Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 122, 224 |
| AclWI | GGATC | 1 cut(s) | 27 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 125 |
| AgsI | TTSAA | 2 cut(s) | 305, 346 |
| AhlI | ACTAGT | 1 cut(s) | 290 |
| AluBI | AGCT | 1 cut(s) | 17 |
| AluI | AGCT | 1 cut(s) | 17 |
| AlwI | GGATC | 1 cut(s) | 27 |
| ApeKI | GCWGC | 1 cut(s) | 192 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 273 |
| AsuHPI | GGTGA | 1 cut(s) | 89 |
| BbsI | GAAGAC | 1 cut(s) | 14 |
| BbvI | GCAGC | 1 cut(s) | 179 |
| BcuI | ACTAGT | 1 cut(s) | 290 |
| BfaI | CTAG | 1 cut(s) | 291 |
| BisI | GCNGC | 1 cut(s) | 193 |
| BlsI | GCNGC | 1 cut(s) | 194 |
| BpiI | GAAGAC | 1 cut(s) | 14 |
| BpmI | CTGGAG | 1 cut(s) | 112 |
| BsaJI | CCNNGG | 1 cut(s) | 185 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 125 |
| Bse1I | ACTGG | 1 cut(s) | 95 |
| BseDI | CCNNGG | 1 cut(s) | 185 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BseNI | ACTGG | 1 cut(s) | 95 |
| BseRI | GAGGAG | 1 cut(s) | 323 |
| BseXI | GCAGC | 1 cut(s) | 179 |
| BsiSI | CCGG | 1 cut(s) | 119 |
| BslFI | GGGAC | 1 cut(s) | 215 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BsmFI | GGGAC | 1 cut(s) | 215 |
| Bsp143I | GATC | 2 cut(s) | 32, 55 |
| Bsp19I | CCATGG | 1 cut(s) | 185 |
| BspACI | CCGC | 2 cut(s) | 122, 224 |
| BspPI | GGATC | 1 cut(s) | 27 |
| BsrI | ACTGG | 1 cut(s) | 95 |
| BssECI | CCNNGG | 1 cut(s) | 185 |
| BssMI | GATC | 2 cut(s) | 32, 55 |
| BssT1I | CCWWGG | 1 cut(s) | 185 |
| Bst4CI | ACNGT | 1 cut(s) | 162 |
| Bst6I | CTCTTC | 2 cut(s) | 46, 341 |
| BstDSI | CCRYGG | 1 cut(s) | 185 |
| BstKTI | GATC | 2 cut(s) | 35, 58 |
| BstMBI | GATC | 2 cut(s) | 32, 55 |
| BstV1I | GCAGC | 1 cut(s) | 179 |
| BstV2I | GAAGAC | 1 cut(s) | 14 |
| BtgI | CCRYGG | 1 cut(s) | 185 |
| BtsIMutI | CAGTG | 1 cut(s) | 88 |
| CviAII | CATG | 3 cut(s) | 186, 196, 349 |
| CviJI | RGCY | 1 cut(s) | 17 |
| CviKI_1 | RGCY | 1 cut(s) | 17 |
| DpnI | GATC | 2 cut(s) | 34, 57 |
| DpnII | GATC | 2 cut(s) | 32, 55 |
| Eam1104I | CTCTTC | 2 cut(s) | 46, 341 |
| EarI | CTCTTC | 2 cut(s) | 46, 341 |
| EciI | GGCGGA | 1 cut(s) | 137 |
| Eco130I | CCWWGG | 1 cut(s) | 185 |
| EcoT14I | CCWWGG | 1 cut(s) | 185 |
| ErhI | CCWWGG | 1 cut(s) | 185 |
| FaeI | CATG | 3 cut(s) | 189, 199, 352 |
| FaiI | YATR | 7 cut(s) | 51, 111, 138, 187, 197, 350, 361 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 304, 336 |
| FaqI | GGGAC | 1 cut(s) | 215 |
| FatI | CATG | 3 cut(s) | 185, 195, 348 |
| Fnu4HI | GCNGC | 1 cut(s) | 193 |
| Fsp4HI | GCNGC | 1 cut(s) | 193 |
| FspBI | CTAG | 1 cut(s) | 291 |
| GluI | GCNGC | 1 cut(s) | 193 |
| GsuI | CTGGAG | 1 cut(s) | 112 |
| HapII | CCGG | 1 cut(s) | 119 |
| Hin1II | CATG | 3 cut(s) | 189, 199, 352 |
| HpaII | CCGG | 1 cut(s) | 119 |
| HphI | GGTGA | 1 cut(s) | 89 |
| Hpy166II | GTNNAC | 1 cut(s) | 257 |
| Hpy188III | TCNNGA | 2 cut(s) | 59, 305 |
| Hpy8I | GTNNAC | 1 cut(s) | 257 |
| HpyAV | CCTTC | 3 cut(s) | 112, 230, 263 |
| HpyCH4III | ACNGT | 1 cut(s) | 162 |
| HpyCH4V | TGCA | 1 cut(s) | 195 |
| Hsp92II | CATG | 3 cut(s) | 189, 199, 352 |
| Kzo9I | GATC | 2 cut(s) | 32, 55 |
| LpnPI | CCDG | 4 cut(s) | 44, 76, 132, 218 |
| Lsp1109I | GCAGC | 1 cut(s) | 179 |
| MaeI | CTAG | 1 cut(s) | 291 |
| MaeIII | GTNAC | 2 cut(s) | 27, 97 |
| MalI | GATC | 2 cut(s) | 34, 57 |
| MboI | GATC | 2 cut(s) | 32, 55 |
| MboII | GAAGA | 3 cut(s) | 19, 33, 328 |
| MluCI | AATT | 2 cut(s) | 172, 178 |
| MnlI | CCTC | 7 cut(s) | 62, 118, 205, 220, 233, 341, 344 |
| MroXI | GAANNNNTTC | 1 cut(s) | 273 |
| MseI | TTAA | 4 cut(s) | 164, 207, 311, 354 |
| MspI | CCGG | 1 cut(s) | 119 |
| NcoI | CCATGG | 1 cut(s) | 185 |
| NdeII | GATC | 2 cut(s) | 32, 55 |
| NlaIII | CATG | 3 cut(s) | 189, 199, 352 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 256 |
| PdmI | GAANNNNTTC | 1 cut(s) | 273 |
| PkrI | GCNGC | 1 cut(s) | 194 |
| SaqAI | TTAA | 4 cut(s) | 164, 207, 311, 354 |
| SatI | GCNGC | 1 cut(s) | 193 |
| Sau3AI | GATC | 2 cut(s) | 32, 55 |
| SetI | ASST | 6 cut(s) | 19, 104, 216, 274, 317, 333 |
| SgeI | CNNG | 9 cut(s) | 71, 103, 131, 156, 198, 208, 245, 303, 317 |
| SpeI | ACTAGT | 1 cut(s) | 290 |
| Sse9I | AATT | 2 cut(s) | 172, 178 |
| SsiI | CCGC | 2 cut(s) | 122, 224 |
| SspMI | CTAG | 1 cut(s) | 291 |
| StyI | CCWWGG | 1 cut(s) | 185 |
| TaaI | ACNGT | 1 cut(s) | 162 |
| TaqI | TCGA | 1 cut(s) | 157 |
| TasI | AATT | 2 cut(s) | 172, 178 |
| Tru1I | TTAA | 4 cut(s) | 164, 207, 311, 354 |
| Tru9I | TTAA | 4 cut(s) | 164, 207, 311, 354 |
| TscAI | CASTG | 1 cut(s) | 95 |
| TseI | GCWGC | 1 cut(s) | 192 |
| TspGWI | ACGGA | 1 cut(s) | 26 |
| TspRI | CASTG | 1 cut(s) | 95 |
| XmnI | GAANNNNTTC | 1 cut(s) | 273 |
| XspI | CTAG | 1 cut(s) | 291 |