Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 165 |
| AciI | CCGC | 2 cut(s) | 224, 250 |
| AcsI | RAATTY | 1 cut(s) | 118 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 130, 150, 323 |
| AgsI | TTSAA | 1 cut(s) | 257 |
| AluBI | AGCT | 3 cut(s) | 20, 60, 136 |
| AluI | AGCT | 3 cut(s) | 20, 60, 136 |
| Ama87I | CYCGRG | 1 cut(s) | 150 |
| AoxI | GGCC | 1 cut(s) | 218 |
| ApeKI | GCWGC | 1 cut(s) | 226 |
| ApoI | RAATTY | 1 cut(s) | 118 |
| AseI | ATTAAT | 1 cut(s) | 288 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 8 |
| AspS9I | GGNCC | 2 cut(s) | 103, 177 |
| AsuC2I | CCSGG | 2 cut(s) | 151, 152 |
| AsuHPI | GGTGA | 2 cut(s) | 151, 338 |
| AvaI | CYCGRG | 1 cut(s) | 150 |
| AvaII | GGWCC | 2 cut(s) | 103, 177 |
| BbvI | GCAGC | 1 cut(s) | 213 |
| BcnI | CCSGG | 2 cut(s) | 151, 152 |
| BfaI | CTAG | 1 cut(s) | 240 |
| BfuAI | ACCTGC | 1 cut(s) | 165 |
| BisI | GCNGC | 1 cut(s) | 227 |
| BlsI | GCNGC | 1 cut(s) | 228 |
| Bme1390I | CCNGG | 2 cut(s) | 151, 152 |
| Bme18I | GGWCC | 2 cut(s) | 103, 177 |
| BmeT110I | CYCGRG | 1 cut(s) | 150 |
| BmgT120I | GGNCC | 2 cut(s) | 103, 177 |
| BmrFI | CCNGG | 2 cut(s) | 151, 152 |
| BoxI | GACNNNNGTC | 1 cut(s) | 186 |
| BpuMI | CCSGG | 2 cut(s) | 151, 152 |
| BsaJI | CCNNGG | 1 cut(s) | 150 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 130, 150, 323 |
| Bse1I | ACTGG | 1 cut(s) | 328 |
| BseDI | CCNNGG | 1 cut(s) | 150 |
| BseGI | GGATG | 1 cut(s) | 315 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 130, 150, 323 |
| BseMII | CTCAG | 1 cut(s) | 161 |
| BseNI | ACTGG | 1 cut(s) | 328 |
| BseXI | GCAGC | 1 cut(s) | 213 |
| BsgI | GTGCAG | 1 cut(s) | 212 |
| BshFI | GGCC | 1 cut(s) | 220 |
| BsiHKCI | CYCGRG | 1 cut(s) | 150 |
| BsiSI | CCGG | 1 cut(s) | 151 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 130, 150, 323 |
| BsnI | GGCC | 1 cut(s) | 220 |
| BsoBI | CYCGRG | 1 cut(s) | 150 |
| BspACI | CCGC | 2 cut(s) | 224, 250 |
| BspANI | GGCC | 1 cut(s) | 220 |
| BspCNI | CTCAG | 1 cut(s) | 162 |
| BspMI | ACCTGC | 1 cut(s) | 165 |
| BsrI | ACTGG | 1 cut(s) | 328 |
| BssECI | CCNNGG | 1 cut(s) | 150 |
| Bst4CI | ACNGT | 1 cut(s) | 188 |
| Bst6I | CTCTTC | 1 cut(s) | 198 |
| BstDEI | CTNAG | 1 cut(s) | 170 |
| BstF5I | GGATG | 1 cut(s) | 315 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 226 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 186 |
| BstSCI | CCNGG | 2 cut(s) | 149, 150 |
| BstV1I | GCAGC | 1 cut(s) | 213 |
| BsuRI | GGCC | 1 cut(s) | 220 |
| BtsCI | GGATG | 1 cut(s) | 315 |
| BtsIMutI | CAGTG | 1 cut(s) | 184 |
| BveI | ACCTGC | 1 cut(s) | 165 |
| Cfr13I | GGNCC | 2 cut(s) | 103, 177 |
| Cfr9I | CCCGGG | 1 cut(s) | 150 |
| CviAII | CATG | 1 cut(s) | 107 |
| CviJI | RGCY | 4 cut(s) | 20, 60, 136, 220 |
| CviKI_1 | RGCY | 4 cut(s) | 20, 60, 136, 220 |
| DdeI | CTNAG | 1 cut(s) | 170 |
| Eam1104I | CTCTTC | 1 cut(s) | 198 |
| EarI | CTCTTC | 1 cut(s) | 198 |
| Eco147I | AGGCCT | 1 cut(s) | 220 |
| Eco47I | GGWCC | 2 cut(s) | 103, 177 |
| Eco88I | CYCGRG | 1 cut(s) | 150 |
| FaeI | CATG | 1 cut(s) | 110 |
| FaiI | YATR | 6 cut(s) | 47, 69, 108, 200, 335, 340 |
| FatI | CATG | 1 cut(s) | 106 |
| Fnu4HI | GCNGC | 1 cut(s) | 227 |
| FokI | GGATG | 1 cut(s) | 322 |
| Fsp4HI | GCNGC | 1 cut(s) | 227 |
| FspBI | CTAG | 1 cut(s) | 240 |
| GluI | GCNGC | 1 cut(s) | 227 |
| HaeIII | GGCC | 1 cut(s) | 220 |
| HapII | CCGG | 1 cut(s) | 151 |
| Hin1II | CATG | 1 cut(s) | 110 |
| HindIII | AAGCTT | 1 cut(s) | 18 |
| HinfI | GANTC | 1 cut(s) | 9 |
| HpaII | CCGG | 1 cut(s) | 151 |
| HphI | GGTGA | 2 cut(s) | 151, 338 |
| Hpy166II | GTNNAC | 2 cut(s) | 87, 329 |
| Hpy188I | TCNGA | 5 cut(s) | 117, 171, 181, 280, 300 |
| Hpy188III | TCNNGA | 1 cut(s) | 212 |
| Hpy8I | GTNNAC | 2 cut(s) | 87, 329 |
| HpyAV | CCTTC | 1 cut(s) | 295 |
| HpyCH4III | ACNGT | 1 cut(s) | 188 |
| HpyCH4IV | ACGT | 1 cut(s) | 244 |
| HpyCH4V | TGCA | 2 cut(s) | 229, 285 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 226 |
| HpyF3I | CTNAG | 1 cut(s) | 170 |
| HpySE526I | ACGT | 1 cut(s) | 244 |
| Hsp92II | CATG | 1 cut(s) | 110 |
| LmnI | GCTCC | 1 cut(s) | 133 |
| LpnPI | CCDG | 4 cut(s) | 160, 164, 225, 309 |
| Lsp1109I | GCAGC | 1 cut(s) | 213 |
| MaeI | CTAG | 1 cut(s) | 240 |
| MaeII | ACGT | 1 cut(s) | 244 |
| MaeIII | GTNAC | 1 cut(s) | 267 |
| MboII | GAAGA | 2 cut(s) | 185, 269 |
| MluCI | AATT | 1 cut(s) | 118 |
| MmeI | TCCRAC | 2 cut(s) | 204, 287 |
| MnlI | CCTC | 7 cut(s) | 123, 173, 177, 196, 201, 210, 231 |
| MroXI | GAANNNNTTC | 1 cut(s) | 8 |
| MseI | TTAA | 3 cut(s) | 38, 207, 288 |
| MspA1I | CMGCKG | 1 cut(s) | 226 |
| MspI | CCGG | 1 cut(s) | 151 |
| MspR9I | CCNGG | 2 cut(s) | 151, 152 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 226 |
| NciI | CCSGG | 2 cut(s) | 151, 152 |
| NlaIII | CATG | 1 cut(s) | 110 |
| PceI | AGGCCT | 1 cut(s) | 220 |
| PdmI | GAANNNNTTC | 1 cut(s) | 8 |
| PfeI | GAWTC | 1 cut(s) | 9 |
| PkrI | GCNGC | 1 cut(s) | 228 |
| PshAI | GACNNNNGTC | 1 cut(s) | 186 |
| PshBI | ATTAAT | 1 cut(s) | 288 |
| PspPI | GGNCC | 2 cut(s) | 103, 177 |
| SaqAI | TTAA | 3 cut(s) | 38, 207, 288 |
| SatI | GCNGC | 1 cut(s) | 227 |
| Sau96I | GGNCC | 2 cut(s) | 103, 177 |
| ScrFI | CCNGG | 2 cut(s) | 151, 152 |
| SetI | ASST | 7 cut(s) | 22, 62, 138, 179, 207, 247, 334 |
| SinI | GGWCC | 2 cut(s) | 103, 177 |
| SmaI | CCCGGG | 1 cut(s) | 152 |
| Sse9I | AATT | 1 cut(s) | 118 |
| SseBI | AGGCCT | 1 cut(s) | 220 |
| SsiI | CCGC | 2 cut(s) | 224, 250 |
| SspMI | CTAG | 1 cut(s) | 240 |
| StuI | AGGCCT | 1 cut(s) | 220 |
| StyD4I | CCNGG | 2 cut(s) | 149, 150 |
| TaaI | ACNGT | 1 cut(s) | 188 |
| TaiI | ACGT | 1 cut(s) | 247 |
| TasI | AATT | 1 cut(s) | 118 |
| TfiI | GAWTC | 1 cut(s) | 9 |
| Tru1I | TTAA | 3 cut(s) | 38, 207, 288 |
| Tru9I | TTAA | 3 cut(s) | 38, 207, 288 |
| TscAI | CASTG | 1 cut(s) | 191 |
| TseI | GCWGC | 1 cut(s) | 226 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspMI | CCCGGG | 1 cut(s) | 150 |
| TspRI | CASTG | 1 cut(s) | 191 |
| VpaK11BI | GGWCC | 2 cut(s) | 103, 177 |
| VspI | ATTAAT | 1 cut(s) | 288 |
| XapI | RAATTY | 1 cut(s) | 118 |
| XmaI | CCCGGG | 1 cut(s) | 150 |
| XmnI | GAANNNNTTC | 1 cut(s) | 8 |
| XspI | CTAG | 1 cut(s) | 240 |