGATCA | 1 cut(s) | 46 |
| BcoDI | GTCTC | 1 cut(s) | 306 |
| BcuI | ACTAGT | 1 cut(s) | 230 |
| BfaI | CTAG | 3 cut(s) | 180, 231, 372 |
| BfuAI | ACCTGC | 1 cut(s) | 268 |
| BisI | GCNGC | 2 cut(s) | 210, 213 |
| BlsI | GCNGC | 2 cut(s) | 211, 214 |
| Bme18I | GGWCC | 1 cut(s) | 193 |
| BmgT120I | GGNCC | 1 cut(s) | 193 |
| BmiI | GGNNCC | 3 cut(s) | 87, 194, 195 |
| BmrI | ACTGGG | 1 cut(s) | 198 |
| BmuI | ACTGGG | 1 cut(s) | 198 |
| Bpu10I | CCTNAGC | 1 cut(s) | 272 |
| BsaAI | YACGTR | 1 cut(s) | 164 |
| BsaI | GGTCTC | 1 cut(s) | 306 |
| Bse1I | ACTGG | 2 cut(s) | 89, 193 |
| BseGI | GGATG | 4 cut(s) | 31, 139, 176, 316 |
| BseMII | CTCAG | 2 cut(s) | 286, 334 |
| BseNI | ACTGG | 2 cut(s) | 89, 193 |
| BseSI | GKGCMC | 1 cut(s) | 328 |
| BseXI | GCAGC | 2 cut(s) | 199, 221 |
| BshNI | GGYRCC | 1 cut(s) | 85 |
| BsiSI | CCGG | 1 cut(s) | 83 |
| BslFI | GGGAC | 1 cut(s) | 206 |
| BsmAI | GTCTC | 1 cut(s) | 306 |
| BsmFI | GGGAC | 1 cut(s) | 206 |
| Bso31I | GGTCTC | 1 cut(s) | 306 |
| Bsp1286I | GDGCHC | 1 cut(s) | 328 |
| Bsp143I | GATC | 2 cut(s) | 46, 334 |
| BspCNI | CTCAG | 2 cut(s) | 285, 333 |
| BspLI | GGNNCC | 3 cut(s) | 87, 194, 195 |
| BspMI | ACCTGC | 1 cut(s) | 268 |
| BspPI | GGATC | 1 cut(s) | 329 |
| BspT107I | GGYRCC | 1 cut(s) | 85 |
| BspTNI | GGTCTC | 1 cut(s) | 306 |
| BsrI | ACTGG | 2 cut(s) | 89, 193 |
| BssMI | GATC | 2 cut(s) | 46, 334 |
| Bst4CI | ACNGT | 3 cut(s) | 53, 109, 300 |
| Bst6I | CTCTTC | 2 cut(s) | 13, 95 |
| BstBAI | YACGTR | 1 cut(s) | 164 |
| BstDEI | CTNAG | 2 cut(s) | 272, 320 |
| BstF5I | GGATG | 4 cut(s) | 31, 139, 176, 316 |
| BstKTI | GATC | 2 cut(s) | 49, 337 |
| BstMAI | GTCTC | 1 cut(s) | 306 |
| BstMBI | GATC | 2 cut(s) | 46, 334 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 245 |
| BstSLI | GKGCMC | 1 cut(s) | 328 |
| BstV1I | GCAGC | 2 cut(s) | 199, 221 |
| BtsCI | GGATG | 4 cut(s) | 31, 139, 176, 316 |
| BtsIMutI | CAGTG | 2 cut(s) | 114, 328 |
| BveI | ACCTGC | 1 cut(s) | 268 |
| Cfr13I | GGNCC | 1 cut(s) | 193 |
| Csp6I | GTAC | 2 cut(s) | 296, 343 |
| CviAII | CATG | 2 cut(s) | 249, 268 |
| CviJI | RGCY | 4 cut(s) | 134, 212, 239, 259 |
| CviKI_1 | RGCY | 4 cut(s) | 134, 212, 239, 259 |
| CviQI | GTAC | 2 cut(s) | 296, 343 |
| DdeI | CTNAG | 2 cut(s) | 272, 320 |
| DpnI | GATC | 2 cut(s) | 48, 336 |
| DpnII | GATC | 2 cut(s) | 46, 334 |
| Eam1104I | CTCTTC | 2 cut(s) | 13, 95 |
| EarI | CTCTTC | 2 cut(s) | 13, 95 |
| Eco31I | GGTCTC | 1 cut(s) | 306 |
| Eco47I | GGWCC | 1 cut(s) | 193 |
| EcoO109I | RGGNCCY | 1 cut(s) | 193 |
| FaeI | CATG | 2 cut(s) | 252, 271 |
| FaiI | YATR | 7 cut(s) | 73, 161, 250, 269, 331, 333, 350 |
| FaqI | GGGAC | 1 cut(s) | 206 |
| FatI | CATG | 2 cut(s) | 248, 267 |
| FauNDI | CATATG | 1 cut(s) | 331 |
| FbaI | TGATCA | 1 cut(s) | 46 |
| Fnu4HI | GCNGC | 2 cut(s) | 210, 213 |
| FokI | GGATG | 4 cut(s) | 18, 126, 183, 323 |
| Fsp4HI | GCNGC | 2 cut(s) | 210, 213 |
| FspBI | CTAG | 3 cut(s) | 180, 231, 372 |
| GluI | GCNGC | 2 cut(s) | 210, 213 |
| HapII | CCGG | 1 cut(s) | 83 |
| Hin1II | CATG | 2 cut(s) | 252, 271 |
| HpaII | CCGG | 1 cut(s) | 83 |
| Hpy188I | TCNGA | 3 cut(s) | 46, 116, 144 |
| Hpy188III | TCNNGA | 1 cut(s) | 303 |
| HpyAV | CCTTC | 3 cut(s) | 38, 146, 283 |
| HpyCH4III | ACNGT | 3 cut(s) | 53, 109, 300 |
| HpyCH4IV | ACGT | 1 cut(s) | 163 |
| HpyCH4V | TGCA | 1 cut(s) | 215 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 245 |
| HpyF3I | CTNAG | 2 cut(s) | 272, 320 |
| HpySE526I | ACGT | 1 cut(s) | 163 |
| Hsp92II | CATG | 2 cut(s) | 252, 271 |
| KflI | GGGWCCC | 1 cut(s) | 193 |
| Ksp22I | TGATCA | 1 cut(s) | 46 |
| Kzo9I | GATC | 2 cut(s) | 46, 334 |
| LpnPI | CCDG | 6 cut(s) | 96, 102, 174, 259, 263, 351 |
| Lsp1109I | GCAGC | 2 cut(s) | 199, 221 |
| MaeI | CTAG | 3 cut(s) | 180, 231, 372 |
| MaeII | ACGT | 1 cut(s) | 163 |
| MaeIII | GTNAC | 1 cut(s) | 184 |
| MalI | GATC | 2 cut(s) | 48, 336 |
| MboI | GATC | 2 cut(s) | 46, 334 |
| MboII | GAAGA | 1 cut(s) | 112 |
| MhlI | GDGCHC | 1 cut(s) | 328 |
| MluCI | AATT | 1 cut(s) | 125 |
| MnlI | CCTC | 5 cut(s) | 22, 90, 96, 161, 374 |
| MseI | TTAA | 2 cut(s) | 222, 379 |
| MspA1I | CMGCKG | 1 cut(s) | 212 |
| MspI | CCGG | 1 cut(s) | 83 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 245 |
| NdeI | CATATG | 1 cut(s) | 331 |
| NdeII | GATC | 2 cut(s) | 46, 334 |
| NlaIII | CATG | 2 cut(s) | 252, 271 |
| NlaIV | GGNNCC | 3 cut(s) | 87, 194, 195 |
| PkrI | GCNGC | 2 cut(s) | 211, 214 |
| Ppu21I | YACGTR | 1 cut(s) | 164 |
| PpuMI | RGGWCCY | 1 cut(s) | 193 |
| Psp5II | RGGWCCY | 1 cut(s) | 193 |
| PspN4I | GGNNCC | 3 cut(s) | 87, 194, 195 |
| PspPI | GGNCC | 1 cut(s) | 193 |
| PspPPI | RGGWCCY | 1 cut(s) | 193 |
| PvuII | CAGCTG | 1 cut(s) | 212 |
| RsaI | GTAC | 2 cut(s) | 297, 344 |
| RsaNI | GTAC | 2 cut(s) | 296, 343 |
| SaqAI | TTAA | 2 cut(s) | 222, 379 |
| SatI | GCNGC | 2 cut(s) | 210, 213 |
| Sau3AI | GATC | 2 cut(s) | 46, 334 |
| Sau96I | GGNCC | 1 cut(s) | 193 |
| SduI | GDGCHC | 1 cut(s) | 328 |
| SetI | ASST | 8 cut(s) | 30, 157, 166, 214, 282, 294, 366, 377 |
| SinI | GGWCC | 1 cut(s) | 193 |
| SpeI | ACTAGT | 1 cut(s) | 230 |
| Sse9I | AATT | 1 cut(s) | 125 |
| SspMI | CTAG | 3 cut(s) | 180, 231, 372 |
| TaaI | ACNGT | 3 cut(s) | 53, 109, 300 |
| TaiI | ACGT | 1 cut(s) | 166 |
| TaqI | TCGA | 1 cut(s) | 304 |
| TasI | AATT | 1 cut(s) | 125 |
| Tru1I | TTAA | 2 cut(s) | 222, 379 |
| Tru9I | TTAA | 2 cut(s) | 222, 379 |
| TscAI | CASTG | 2 cut(s) | 114, 328 |
| TseI | GCWGC | 2 cut(s) | 209, 212 |
| TspDTI | ATGAA | 4 cut(s) | 20, 256, 302, 327 |
| TspGWI | ACGGA | 1 cut(s) | 45 |
| TspRI | CASTG | 2 cut(s) | 114, 328 |
| VpaK11BI | GGWCC | 1 cut(s) | 193 |
| XspI | CTAG | 3 cut(s) | 180, 231, 372 |