Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 873 |
| AccB1I | GGYRCC | 1 cut(s) | 873 |
| AccI | GTMKAC | 1 cut(s) | 256 |
| AclI | AACGTT | 1 cut(s) | 804 |
| AclWI | GGATC | 1 cut(s) | 629 |
| AfaI | GTAC | 5 cut(s) | 41, 251, 303, 570, 875 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 617 |
| AflIII | ACRYGT | 1 cut(s) | 241 |
| AgsI | TTSAA | 2 cut(s) | 47, 845 |
| AjnI | CCWGG | 1 cut(s) | 627 |
| AluBI | AGCT | 5 cut(s) | 82, 148, 181, 335, 833 |
| AluI | AGCT | 5 cut(s) | 82, 148, 181, 335, 833 |
| AlwI | GGATC | 1 cut(s) | 629 |
| Ama87I | CYCGRG | 1 cut(s) | 615 |
| AoxI | GGCC | 1 cut(s) | 351 |
| ApeKI | GCWGC | 1 cut(s) | 783 |
| Asp718I | GGTACC | 1 cut(s) | 873 |
| AspLEI | GCGC | 1 cut(s) | 414 |
| AsuHPI | GGTGA | 1 cut(s) | 113 |
| AsuII | TTCGAA | 1 cut(s) | 724 |
| AvaI | CYCGRG | 1 cut(s) | 615 |
| BanI | GGYRCC | 1 cut(s) | 873 |
| BbsI | GAAGAC | 1 cut(s) | 678 |
| BbvI | GCAGC | 1 cut(s) | 795 |
| BccI | CCATC | 1 cut(s) | 845 |
| BciT130I | CCWGG | 1 cut(s) | 629 |
| BciVI | GTATCC | 1 cut(s) | 178 |
| BfaI | CTAG | 3 cut(s) | 297, 756, 830 |
| BfmI | CTRYAG | 1 cut(s) | 471 |
| BfuI | GTATCC | 1 cut(s) | 178 |
| BisI | GCNGC | 1 cut(s) | 784 |
| BlsI | GCNGC | 1 cut(s) | 785 |
| BmcAI | AGTACT | 1 cut(s) | 570 |
| Bme1390I | CCNGG | 1 cut(s) | 629 |
| BmeT110I | CYCGRG | 1 cut(s) | 615 |
| BmiI | GGNNCC | 1 cut(s) | 875 |
| BmrFI | CCNGG | 1 cut(s) | 629 |
| BmsI | GCATC | 2 cut(s) | 27, 761 |
| BpiI | GAAGAC | 1 cut(s) | 678 |
| BpmI | CTGGAG | 1 cut(s) | 88 |
| Bpu14I | TTCGAA | 1 cut(s) | 724 |
| BsaJI | CCNNGG | 2 cut(s) | 381, 877 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 617 |
| BseBI | CCWGG | 1 cut(s) | 629 |
| BseDI | CCNNGG | 2 cut(s) | 381, 877 |
| BseGI | GGATG | 1 cut(s) | 637 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 617 |
| BseMII | CTCAG | 2 cut(s) | 345, 588 |
| BseRI | GAGGAG | 1 cut(s) | 633 |
| BseXI | GCAGC | 1 cut(s) | 795 |
| BseYI | CCCAGC | 1 cut(s) | 885 |
| BshFI | GGCC | 1 cut(s) | 353 |
| BshNI | GGYRCC | 1 cut(s) | 873 |
| BsiHKCI | CYCGRG | 1 cut(s) | 615 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 617 |
| BsnI | GGCC | 1 cut(s) | 353 |
| BsoBI | CYCGRG | 1 cut(s) | 615 |
| Bsp119I | TTCGAA | 1 cut(s) | 724 |
| Bsp143I | GATC | 4 cut(s) | 293, 322, 634, 729 |
| BspANI | GGCC | 1 cut(s) | 353 |
| BspCNI | CTCAG | 2 cut(s) | 344, 589 |
| BspLI | GGNNCC | 1 cut(s) | 875 |
| BspMAI | CTGCAG | 1 cut(s) | 475 |
| BspPI | GGATC | 1 cut(s) | 629 |
| BspQI | GCTCTTC | 2 cut(s) | 219, 773 |
| BspT104I | TTCGAA | 1 cut(s) | 724 |
| BspT107I | GGYRCC | 1 cut(s) | 873 |
| BssECI | CCNNGG | 2 cut(s) | 381, 877 |
| BssMI | GATC | 4 cut(s) | 293, 322, 634, 729 |
| BssNAI | GTATAC | 1 cut(s) | 257 |
| BssT1I | CCWWGG | 1 cut(s) | 381 |
| Bst1107I | GTATAC | 1 cut(s) | 257 |
| Bst2UI | CCWGG | 1 cut(s) | 629 |
| Bst4CI | ACNGT | 2 cut(s) | 254, 720 |
| Bst6I | CTCTTC | 3 cut(s) | 219, 227, 773 |
| BstBI | TTCGAA | 1 cut(s) | 724 |
| BstC8I | GCNNGC | 1 cut(s) | 564 |
| BstDEI | CTNAG | 3 cut(s) | 331, 597, 733 |
| BstF5I | GGATG | 1 cut(s) | 637 |
| BstHHI | GCGC | 1 cut(s) | 414 |
| BstKTI | GATC | 4 cut(s) | 296, 325, 637, 732 |
| BstMBI | GATC | 4 cut(s) | 293, 322, 634, 729 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 72, 830 |
| BstNI | CCWGG | 1 cut(s) | 629 |
| BstNSI | RCATGY | 1 cut(s) | 245 |
| BstSCI | CCNGG | 1 cut(s) | 627 |
| BstSFI | CTRYAG | 1 cut(s) | 471 |
| BstV1I | GCAGC | 1 cut(s) | 795 |
| BstV2I | GAAGAC | 1 cut(s) | 678 |
| BstZ17I | GTATAC | 1 cut(s) | 257 |
| BsuI | GTATCC | 1 cut(s) | 178 |
| BsuRI | GGCC | 1 cut(s) | 353 |
| BtsCI | GGATG | 1 cut(s) | 637 |
| BtsIMutI | CAGTG | 1 cut(s) | 857 |
| Cac8I | GCNNGC | 1 cut(s) | 564 |
| CfoI | GCGC | 1 cut(s) | 414 |
| CseI | GACGC | 1 cut(s) | 185 |
| Csp6I | GTAC | 5 cut(s) | 40, 250, 302, 569, 874 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 483, 518 |
| CviAII | CATG | 5 cut(s) | 193, 242, 522, 866, 897 |
| CviQI | GTAC | 5 cut(s) | 40, 250, 302, 569, 874 |
| DdeI | CTNAG | 3 cut(s) | 331, 597, 733 |
| DpnI | GATC | 4 cut(s) | 295, 324, 636, 731 |
| DpnII | GATC | 4 cut(s) | 293, 322, 634, 729 |
| DraI | TTTAAA | 1 cut(s) | 117 |
| Eam1104I | CTCTTC | 3 cut(s) | 219, 227, 773 |
| EarI | CTCTTC | 3 cut(s) | 219, 227, 773 |
| Eco130I | CCWWGG | 1 cut(s) | 381 |
| Eco147I | AGGCCT | 1 cut(s) | 353 |
| Eco88I | CYCGRG | 1 cut(s) | 615 |
| EcoRII | CCWGG | 1 cut(s) | 627 |
| EcoT14I | CCWWGG | 1 cut(s) | 381 |
| ErhI | CCWWGG | 1 cut(s) | 381 |
| FaeI | CATG | 5 cut(s) | 196, 245, 525, 869, 900 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 755, 787 |
| FatI | CATG | 5 cut(s) | 192, 241, 521, 865, 896 |
| FauNDI | CATATG | 1 cut(s) | 133 |
| FblI | GTMKAC | 1 cut(s) | 256 |
| Fnu4HI | GCNGC | 1 cut(s) | 784 |
| FokI | GGATG | 1 cut(s) | 644 |
| Fsp4HI | GCNGC | 1 cut(s) | 784 |
| FspBI | CTAG | 3 cut(s) | 297, 756, 830 |
| GlaI | GCGC | 1 cut(s) | 413 |
| GluI | GCNGC | 1 cut(s) | 784 |
| GsaI | CCCAGC | 1 cut(s) | 889 |
| GsuI | CTGGAG | 1 cut(s) | 88 |
| HaeIII | GGCC | 1 cut(s) | 353 |
| HgaI | GACGC | 1 cut(s) | 185 |
| HhaI | GCGC | 1 cut(s) | 414 |
| Hin1II | CATG | 5 cut(s) | 196, 245, 525, 869, 900 |
| Hin6I | GCGC | 1 cut(s) | 412 |
| HinP1I | GCGC | 1 cut(s) | 412 |
| HincII | GTYRAC | 2 cut(s) | 200, 716 |
| HindII | GTYRAC | 2 cut(s) | 200, 716 |
| HinfI | GANTC | 2 cut(s) | 52, 92 |
| HphI | GGTGA | 1 cut(s) | 113 |
| Hpy166II | GTNNAC | 5 cut(s) | 200, 239, 257, 716, 769 |
| Hpy188I | TCNGA | 3 cut(s) | 558, 777, 881 |
| Hpy188III | TCNNGA | 1 cut(s) | 756 |
| Hpy8I | GTNNAC | 5 cut(s) | 200, 239, 257, 716, 769 |
| HpyAV | CCTTC | 1 cut(s) | 311 |
| HpyCH4III | ACNGT | 2 cut(s) | 254, 720 |
| HpyCH4IV | ACGT | 1 cut(s) | 804 |
| HpyCH4V | TGCA | 3 cut(s) | 473, 494, 809 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 72, 830 |
| HpyF3I | CTNAG | 3 cut(s) | 331, 597, 733 |
| HpySE526I | ACGT | 1 cut(s) | 804 |
| Hsp92II | CATG | 5 cut(s) | 196, 245, 525, 869, 900 |
| HspAI | GCGC | 1 cut(s) | 412 |
| KpnI | GGTACC | 1 cut(s) | 877 |
| Kzo9I | GATC | 4 cut(s) | 293, 322, 634, 729 |
| LguI | GCTCTTC | 2 cut(s) | 219, 773 |
| LpnPI | CCDG | 9 cut(s) | 41, 52, 68, 158, 167, 438, 614, 641, 871 |
| Lsp1109I | GCAGC | 1 cut(s) | 795 |
| LweI | GCATC | 2 cut(s) | 27, 761 |
| MaeI | CTAG | 3 cut(s) | 297, 756, 830 |
| MaeII | ACGT | 1 cut(s) | 804 |
| MaeIII | GTNAC | 3 cut(s) | 89, 326, 529 |
| MalI | GATC | 4 cut(s) | 295, 324, 636, 731 |
| MboI | GATC | 4 cut(s) | 293, 322, 634, 729 |
| MboII | GAAGA | 7 cut(s) | 236, 244, 284, 613, 683, 790, 824 |
| MfeI | CAATTG | 1 cut(s) | 495 |
| MluCI | AATT | 2 cut(s) | 406, 495 |
| MlyI | GAGTC | 2 cut(s) | 61, 86 |
| MseI | TTAA | 4 cut(s) | 116, 162, 389, 858 |
| MspR9I | CCNGG | 1 cut(s) | 629 |
| MunI | CAATTG | 1 cut(s) | 495 |
| MvaI | CCWGG | 1 cut(s) | 629 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 72, 830 |
| NdeI | CATATG | 1 cut(s) | 133 |
| NdeII | GATC | 4 cut(s) | 293, 322, 634, 729 |
| NlaIII | CATG | 5 cut(s) | 196, 245, 525, 869, 900 |
| NlaIV | GGNNCC | 1 cut(s) | 875 |
| NmuCI | GTSAC | 1 cut(s) | 89 |
| NspI | RCATGY | 1 cut(s) | 245 |
| NspV | TTCGAA | 1 cut(s) | 724 |
| PaeR7I | CTCGAG | 1 cut(s) | 615 |
| PceI | AGGCCT | 1 cut(s) | 353 |
| PciI | ACATGT | 1 cut(s) | 241 |
| PciSI | GCTCTTC | 2 cut(s) | 219, 773 |
| PkrI | GCNGC | 1 cut(s) | 785 |
| PleI | GAGTC | 2 cut(s) | 60, 86 |
| PpsI | GAGTC | 2 cut(s) | 60, 86 |
| PscI | ACATGT | 1 cut(s) | 241 |
| Psp1406I | AACGTT | 1 cut(s) | 804 |
| Psp6I | CCWGG | 1 cut(s) | 627 |
| PspFI | CCCAGC | 1 cut(s) | 885 |
| PspGI | CCWGG | 1 cut(s) | 627 |
| PspN4I | GGNNCC | 1 cut(s) | 875 |
| PspXI | VCTCGAGB | 1 cut(s) | 615 |
| PstI | CTGCAG | 1 cut(s) | 475 |
| RsaI | GTAC | 5 cut(s) | 41, 251, 303, 570, 875 |
| RsaNI | GTAC | 5 cut(s) | 40, 250, 302, 569, 874 |
| SapI | GCTCTTC | 2 cut(s) | 219, 773 |
| SaqAI | TTAA | 4 cut(s) | 116, 162, 389, 858 |
| SatI | GCNGC | 1 cut(s) | 784 |
| Sau3AI | GATC | 4 cut(s) | 293, 322, 634, 729 |
| ScaI | AGTACT | 1 cut(s) | 570 |
| SchI | GAGTC | 2 cut(s) | 61, 86 |
| ScrFI | CCNGG | 1 cut(s) | 629 |
| SfaNI | GCATC | 2 cut(s) | 27, 761 |
| SfcI | CTRYAG | 1 cut(s) | 471 |
| Sfr274I | CTCGAG | 1 cut(s) | 615 |
| SfuI | TTCGAA | 1 cut(s) | 724 |
| SlaI | CTCGAG | 1 cut(s) | 615 |
| SmlI | CTYRAG | 1 cut(s) | 615 |
| SmoI | CTYRAG | 1 cut(s) | 615 |
| Sse9I | AATT | 2 cut(s) | 406, 495 |
| SseBI | AGGCCT | 1 cut(s) | 353 |
| SspI | AATATT | 1 cut(s) | 281 |
| SspMI | CTAG | 3 cut(s) | 297, 756, 830 |
| StuI | AGGCCT | 1 cut(s) | 353 |
| StyD4I | CCNGG | 1 cut(s) | 627 |
| StyI | CCWWGG | 1 cut(s) | 381 |
| TaaI | ACNGT | 2 cut(s) | 254, 720 |
| TaiI | ACGT | 1 cut(s) | 807 |
| TaqI | TCGA | 4 cut(s) | 60, 526, 616, 724 |
| TasI | AATT | 2 cut(s) | 406, 495 |
| TatI | WGTACW | 1 cut(s) | 568 |
| Tru1I | TTAA | 4 cut(s) | 116, 162, 389, 858 |
| Tru9I | TTAA | 4 cut(s) | 116, 162, 389, 858 |
| TscAI | CASTG | 1 cut(s) | 857 |
| TseFI | GTSAC | 1 cut(s) | 89 |
| TseI | GCWGC | 1 cut(s) | 783 |
| Tsp45I | GTSAC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 6 cut(s) | 17, 20, 237, 332, 411, 557 |
| TspRI | CASTG | 1 cut(s) | 857 |
| XbaI | TCTAGA | 1 cut(s) | 755 |
| XceI | RCATGY | 1 cut(s) | 245 |
| XhoI | CTCGAG | 1 cut(s) | 615 |
| XmiI | GTMKAC | 1 cut(s) | 256 |
| XspI | CTAG | 3 cut(s) | 297, 756, 830 |
| ZrmI | AGTACT | 1 cut(s) | 570 |