ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 81 |
| Acc36I | ACCTGC | 1 cut(s) | 159 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 31 |
| AciI | CCGC | 1 cut(s) | 252 |
| AcsI | RAATTY | 1 cut(s) | 64 |
| AfaI | GTAC | 2 cut(s) | 160, 299 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 31 |
| AflII | CTTAAG | 1 cut(s) | 494 |
| AgsI | TTSAA | 1 cut(s) | 415 |
| Alw21I | GWGCWC | 1 cut(s) | 49 |
| Alw26I | GTCTC | 1 cut(s) | 451 |
| AoxI | GGCC | 2 cut(s) | 54, 505 |
| ApaI | GGGCCC | 1 cut(s) | 58 |
| ApoI | RAATTY | 1 cut(s) | 64 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 291 |
| AspS9I | GGNCC | 2 cut(s) | 54, 55 |
| AsuC2I | CCSGG | 1 cut(s) | 53 |
| AsuHPI | GGTGA | 2 cut(s) | 133, 419 |
| BaeGI | GKGCMC | 1 cut(s) | 58 |
| BanII | GRGCYC | 1 cut(s) | 58 |
| BbsI | GAAGAC | 2 cut(s) | 224, 273 |
| Bbv12I | GWGCWC | 1 cut(s) | 49 |
| BccI | CCATC | 2 cut(s) | 260, 334 |
| BcnI | CCSGG | 1 cut(s) | 53 |
| BcoDI | GTCTC | 1 cut(s) | 451 |
| BfaI | CTAG | 2 cut(s) | 425, 535 |
| BfmI | CTRYAG | 1 cut(s) | 387 |
| BfrI | CTTAAG | 1 cut(s) | 494 |
| BfuAI | ACCTGC | 1 cut(s) | 159 |
| Bme1390I | CCNGG | 1 cut(s) | 53 |
| BmgT120I | GGNCC | 2 cut(s) | 54, 55 |
| BmiI | GGNNCC | 1 cut(s) | 56 |
| BmrFI | CCNGG | 1 cut(s) | 53 |
| BmsI | GCATC | 1 cut(s) | 172 |
| BpiI | GAAGAC | 2 cut(s) | 224, 273 |
| BpuEI | CTTGAG | 1 cut(s) | 496 |
| BpuMI | CCSGG | 1 cut(s) | 53 |
| BsaBI | GATNNNNATC | 1 cut(s) | 525 |
| BsaI | GGTCTC | 1 cut(s) | 451 |
| BsaJI | CCNNGG | 2 cut(s) | 25, 58 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 31 |
| Bse1I | ACTGG | 1 cut(s) | 230 |
| Bse8I | GATNNNNATC | 1 cut(s) | 525 |
| BseDI | CCNNGG | 2 cut(s) | 25, 58 |
| BseGI | GGATG | 4 cut(s) | 142, 187, 322, 452 |
| BseJI | GATNNNNATC | 1 cut(s) | 525 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 31 |
| BseMII | CTCAG | 2 cut(s) | 32, 62 |
| BseNI | ACTGG | 1 cut(s) | 230 |
| BseSI | GKGCMC | 1 cut(s) | 58 |
| BsgI | GTGCAG | 2 cut(s) | 137, 507 |
| BshFI | GGCC | 2 cut(s) | 56, 507 |
| BsiHKAI | GWGCWC | 1 cut(s) | 49 |
| BsiSI | CCGG | 1 cut(s) | 52 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 31 |
| BsmAI | GTCTC | 1 cut(s) | 451 |
| BsnI | GGCC | 2 cut(s) | 56, 507 |
| Bso31I | GGTCTC | 1 cut(s) | 451 |
| Bsp120I | GGGCCC | 1 cut(s) | 54 |
| Bsp1286I | GDGCHC | 2 cut(s) | 49, 58 |
| Bsp143I | GATC | 1 cut(s) | 369 |
| Bsp19I | CCATGG | 1 cut(s) | 25 |
| BspACI | CCGC | 1 cut(s) | 252 |
| BspANI | GGCC | 2 cut(s) | 56, 507 |
| BspCNI | CTCAG | 2 cut(s) | 33, 63 |
| BspLI | GGNNCC | 1 cut(s) | 56 |
| BspMI | ACCTGC | 1 cut(s) | 159 |
| BspTI | CTTAAG | 1 cut(s) | 494 |
| BspTNI | GGTCTC | 1 cut(s) | 451 |
| BsrI | ACTGG | 1 cut(s) | 230 |
| BssECI | CCNNGG | 2 cut(s) | 25, 58 |
| BssMI | GATC | 1 cut(s) | 369 |
| BssT1I | CCWWGG | 2 cut(s) | 25, 58 |
| Bst4CI | ACNGT | 2 cut(s) | 158, 382 |
| Bst6I | CTCTTC | 3 cut(s) | 253, 429, 434 |
| BstAFI | CTTAAG | 1 cut(s) | 494 |
| BstC8I | GCNNGC | 1 cut(s) | 49 |
| BstDEI | CTNAG | 3 cut(s) | 41, 71, 362 |
| BstDSI | CCRYGG | 1 cut(s) | 25 |
| BstF5I | GGATG | 4 cut(s) | 142, 187, 322, 452 |
| BstKTI | GATC | 1 cut(s) | 372 |
| BstMAI | GTCTC | 1 cut(s) | 451 |
| BstMBI | GATC | 1 cut(s) | 369 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 53 |
| BstNSI | RCATGY | 1 cut(s) | 233 |
| BstSCI | CCNGG | 1 cut(s) | 51 |
| BstSFI | CTRYAG | 1 cut(s) | 387 |
| BstSLI | GKGCMC | 1 cut(s) | 58 |
| BstV2I | GAAGAC | 2 cut(s) | 224, 273 |
| BsuRI | GGCC | 2 cut(s) | 56, 507 |
| BtgI | CCRYGG | 1 cut(s) | 25 |
| BtsCI | GGATG | 4 cut(s) | 142, 187, 322, 452 |
| BtsI | GCAGTG | 1 cut(s) | 495 |
| BtsIMutI | CAGTG | 2 cut(s) | 154, 495 |
| BveI | ACCTGC | 1 cut(s) | 159 |
| Cac8I | GCNNGC | 1 cut(s) | 49 |
| Cfr13I | GGNCC | 2 cut(s) | 54, 55 |
| Csp6I | GTAC | 2 cut(s) | 159, 298 |
| CviAII | CATG | 2 cut(s) | 26, 230 |
| CviJI | RGCY | 3 cut(s) | 56, 275, 507 |
| CviKI_1 | RGCY | 3 cut(s) | 56, 275, 507 |
| CviQI | GTAC | 2 cut(s) | 159, 298 |
| DdeI | CTNAG | 3 cut(s) | 41, 71, 362 |
| DpnI | GATC | 1 cut(s) | 371 |
| DpnII | GATC | 1 cut(s) | 369 |
| Eam1104I | CTCTTC | 3 cut(s) | 253, 429, 434 |
| EarI | CTCTTC | 3 cut(s) | 253, 429, 434 |
| Eco130I | CCWWGG | 2 cut(s) | 25, 58 |
| Eco24I | GRGCYC | 1 cut(s) | 58 |
| Eco31I | GGTCTC | 1 cut(s) | 451 |
| EcoO109I | RGGNCCY | 1 cut(s) | 55 |
| EcoT14I | CCWWGG | 2 cut(s) | 25, 58 |
| EcoT38I | GRGCYC | 1 cut(s) | 58 |
| ErhI | CCWWGG | 2 cut(s) | 25, 58 |
| FaeI | CATG | 2 cut(s) | 29, 233 |
| FatI | CATG | 2 cut(s) | 25, 229 |
| FokI | GGATG | 4 cut(s) | 149, 194, 309, 459 |
| FriOI | GRGCYC | 1 cut(s) | 58 |
| FspBI | CTAG | 2 cut(s) | 425, 535 |
| HaeIII | GGCC | 2 cut(s) | 56, 507 |
| HapII | CCGG | 1 cut(s) | 52 |
| Hin1II | CATG | 2 cut(s) | 29, 233 |
| HpaII | CCGG | 1 cut(s) | 52 |
| HphI | GGTGA | 2 cut(s) | 133, 419 |
| Hpy188I | TCNGA | 2 cut(s) | 72, 286 |
| Hpy188III | TCNNGA | 1 cut(s) | 475 |
| HpyAV | CCTTC | 1 cut(s) | 347 |
| HpyCH4III | ACNGT | 2 cut(s) | 158, 382 |
| HpyCH4V | TGCA | 4 cut(s) | 154, 185, 488, 526 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 53 |
| HpyF3I | CTNAG | 3 cut(s) | 41, 71, 362 |
| Hsp92II | CATG | 2 cut(s) | 29, 233 |
| Kzo9I | GATC | 1 cut(s) | 369 |
| LpnPI | CCDG | 6 cut(s) | 65, 164, 211, 240, 294, 375 |
| LweI | GCATC | 1 cut(s) | 172 |
| MaeI | CTAG | 2 cut(s) | 425, 535 |
| MaeIII | GTNAC | 1 cut(s) | 382 |
| MalI | GATC | 1 cut(s) | 371 |
| MboI | GATC | 1 cut(s) | 369 |
| MboII | GAAGA | 5 cut(s) | 229, 240, 273, 446, 451 |
| MfeI | CAATTG | 1 cut(s) | 516 |
| MhlI | GDGCHC | 2 cut(s) | 49, 58 |
| MluCI | AATT | 4 cut(s) | 64, 112, 356, 516 |
| MnlI | CCTC | 7 cut(s) | 66, 112, 127, 412, 435, 471, 523 |
| MroXI | GAANNNNTTC | 1 cut(s) | 291 |
| MseI | TTAA | 2 cut(s) | 243, 495 |
| MslI | CAYNNNNRTG | 1 cut(s) | 264 |
| MspCI | CTTAAG | 1 cut(s) | 494 |
| MspI | CCGG | 1 cut(s) | 52 |
| MspR9I | CCNGG | 1 cut(s) | 53 |
| MunI | CAATTG | 1 cut(s) | 516 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 53 |
| NciI | CCSGG | 1 cut(s) | 53 |
| NcoI | CCATGG | 1 cut(s) | 25 |
| NdeII | GATC | 1 cut(s) | 369 |
| NlaIII | CATG | 2 cut(s) | 29, 233 |
| NlaIV | GGNNCC | 1 cut(s) | 56 |
| NmuCI | GTSAC | 1 cut(s) | 382 |
| NspI | RCATGY | 1 cut(s) | 233 |
| PdmI | GAANNNNTTC | 1 cut(s) | 291 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 31 |
| PsiI | TTATAA | 1 cut(s) | 81 |
| PspN4I | GGNNCC | 1 cut(s) | 56 |
| PspOMI | GGGCCC | 1 cut(s) | 54 |
| PspPI | GGNCC | 2 cut(s) | 54, 55 |
| RsaI | GTAC | 2 cut(s) | 160, 299 |
| RsaNI | GTAC | 2 cut(s) | 159, 298 |
| RseI | CAYNNNNRTG | 1 cut(s) | 264 |
| SaqAI | TTAA | 2 cut(s) | 243, 495 |
| Sau3AI | GATC | 1 cut(s) | 369 |
| Sau96I | GGNCC | 2 cut(s) | 54, 55 |
| ScrFI | CCNGG | 1 cut(s) | 53 |
| SduI | GDGCHC | 2 cut(s) | 49, 58 |
| SetI | ASST | 7 cut(s) | 123, 153, 313, 339, 394, 423, 482 |
| SfaNI | GCATC | 1 cut(s) | 172 |
| SfcI | CTRYAG | 1 cut(s) | 387 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 264 |
| SmlI | CTYRAG | 2 cut(s) | 475, 494 |
| SmoI | CTYRAG | 2 cut(s) | 475, 494 |
| Sse9I | AATT | 4 cut(s) | 64, 112, 356, 516 |
| SsiI | CCGC | 1 cut(s) | 252 |
| SspI | AATATT | 1 cut(s) | 91 |
| SspMI | CTAG | 2 cut(s) | 425, 535 |
| StyD4I | CCNGG | 1 cut(s) | 51 |
| StyI | CCWWGG | 2 cut(s) | 25, 58 |
| TaaI | ACNGT | 2 cut(s) | 158, 382 |
| TasI | AATT | 4 cut(s) | 64, 112, 356, 516 |
| TatI | WGTACW | 1 cut(s) | 158 |
| Tru1I | TTAA | 2 cut(s) | 243, 495 |
| Tru9I | TTAA | 2 cut(s) | 243, 495 |
| TscAI | CASTG | 2 cut(s) | 161, 495 |
| TseFI | GTSAC | 1 cut(s) | 382 |
| Tsp45I | GTSAC | 1 cut(s) | 382 |
| TspDTI | ATGAA | 1 cut(s) | 224 |
| TspRI | CASTG | 2 cut(s) | 161, 495 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 31 |
| Vha464I | CTTAAG | 1 cut(s) | 494 |
| XapI | RAATTY | 1 cut(s) | 64 |
| XceI | RCATGY | 1 cut(s) | 233 |
| XmnI | GAANNNNTTC | 1 cut(s) | 291 |
| XspI | CTAG | 2 cut(s) | 425, 535 |