ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 33 |
| AclWI | GGATC | 1 cut(s) | 252 |
| AcuI | CTGAAG | 1 cut(s) | 300 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 162 |
| AgeI | ACCGGT | 1 cut(s) | 320 |
| AgsI | TTSAA | 2 cut(s) | 23, 53 |
| Alw26I | GTCTC | 1 cut(s) | 85 |
| AlwI | GGATC | 1 cut(s) | 252 |
| ApeKI | GCWGC | 3 cut(s) | 4, 193, 338 |
| AsiGI | ACCGGT | 1 cut(s) | 320 |
| AspLEI | GCGC | 1 cut(s) | 148 |
| AspS9I | GGNCC | 1 cut(s) | 79 |
| AsuHPI | GGTGA | 1 cut(s) | 310 |
| AvaII | GGWCC | 1 cut(s) | 79 |
| BbvI | GCAGC | 2 cut(s) | 205, 325 |
| BclI | TGATCA | 1 cut(s) | 138 |
| BcoDI | GTCTC | 1 cut(s) | 85 |
| BfaI | CTAG | 4 cut(s) | 122, 161, 255, 342 |
| BglII | AGATCT | 1 cut(s) | 251 |
| BisI | GCNGC | 3 cut(s) | 5, 194, 339 |
| BlsI | GCNGC | 3 cut(s) | 6, 195, 340 |
| Bme18I | GGWCC | 1 cut(s) | 79 |
| BmgT120I | GGNCC | 1 cut(s) | 79 |
| BsaI | GGTCTC | 1 cut(s) | 85 |
| BsaWI | WCCGGW | 1 cut(s) | 320 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 162 |
| Bse118I | RCCGGY | 1 cut(s) | 320 |
| BseGI | GGATG | 1 cut(s) | 152 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BseMII | CTCAG | 2 cut(s) | 218, 262 |
| BseXI | GCAGC | 2 cut(s) | 205, 325 |
| BsgI | GTGCAG | 1 cut(s) | 246 |
| BshTI | ACCGGT | 1 cut(s) | 320 |
| BsiSI | CCGG | 1 cut(s) | 321 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BsmAI | GTCTC | 1 cut(s) | 85 |
| Bso31I | GGTCTC | 1 cut(s) | 85 |
| Bsp143I | GATC | 3 cut(s) | 138, 244, 251 |
| BspACI | CCGC | 1 cut(s) | 33 |
| BspCNI | CTCAG | 2 cut(s) | 217, 261 |
| BspPI | GGATC | 1 cut(s) | 252 |
| BspTNI | GGTCTC | 1 cut(s) | 85 |
| BsrFI | RCCGGY | 1 cut(s) | 320 |
| BssAI | RCCGGY | 1 cut(s) | 320 |
| BssMI | GATC | 3 cut(s) | 138, 244, 251 |
| BstDEI | CTNAG | 3 cut(s) | 87, 204, 248 |
| BstF5I | GGATG | 1 cut(s) | 152 |
| BstHHI | GCGC | 1 cut(s) | 148 |
| BstKTI | GATC | 3 cut(s) | 141, 247, 254 |
| BstMAI | GTCTC | 1 cut(s) | 85 |
| BstMBI | GATC | 3 cut(s) | 138, 244, 251 |
| BstV1I | GCAGC | 2 cut(s) | 205, 325 |
| BstX2I | RGATCY | 2 cut(s) | 244, 251 |
| BstYI | RGATCY | 2 cut(s) | 244, 251 |
| BtsCI | GGATG | 1 cut(s) | 152 |
| CfoI | GCGC | 1 cut(s) | 148 |
| Cfr10I | RCCGGY | 1 cut(s) | 320 |
| Cfr13I | GGNCC | 1 cut(s) | 79 |
| CseI | GACGC | 1 cut(s) | 284 |
| CspAI | ACCGGT | 1 cut(s) | 320 |
| CviAII | CATG | 2 cut(s) | 83, 239 |
| CviJI | RGCY | 1 cut(s) | 113 |
| CviKI_1 | RGCY | 1 cut(s) | 113 |
| DdeI | CTNAG | 3 cut(s) | 87, 204, 248 |
| DpnI | GATC | 3 cut(s) | 140, 246, 253 |
| DpnII | GATC | 3 cut(s) | 138, 244, 251 |
| Eco31I | GGTCTC | 1 cut(s) | 85 |
| Eco47I | GGWCC | 1 cut(s) | 79 |
| Eco57I | CTGAAG | 1 cut(s) | 300 |
| FaeI | CATG | 2 cut(s) | 86, 242 |
| FaiI | YATR | 4 cut(s) | 84, 240, 270, 330 |
| FatI | CATG | 2 cut(s) | 82, 238 |
| FauI | CCCGC | 1 cut(s) | 26 |
| FbaI | TGATCA | 1 cut(s) | 138 |
| Fnu4HI | GCNGC | 3 cut(s) | 5, 194, 339 |
| FokI | GGATG | 1 cut(s) | 139 |
| Fsp4HI | GCNGC | 3 cut(s) | 5, 194, 339 |
| FspBI | CTAG | 4 cut(s) | 122, 161, 255, 342 |
| GlaI | GCGC | 1 cut(s) | 147 |
| GluI | GCNGC | 3 cut(s) | 5, 194, 339 |
| HapII | CCGG | 1 cut(s) | 321 |
| HgaI | GACGC | 1 cut(s) | 284 |
| HhaI | GCGC | 1 cut(s) | 148 |
| Hin1II | CATG | 2 cut(s) | 86, 242 |
| Hin6I | GCGC | 1 cut(s) | 146 |
| HinP1I | GCGC | 1 cut(s) | 146 |
| HincII | GTYRAC | 1 cut(s) | 46 |
| HindII | GTYRAC | 1 cut(s) | 46 |
| HpaI | GTTAAC | 1 cut(s) | 46 |
| HpaII | CCGG | 1 cut(s) | 321 |
| HphI | GGTGA | 1 cut(s) | 310 |
| Hpy166II | GTNNAC | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 1 cut(s) | 251 |
| Hpy8I | GTNNAC | 1 cut(s) | 46 |
| HpyAV | CCTTC | 1 cut(s) | 291 |
| HpyCH4IV | ACGT | 1 cut(s) | 61 |
| HpyCH4V | TGCA | 2 cut(s) | 7, 263 |
| HpyF3I | CTNAG | 3 cut(s) | 87, 204, 248 |
| HpySE526I | ACGT | 1 cut(s) | 61 |
| Hsp92II | CATG | 2 cut(s) | 86, 242 |
| HspAI | GCGC | 1 cut(s) | 146 |
| Ksp22I | TGATCA | 1 cut(s) | 138 |
| KspAI | GTTAAC | 1 cut(s) | 46 |
| Kzo9I | GATC | 3 cut(s) | 138, 244, 251 |
| LpnPI | CCDG | 2 cut(s) | 191, 334 |
| Lsp1109I | GCAGC | 2 cut(s) | 205, 325 |
| MaeI | CTAG | 4 cut(s) | 122, 161, 255, 342 |
| MaeII | ACGT | 1 cut(s) | 61 |
| MalI | GATC | 3 cut(s) | 140, 246, 253 |
| MboI | GATC | 3 cut(s) | 138, 244, 251 |
| MboII | GAAGA | 1 cut(s) | 97 |
| MflI | RGATCY | 2 cut(s) | 244, 251 |
| MnlI | CCTC | 2 cut(s) | 110, 283 |
| MseI | TTAA | 1 cut(s) | 45 |
| MspI | CCGG | 1 cut(s) | 321 |
| NdeII | GATC | 3 cut(s) | 138, 244, 251 |
| NlaIII | CATG | 2 cut(s) | 86, 242 |
| PinAI | ACCGGT | 1 cut(s) | 320 |
| PkrI | GCNGC | 3 cut(s) | 6, 195, 340 |
| PspPI | GGNCC | 1 cut(s) | 79 |
| PsuI | RGATCY | 2 cut(s) | 244, 251 |
| SaqAI | TTAA | 1 cut(s) | 45 |
| SatI | GCNGC | 3 cut(s) | 5, 194, 339 |
| Sau3AI | GATC | 3 cut(s) | 138, 244, 251 |
| Sau96I | GGNCC | 1 cut(s) | 79 |
| SetI | ASST | 6 cut(s) | 51, 64, 97, 102, 260, 294 |
| SinI | GGWCC | 1 cut(s) | 79 |
| SsiI | CCGC | 1 cut(s) | 33 |
| SspI | AATATT | 1 cut(s) | 178 |
| SspMI | CTAG | 4 cut(s) | 122, 161, 255, 342 |
| TaiI | ACGT | 1 cut(s) | 64 |
| Tru1I | TTAA | 1 cut(s) | 45 |
| Tru9I | TTAA | 1 cut(s) | 45 |
| TseI | GCWGC | 3 cut(s) | 4, 193, 338 |
| TspDTI | ATGAA | 1 cut(s) | 318 |
| VpaK11BI | GGWCC | 1 cut(s) | 79 |
| XspI | CTAG | 4 cut(s) | 122, 161, 255, 342 |