Rmu_sc0003337.1_g000037

Ribonuclease H protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003337.1
Physical Location & Seq
Forward (+)
152743 .. 154414
1672 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003337.1_g000037.1.cds

Sequence Viewer

Length: 1149 bp
atgaaatctgaagctgaagcagtggtgaaaggtcttcagctagctgcgtatttgaagctccagaatatcatcttagaaggagactgccaggaggtcttacttgctcttgacaaccatggtgactgtcgccccaaattggaggatctccccattgatcaacaagatgcggcggtgaagcttgccaagttgaggttgtgctctcaggattgggccgacagggtctacttagagactcactatacaaaactgcagcaccagtcactcttaaaatcgactggcctttctcagattgcttacttcgatcatgttgacagagcaggtgggttggctttgttatgggatgcctccatctctgtcaatgtcagaatggttgatcgctacttcattgatgcgattatgaagggtctagaccaagtggaatggcgtttcaccggtttctacagacaccctgagactgagcagcgtcataacttgtgggatttgcttaggtccttagccctggatccgctagagaggttggttgttgcaagggattttaatgagattttggagttgggggagaaatcaggtggaaggcttcagaatctagggcagatgcaggccttccgtcaagcattgacagactgtcatttggaagacatgggggcttctggagggttgtatacttggtgtgattctgggacgaaagaaaggctggacagatgcactgcttcctctacgtggtgggctgctttcggtttttcgagagtcgtacatttgcatcctagctggtctgatcatgttcctctattactagaagtacgctgtgttccaccggtgcatgagcgacggagaagacagttccggtttgaggagatgtggtgcacccatgacggtttttctcagaaggtagaggaagcctggaatgtaccttctaccggggatcctatggtgtatatctgtcgaaaaattaagggggttggccaacagctacttgcctgggatcaaactgtgtttcagagccgtaggattgaagtggacgtgattcggtcacaactcaaagacttgttgcagaaatcttttgaccaggctgaccacgaggccaagttgcagctatctaaaaagctacatgagttaatgtctattgatgaaacttactggcgccaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

382

Amino Acids

44.19

Weight (kDa)

5.98

Isoelectric Point (pI)

45.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000016)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14281 FvH4_1g17621 FvH4_1g18471 FvH4_1g22021 FvH4_1g26014 FvH4_1g26331 FvH4_1g26332 FvH4_1g27351 FvH4_2g04721 FvH4_3g23731 FvH4_4g01641 FvH4_4g08952 FvH4_5g04831 FvH4_5g06181 FvH4_5g24782 FvH4_6g19793 FvH4_6g21830 FvH4_6g22052 FvH4_6g22781 FvH4_6g28711 FvH4_6g38132 FvH4_7g01611 FvH4_7g04461 FvH4_7g10253
malus_domestica MD12G1214900.v1.1
prunus_persica Prupe.1G178300_v2.0.a1 Prupe.2G081900_v2.0.a1 Prupe.7G035400_v2.0.a1 Prupe.8G101400_v2.0.a1
pyrus_communis pycom1094g00140 pycom11g05210 pycom15g38150
rosa_chinensis RchiOBHm_Chr0c45g0503781 RchiOBHm_Chr2g0127321 RchiOBHm_Chr2g0136131 RchiOBHm_Chr2g0137531 RchiOBHm_Chr3g0458071 RchiOBHm_Chr3g0468741 RchiOBHm_Chr4g0385261 RchiOBHm_Chr4g0398301 RchiOBHm_Chr4g0414741 RchiOBHm_Chr4g0427601 RchiOBHm_Chr5g0038191 RchiOBHm_Chr6g0264691 RchiOBHm_Chr7g0222611
rosa_laevigata RLG00000000450 RLG00000012411 RLG00000013342 RLG00000014003 RLG00000014274 RLG00000015222 RLG00000015327 RLG00000017257 RLG00000018284 RLG00000018325 RLG00000021633 RLG00000030959 RLG00000031522 RLG00000031692 RLG00000034534 RLG00000034656 RLG00000034719 RLG00000034775 RLG00000035707 RLG00000035994 RLG00000036662
rosa_multiflora Rmu_co7958827.1_g000001 Rmu_co7982736.1_g000001 Rmu_co7994068.1_g000001 Rmu_co8004766.1_g000001 Rmu_co8055616.1_g000001 Rmu_co8065842.1_g000001 Rmu_co8075422.1_g000001 Rmu_co8115052.1_g000001 Rmu_co8123540.1_g000001 Rmu_co8130588.1_g000001 Rmu_co8141300.1_g000001 Rmu_co8175458.1_g000001 Rmu_co8181142.1_g000001 Rmu_co8186168.1_g000001 Rmu_co8186320.1_g000001 Rmu_co8193972.1_g000001 Rmu_co8218810.1_g000001 Rmu_co8231243.1_g000001 Rmu_co8235827.1_g000001 Rmu_co8238175.1_g000001 Rmu_co8252519.1_g000001 Rmu_co8277813.1_g000001 Rmu_co8305149.1_g000001 Rmu_co8330153.1_g000001 Rmu_co8337761.1_g000001 Rmu_co8342667.1_g000001 Rmu_co8342835.1_g000001 Rmu_co8350369.1_g000001 Rmu_co8364117.1_g000001 Rmu_co8396865.1_g000001 Rmu_co8397583.1_g000001 Rmu_co8402971.1_g000001 Rmu_co8412027.1_g000001 Rmu_co8412027.1_g000002 Rmu_co8426061.1_g000001 Rmu_co8426061.1_g000002 Rmu_co8432275.1_g000001 Rmu_co8439531.1_g000001 Rmu_co8445913.1_g000001 Rmu_co8449645.1_g000001 Rmu_co8455737.1_g000001 Rmu_co8459617.1_g000001 Rmu_co8465509.1_g000001 Rmu_co8471819.1_g000001 Rmu_co8481247.1_g000001 Rmu_co8504529.1_g000001 Rmu_co8509881.1_g000001 Rmu_co8513417.1_g000001 Rmu_co8519167.1_g000002 Rmu_sc0000028.1_g000006 Rmu_sc0000030.1_g000003 Rmu_sc0000047.1_g000031 Rmu_sc0000084.1_g000023 Rmu_sc0000166.1_g000048 Rmu_sc0000335.1_g000038 Rmu_sc0000361.1_g000054 Rmu_sc0000363.1_g000059 Rmu_sc0000365.1_g000045 Rmu_sc0000367.1_g000153 Rmu_sc0000367.1_g000156 Rmu_sc0000367.1_g000157 Rmu_sc0000370.1_g000020 Rmu_sc0000371.1_g000009 Rmu_sc0000371.1_g000010 Rmu_sc0000371.1_g000037 Rmu_sc0000388.1_g000042 Rmu_sc0000388.1_g000051 Rmu_sc0000388.1_g000060 Rmu_sc0000395.1_g000004 Rmu_sc0000395.1_g000005 Rmu_sc0000447.1_g000006 Rmu_sc0000487.1_g000076 Rmu_sc0000499.1_g000009 Rmu_sc0000508.1_g000007 Rmu_sc0000511.1_g000014 Rmu_sc0000511.1_g000015 Rmu_sc0000516.1_g000028 Rmu_sc0000540.1_g000059 Rmu_sc0000543.1_g000053 Rmu_sc0000556.1_g000011 Rmu_sc0000565.1_g000039 Rmu_sc0000574.1_g000015 Rmu_sc0000575.1_g000008 Rmu_sc0000586.1_g000010 Rmu_sc0000663.1_g000017 Rmu_sc0000676.1_g000012 Rmu_sc0000717.1_g000020 Rmu_sc0000744.1_g000048 Rmu_sc0000764.1_g000004 Rmu_sc0000795.1_g000004 Rmu_sc0000805.1_g000018 Rmu_sc0000805.1_g000034 Rmu_sc0000806.1_g000035 Rmu_sc0000806.1_g000036 Rmu_sc0000838.1_g000013 Rmu_sc0000901.1_g000012 Rmu_sc0001062.1_g000012 Rmu_sc0001075.1_g000024 Rmu_sc0001126.1_g000009 Rmu_sc0001136.1_g000047 Rmu_sc0001143.1_g000025 Rmu_sc0001211.1_g000064 Rmu_sc0001291.1_g000032 Rmu_sc0001385.1_g000001 Rmu_sc0001387.1_g000007 Rmu_sc0001405.1_g000010 Rmu_sc0001433.1_g000034 Rmu_sc0001468.1_g000005 Rmu_sc0001516.1_g000071 Rmu_sc0001544.1_g000029 Rmu_sc0001556.1_g000005 Rmu_sc0001565.1_g000015 Rmu_sc0001569.1_g000001 Rmu_sc0001572.1_g000021 Rmu_sc0001619.1_g000008 Rmu_sc0001623.1_g000004 Rmu_sc0001625.1_g000004 Rmu_sc0001631.1_g000011 Rmu_sc0001653.1_g000032 Rmu_sc0001654.1_g000022 Rmu_sc0001701.1_g000018 Rmu_sc0001749.1_g000001 Rmu_sc0001764.1_g000002 Rmu_sc0001764.1_g000003 Rmu_sc0001793.1_g000058 Rmu_sc0001793.1_g000059 Rmu_sc0001836.1_g000041 Rmu_sc0001850.1_g000008 Rmu_sc0001911.1_g000004 Rmu_sc0002070.1_g000016 Rmu_sc0002070.1_g000032 Rmu_sc0002094.1_g000003 Rmu_sc0002107.1_g000010 Rmu_sc0002116.1_g000005 Rmu_sc0002132.1_g000014 Rmu_sc0002138.1_g000003 Rmu_sc0002192.1_g000015 Rmu_sc0002244.1_g000047 Rmu_sc0002269.1_g000020 Rmu_sc0002271.1_g000008 Rmu_sc0002283.1_g000011 Rmu_sc0002343.1_g000061 Rmu_sc0002343.1_g000074 Rmu_sc0002369.1_g000002 Rmu_sc0002403.1_g000003 Rmu_sc0002425.1_g000011 Rmu_sc0002425.1_g000012 Rmu_sc0002447.1_g000017 Rmu_sc0002494.1_g000013 Rmu_sc0002515.1_g000006 Rmu_sc0002515.1_g000007 Rmu_sc0002529.1_g000018 Rmu_sc0002556.1_g000010 Rmu_sc0002586.1_g000010 Rmu_sc0002693.1_g000012 Rmu_sc0002725.1_g000002 Rmu_sc0002738.1_g000006 Rmu_sc0002754.1_g000037 Rmu_sc0002776.1_g000038 Rmu_sc0002793.1_g000008 Rmu_sc0002840.1_g000003 Rmu_sc0002843.1_g000013 Rmu_sc0002843.1_g000014 Rmu_sc0002848.1_g000015 Rmu_sc0002858.1_g000011 Rmu_sc0002927.1_g000005 Rmu_sc0002955.1_g000018 Rmu_sc0002964.1_g000006 Rmu_sc0002986.1_g000055 Rmu_sc0003064.1_g000003 Rmu_sc0003110.1_g000023 Rmu_sc0003124.1_g000014 Rmu_sc0003226.1_g000009 Rmu_sc0003337.1_g000037 Rmu_sc0003387.1_g000002 Rmu_sc0003443.1_g000021 Rmu_sc0003475.1_g000023 Rmu_sc0003669.1_g000033 Rmu_sc0003722.1_g000039 Rmu_sc0003804.1_g000008 Rmu_sc0003804.1_g000009 Rmu_sc0003809.1_g000015 Rmu_sc0003858.1_g000005 Rmu_sc0003919.1_g000010 Rmu_sc0003919.1_g000011 Rmu_sc0004010.1_g000015 Rmu_sc0004036.1_g000004 Rmu_sc0004086.1_g000014 Rmu_sc0004115.1_g000017 Rmu_sc0004133.1_g000013 Rmu_sc0004139.1_g000002 Rmu_sc0004154.1_g000016 Rmu_sc0004165.1_g000088 Rmu_sc0004206.1_g000010 Rmu_sc0004212.1_g000006 Rmu_sc0004213.1_g000007 Rmu_sc0004331.1_g000018 Rmu_sc0004469.1_g000002 Rmu_sc0004565.1_g000004 Rmu_sc0004574.1_g000059 Rmu_sc0004591.1_g000009 Rmu_sc0004610.1_g000004 Rmu_sc0004610.1_g000005 Rmu_sc0004683.1_g000008 Rmu_sc0004723.1_g000003 Rmu_sc0004795.1_g000006 Rmu_sc0004825.1_g000009 Rmu_sc0004841.1_g000043 Rmu_sc0005039.1_g000005 Rmu_sc0005046.1_g000017 Rmu_sc0005173.1_g000012 Rmu_sc0005197.1_g000005 Rmu_sc0005255.1_g000043 Rmu_sc0005285.1_g000010 Rmu_sc0005310.1_g000051 Rmu_sc0005379.1_g000004 Rmu_sc0005385.1_g000015 Rmu_sc0005416.1_g000030 Rmu_sc0005652.1_g000015 Rmu_sc0005745.1_g000015 Rmu_sc0005748.1_g000007 Rmu_sc0005913.1_g000013 Rmu_sc0005950.1_g000016 Rmu_sc0006028.1_g000010 Rmu_sc0006153.1_g000025 Rmu_sc0006184.1_g000021 Rmu_sc0006240.1_g000001 Rmu_sc0006266.1_g000058 Rmu_sc0006323.1_g000013 Rmu_sc0006410.1_g000011 Rmu_sc0006452.1_g000010 Rmu_sc0006537.1_g000008 Rmu_sc0006669.1_g000011 Rmu_sc0006683.1_g000017 Rmu_sc0006691.1_g000004 Rmu_sc0006691.1_g000005 Rmu_sc0006743.1_g000004 Rmu_sc0006793.1_g000001 Rmu_sc0006793.1_g000002 Rmu_sc0006824.1_g000020 Rmu_sc0006959.1_g000018 Rmu_sc0007006.1_g000003 Rmu_sc0007130.1_g000009 Rmu_sc0007221.1_g000004 Rmu_sc0007222.1_g000004 Rmu_sc0007237.1_g000007 Rmu_sc0007292.1_g000013 Rmu_sc0007402.1_g000004 Rmu_sc0007475.1_g000009 Rmu_sc0007635.1_g000001 Rmu_sc0007742.1_g000023 Rmu_sc0007742.1_g000024 Rmu_sc0007802.1_g000033 Rmu_sc0007833.1_g000002 Rmu_sc0007994.1_g000002 Rmu_sc0007994.1_g000003 Rmu_sc0008079.1_g000002 Rmu_sc0008192.1_g000009 Rmu_sc0008529.1_g000021 Rmu_sc0008546.1_g000003 Rmu_sc0008564.1_g000001 Rmu_sc0008676.1_g000026 Rmu_sc0008713.1_g000017 Rmu_sc0008834.1_g000004 Rmu_sc0008967.1_g000017 Rmu_sc0009073.1_g000001 Rmu_sc0009449.1_g000002 Rmu_sc0009674.1_g000003 Rmu_sc0009725.1_g000006 Rmu_sc0010019.1_g000012 Rmu_sc0010132.1_g000034 Rmu_sc0010190.1_g000005 Rmu_sc0010221.1_g000003 Rmu_sc0010224.1_g000002 Rmu_sc0010242.1_g000005 Rmu_sc0010262.1_g000002 Rmu_sc0010338.1_g000011 Rmu_sc0010368.1_g000003 Rmu_sc0010533.1_g000001 Rmu_sc0011216.1_g000005 Rmu_sc0011272.1_g000003 Rmu_sc0011582.1_g000011 Rmu_sc0011585.1_g000002 Rmu_sc0011851.1_g000003 Rmu_sc0011851.1_g000006 Rmu_sc0011917.1_g000001 Rmu_sc0012031.1_g000005 Rmu_sc0012591.1_g000001 Rmu_sc0012856.1_g000014 Rmu_sc0013107.1_g000001 Rmu_sc0013545.1_g000001 Rmu_sc0013783.1_g000005 Rmu_sc0013801.1_g000004 Rmu_sc0013980.1_g000004 Rmu_sc0014006.1_g000006 Rmu_sc0014097.1_g000013 Rmu_sc0014404.1_g000011 Rmu_sc0015273.1_g000001 Rmu_sc0015957.1_g000003 Rmu_sc0015996.1_g000001 Rmu_sc0016141.1_g000011 Rmu_sc0016264.1_g000003 Rmu_sc0017005.1_g000007 Rmu_sc0017112.1_g000001 Rmu_sc0017245.1_g000001 Rmu_sc0018139.1_g000001 Rmu_sc0018325.1_g000007 Rmu_sc0018528.1_g000005 Rmu_sc0018646.1_g000003 Rmu_sc0019157.1_g000002 Rmu_sc0019342.1_g000001 Rmu_sc0019693.1_g000001 Rmu_sc0019742.1_g000003 Rmu_sc0020648.1_g000001 Rmu_sc0021123.1_g000002 Rmu_sc0022252.1_g000001 Rmu_sc0022252.1_g000002 Rmu_sc0023534.1_g000004 Rmu_sc0023853.1_g000003 Rmu_sc0024187.1_g000001 Rmu_sc0024395.1_g000001 Rmu_sc0024668.1_g000001 Rmu_sc0025262.1_g000001 Rmu_sc0026159.1_g000001 Rmu_sc0026159.1_g000002 Rmu_sc0026590.1_g000003 Rmu_sc0027036.1_g000008 Rmu_sc0027184.1_g000006 Rmu_sc0027690.1_g000002 Rmu_sc0030913.1_g000001 Rmu_sc0032471.1_g000002 Rmu_sc0033139.1_g000001 Rmu_sc0033765.1_g000002 Rmu_sc0034257.1_g000002 Rmu_sc0034655.1_g000001 Rmu_sc0035277.1_g000001 Rmu_sc0035833.1_g000001 Rmu_sc0037386.1_g000002 Rmu_sc0042113.1_g000001 Rmu_sc0042241.1_g000001 Rmu_ssc0000011.1_g000022 Rmu_ssc0000026.1_g000004 Rmu_ssc0000042.1_g000015 Rmu_ssc0000071.1_g000003 Rmu_ssc0000087.1_g000002 Rmu_ssc0000091.1_g000023 Rmu_ssc0000120.1_g000002 Rmu_ssc0000127.1_g000002 Rmu_ssc0000151.1_g000019 Rmu_ssc0000197.1_g000021 Rmu_ssc0000215.1_g000014 Rmu_ssc0000240.1_g000011 Rmu_ssc0000252.1_g000035 Rmu_ssc0000255.1_g000075 Rmu_ssc0000377.1_g000026 Rmu_ssc0000388.1_g000055 Rmu_ssc0000391.1_g000010 Rmu_ssc0000395.1_g000043 Rmu_ssc0000432.1_g000011 Rmu_ssc0000432.1_g000045 Rmu_ssc0000432.1_g000084
rosa_roxburghii Rroxscaffold_1G00003990 Rroxscaffold_1G00032350 Rroxscaffold_2G00104520 Rroxscaffold_2G00114410 Rroxscaffold_3G00261440 Rroxscaffold_5G00340750 Rroxscaffold_5G00344400 Rroxscaffold_5G00360340 Rroxscaffold_6G00400850 Rroxscaffold_7G00187980 Rroxscaffold_7G00191360
rosa_rugosa Rorug01G0062600 Rorug01G0235400 Rorug01G0286700 Rorug01G0286800 Rorug01G0332400 Rorug01G0332900 Rorug02G0087500 Rorug02G0110000.1 Rorug02G0114100 Rorug02G0262600 Rorug02G0330000 Rorug03G0232500 Rorug04G0022800 Rorug04G0038200 Rorug04G0114000 Rorug04G0158400 Rorug05G0168700 Rorug05G0171500 Rorug05G0206300 Rorug05G0225600 Rorug05G0256100 Rorug05G0263900 Rorug05G0317700 Rorug05G0341300 Rorug05G0389400 Rorug05G0393000 Rorug05G0393000 Rorug05G0511600 Rorug05G0586200 Rorug06G0124100 Rorug06G0124200 Rorug06G0509200 Rorug07G0197400 Rorug07G0198900 Rorug07G0289300 Rorug07G0289400.1 Rorug07G0294900
rosa_samantha Rh1AG125600 Rh1BG063800 Rh1BG063900 Rh1BG151300 Rh1BG172600 Rh1CG061300 Rh1DG100800 Rh1DG122100 Rh1DG202600 Rh2AG031700 Rh2AG179100 Rh2AG215600 Rh2AG226900 Rh2AG257200 Rh2AG296600 Rh2AG420600 Rh2AG501700 Rh2AG631000 Rh2BG203000 Rh2CG062400 Rh2CG263600 Rh2CG563700 Rh2DG031200 Rh2DG320600 Rh2DG572400 Rh3CG209000 Rh3CG215500 Rh3CG234400 Rh3CG280600 Rh3CG336200 Rh3DG334900 Rh3DG339300 Rh4AG215100 Rh4AG340100 Rh4BG070800 Rh4BG096700 Rh4BG224600 Rh4BG262700 Rh4CG004600 Rh4CG196600 Rh4CG196700 Rh4CG196800 Rh4DG342500 Rh5AG066500 Rh5AG248900 Rh5AG424500 Rh5AG432600 Rh5BG115800 Rh5BG169600 Rh5CG066900 Rh5CG221400 Rh5CG227600 Rh5CG257700 Rh5CG266400 Rh5CG284700 Rh5CG319500 Rh5CG363800 Rh5CG379900 Rh5DG123900 Rh5DG367800 Rh5DG472100 Rh5DG515000 Rh5DG518000 Rh5DG548100 Rh6AG085900 Rh6AG092100 Rh6CG188200 Rh6CG190400 Rh6DG188700 Rh6DG277200 Rh6DG459400 Rh7AG010600 Rh7AG225900 Rh7AG316900 Rh7AG321000 Rh7AG483600 Rh7BG142800 Rh7DG047400 Rh7DG114300 Rh7DG143800 Rh7DG233100 Rh7DG244700 Rh7DG254300 Rh7DG327600 Rh7DG345200 Rh7DG378400
rosa_wichuraiana Rw3G012560 Rw3G022840 Rw4G003390 Rw5G027110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 308
Acc36I ACCTGC 1 cut(s) 308
AccB1I GGYRCC 1 cut(s) 1140
AccI GTMKAC 2 cut(s) 222, 662
AciI CCGC 3 cut(s) 167, 170, 506
AclWI GGATC 6 cut(s) 150, 497, 510, 917, 930, 990
AcoI YGGCCR 1 cut(s) 961
AcuI CTGAAG 4 cut(s) 20, 30, 36, 563
AcyI GRCGYC 1 cut(s) 1141
AfaI GTAC 3 cut(s) 753, 801, 909
AfiI CCNNNNNNNGG 5 cut(s) 136, 189, 720, 850, 917
AgeI ACCGGT 2 cut(s) 431, 814
AgsI TTSAA 2 cut(s) 55, 1013
AhdI GACNNNNNGTC 1 cut(s) 624
AjiI CACGTC 1 cut(s) 1021
AjnI CCWGG 5 cut(s) 87, 498, 899, 977, 1065
AluBI AGCT 9 cut(s) 14, 40, 44, 58, 178, 768, 970, 1093, 1105
AluI AGCT 9 cut(s) 14, 40, 44, 58, 178, 768, 970, 1093, 1105
Alw21I GWGCWC 2 cut(s) 200, 866
Alw26I GTCTC 3 cut(s) 75, 224, 446
Alw44I GTGCAC 1 cut(s) 862
AlwI GGATC 6 cut(s) 150, 497, 510, 917, 930, 990
AoxI GGCC 5 cut(s) 210, 277, 600, 961, 1080
ApaLI GTGCAC 1 cut(s) 862
ApeKI GCWGC 5 cut(s) 44, 250, 460, 728, 1090
AsiGI ACCGGT 2 cut(s) 431, 814
AspLEI GCGC 1 cut(s) 1143
AspS9I GGNCC 2 cut(s) 210, 489
AsuC2I CCSGG 1 cut(s) 919
AsuHPI GGTGA 4 cut(s) 37, 131, 184, 421
AsuNHI GCTAGC 1 cut(s) 40
AvaII GGWCC 1 cut(s) 489
BaeGI GKGCMC 1 cut(s) 866
BalI TGGCCA 1 cut(s) 963
BamHI GGATCC 2 cut(s) 502, 922
BanI GGYRCC 1 cut(s) 1140
BauI CACGAG 1 cut(s) 1076
BbsI GAAGAC 3 cut(s) 26, 642, 841
Bbv12I GWGCWC 2 cut(s) 200, 866
BbvI GCAGC 5 cut(s) 31, 262, 472, 715, 1102
BccI CCATC 1 cut(s) 356
BceAI ACGGC 1 cut(s) 987
BciT130I CCWGG 5 cut(s) 89, 500, 901, 979, 1067
BclI TGATCA 2 cut(s) 154, 775
BcnI CCSGG 1 cut(s) 919
BcoDI GTCTC 3 cut(s) 75, 224, 446
BfaI CTAG 6 cut(s) 41, 407, 509, 587, 765, 794
BfmI CTRYAG 2 cut(s) 248, 439
BfoI RGCGCY 1 cut(s) 1144
BfuAI ACCTGC 1 cut(s) 308
BisI GCNGC 6 cut(s) 45, 168, 251, 461, 729, 1091
BlsI GCNGC 6 cut(s) 46, 169, 252, 462, 730, 1092
Bme1390I CCNGG 6 cut(s) 89, 500, 901, 919, 979, 1067
Bme18I GGWCC 1 cut(s) 489
BmeRI GACNNNNNGTC 1 cut(s) 624
BmgBI CACGTC 1 cut(s) 1021
BmgT120I GGNCC 2 cut(s) 210, 489
BmiI GGNNCC 3 cut(s) 504, 924, 1142
BmrFI CCNGG 6 cut(s) 89, 500, 901, 919, 979, 1067
BmsI GCATC 6 cut(s) 154, 331, 379, 585, 692, 769
BmtI GCTAGC 1 cut(s) 44
BpiI GAAGAC 3 cut(s) 26, 642, 841
BpmI CTGGAG 2 cut(s) 44, 672
Bpu10I CCTNAGC 2 cut(s) 485, 493
BpuMI CCSGG 1 cut(s) 919
BsaAI YACGTR 1 cut(s) 720
BsaHI GRCGYC 1 cut(s) 1141
BsaJI CCNNGG 4 cut(s) 115, 498, 918, 978
BsaWI WCCGGW 3 cut(s) 431, 814, 843
BsaXI ACNNNNNCTCC 2 cut(s) 845, 875
Bsc4I CCNNNNNNNGG 5 cut(s) 136, 189, 720, 850, 917
Bse118I RCCGGY 2 cut(s) 431, 814
Bse1I ACTGG 3 cut(s) 256, 280, 1142
BseBI CCWGG 5 cut(s) 89, 500, 901, 979, 1067
BseDI CCNNGG 4 cut(s) 115, 498, 918, 978
BseGI GGATG 2 cut(s) 346, 760
BseLI CCNNNNNNNGG 5 cut(s) 136, 189, 720, 850, 917
BseMII CTCAG 5 cut(s) 215, 299, 441, 447, 896
BseNI ACTGG 3 cut(s) 256, 280, 1142
BseRI GAGGAG 1 cut(s) 866
BseSI GKGCMC 1 cut(s) 866
BseXI GCAGC 5 cut(s) 31, 262, 472, 715, 1102
BshFI GGCC 5 cut(s) 212, 279, 602, 963, 1082
BshNI GGYRCC 1 cut(s) 1140
BshTI ACCGGT 2 cut(s) 431, 814
BsiHKAI GWGCWC 2 cut(s) 200, 866
BsiSI CCGG 4 cut(s) 432, 815, 844, 918
BslFI GGGAC 1 cut(s) 694
BslI CCNNNNNNNGG 5 cut(s) 136, 189, 720, 850, 917
BsmAI GTCTC 3 cut(s) 75, 224, 446
BsmFI GGGAC 1 cut(s) 694
BsnI GGCC 5 cut(s) 212, 279, 602, 963, 1082
Bsp1286I GDGCHC 2 cut(s) 200, 866
Bsp143I GATC 8 cut(s) 142, 154, 301, 373, 502, 775, 922, 982
Bsp19I CCATGG 1 cut(s) 115
BspACI CCGC 3 cut(s) 167, 170, 506
BspANI GGCC 5 cut(s) 212, 279, 602, 963, 1082
BspCNI CTCAG 5 cut(s) 214, 298, 442, 448, 895
BspLI GGNNCC 3 cut(s) 504, 924, 1142
BspMAI CTGCAG 1 cut(s) 252
BspMI ACCTGC 1 cut(s) 308
BspOI GCTAGC 1 cut(s) 44
BspPI GGATC 6 cut(s) 150, 497, 510, 917, 930, 990
BspT107I GGYRCC 1 cut(s) 1140
BsrFI RCCGGY 2 cut(s) 431, 814
BsrI ACTGG 3 cut(s) 256, 280, 1142
BssAI RCCGGY 2 cut(s) 431, 814
BssECI CCNNGG 4 cut(s) 115, 498, 918, 978
BssMI GATC 8 cut(s) 142, 154, 301, 373, 502, 775, 922, 982
BssNAI GTATAC 1 cut(s) 663
BssNI GRCGYC 1 cut(s) 1141
BssSI CACGAG 1 cut(s) 1076
BssT1I CCWWGG 1 cut(s) 115
Bst1107I GTATAC 1 cut(s) 663
Bst2BI CACGAG 1 cut(s) 1076
Bst2UI CCWGG 5 cut(s) 89, 500, 901, 979, 1067
Bst4CI ACNGT 5 cut(s) 125, 626, 840, 875, 991
BstACI GRCGYC 1 cut(s) 1141
BstBAI YACGTR 1 cut(s) 720
BstC8I GCNNGC 3 cut(s) 42, 180, 600
BstDEI CTNAG 9 cut(s) 73, 201, 226, 285, 450, 456, 485, 493, 882
BstDSI CCRYGG 1 cut(s) 115
BstF5I GGATG 2 cut(s) 346, 760
BstH2I RGCGCY 1 cut(s) 1144
BstHHI GCGC 1 cut(s) 1143
BstKTI GATC 8 cut(s) 145, 157, 304, 376, 505, 778, 925, 985
BstMAI GTCTC 3 cut(s) 75, 224, 446
BstMBI GATC 8 cut(s) 142, 154, 301, 373, 502, 775, 922, 982
BstNI CCWGG 5 cut(s) 89, 500, 901, 979, 1067
BstSCI CCNGG 6 cut(s) 87, 498, 899, 917, 977, 1065
BstSFI CTRYAG 2 cut(s) 248, 439
BstSLI GKGCMC 1 cut(s) 866
BstV1I GCAGC 5 cut(s) 31, 262, 472, 715, 1102
BstV2I GAAGAC 3 cut(s) 26, 642, 841
BstX2I RGATCY 3 cut(s) 142, 502, 922
BstYI RGATCY 3 cut(s) 142, 502, 922
BstZ17I GTATAC 1 cut(s) 663
BsuRI GGCC 5 cut(s) 212, 279, 602, 963, 1082
BtgI CCRYGG 1 cut(s) 115
BtrI CACGTC 1 cut(s) 1021
BtsCI GGATG 2 cut(s) 346, 760
BtsI GCAGTG 2 cut(s) 27, 705
BtsIMutI CAGTG 2 cut(s) 27, 705
BveI ACCTGC 1 cut(s) 308
Cac8I GCNNGC 3 cut(s) 42, 180, 600
CfoI GCGC 1 cut(s) 1143
Cfr10I RCCGGY 2 cut(s) 431, 814
Cfr13I GGNCC 2 cut(s) 210, 489
CseI GACGC 1 cut(s) 452
Csp6I GTAC 3 cut(s) 752, 800, 908
CspAI ACCGGT 2 cut(s) 431, 814
CviAII CATG 7 cut(s) 116, 305, 640, 779, 821, 869, 1109
CviQI GTAC 3 cut(s) 752, 800, 908
DdeI CTNAG 9 cut(s) 73, 201, 226, 285, 450, 456, 485, 493, 882
DinI GGCGCC 1 cut(s) 1142
DpnI GATC 8 cut(s) 144, 156, 303, 375, 504, 777, 924, 984
DpnII GATC 8 cut(s) 142, 154, 301, 373, 502, 775, 922, 982
DriI GACNNNNNGTC 1 cut(s) 624
EaeI YGGCCR 1 cut(s) 961
Eam1105I GACNNNNNGTC 1 cut(s) 624
Eco130I CCWWGG 1 cut(s) 115
Eco147I AGGCCT 1 cut(s) 602
Eco47I GGWCC 1 cut(s) 489
Eco57I CTGAAG 4 cut(s) 20, 30, 36, 563
EcoO109I RGGNCCY 1 cut(s) 489
EcoRII CCWGG 5 cut(s) 87, 498, 899, 977, 1065
EcoT14I CCWWGG 1 cut(s) 115
EgeI GGCGCC 1 cut(s) 1142
EheI GGCGCC 1 cut(s) 1142
ErhI CCWWGG 1 cut(s) 115
FaeI CATG 7 cut(s) 119, 308, 643, 782, 824, 872, 1112
FaqI GGGAC 1 cut(s) 694
FatI CATG 7 cut(s) 115, 304, 639, 778, 820, 868, 1108
FbaI TGATCA 2 cut(s) 154, 775
FblI GTMKAC 2 cut(s) 222, 662
Fnu4HI GCNGC 6 cut(s) 45, 168, 251, 461, 729, 1091
FokI GGATG 2 cut(s) 353, 747
Fsp4HI GCNGC 6 cut(s) 45, 168, 251, 461, 729, 1091
FspBI CTAG 6 cut(s) 41, 407, 509, 587, 765, 794
GlaI GCGC 1 cut(s) 1142
GluI GCNGC 6 cut(s) 45, 168, 251, 461, 729, 1091
GsuI CTGGAG 2 cut(s) 44, 672
HaeII RGCGCY 1 cut(s) 1144
HaeIII GGCC 5 cut(s) 212, 279, 602, 963, 1082
HapII CCGG 4 cut(s) 432, 815, 844, 918
HgaI GACGC 1 cut(s) 452
HhaI GCGC 1 cut(s) 1143
Hin1I GRCGYC 1 cut(s) 1141
Hin1II CATG 7 cut(s) 119, 308, 643, 782, 824, 872, 1112
Hin6I GCGC 1 cut(s) 1141
HinP1I GCGC 1 cut(s) 1141
HincII GTYRAC 1 cut(s) 310
HindII GTYRAC 1 cut(s) 310
HindIII AAGCTT 1 cut(s) 176
HinfI GANTC 5 cut(s) 232, 583, 674, 747, 1024
HpaII CCGG 4 cut(s) 432, 815, 844, 918
HphI GGTGA 4 cut(s) 37, 131, 184, 421
Hpy166II GTNNAC 5 cut(s) 223, 310, 663, 864, 1018
Hpy188I TCNGA 7 cut(s) 10, 288, 365, 582, 775, 885, 999
Hpy188III TCNNGA 6 cut(s) 61, 107, 203, 407, 651, 744
Hpy8I GTNNAC 5 cut(s) 223, 310, 663, 864, 1018
Hpy99I CGWCG 1 cut(s) 831
HpyAV CCTTC 6 cut(s) 71, 394, 567, 613, 880, 921
HpyCH4III ACNGT 5 cut(s) 125, 626, 840, 875, 991
HpyCH4IV ACGT 2 cut(s) 719, 1020
HpyCH4V TGCA 9 cut(s) 250, 527, 598, 705, 760, 820, 864, 1051, 1090
HpyF3I CTNAG 9 cut(s) 73, 201, 226, 285, 450, 456, 485, 493, 882
HpySE526I ACGT 2 cut(s) 719, 1020
Hsp92I GRCGYC 1 cut(s) 1141
Hsp92II CATG 7 cut(s) 119, 308, 643, 782, 824, 872, 1112
HspAI GCGC 1 cut(s) 1141
KasI GGCGCC 1 cut(s) 1140
Ksp22I TGATCA 2 cut(s) 154, 775
Kzo9I GATC 8 cut(s) 142, 154, 301, 373, 502, 775, 922, 982
LmnI GCTCC 1 cut(s) 63
Lsp1109I GCAGC 5 cut(s) 31, 262, 472, 715, 1102
LweI GCATC 6 cut(s) 154, 331, 379, 585, 692, 769
MaeI CTAG 6 cut(s) 41, 407, 509, 587, 765, 794
MaeII ACGT 2 cut(s) 719, 1020
MaeIII GTNAC 3 cut(s) 119, 258, 1029
MalI GATC 8 cut(s) 144, 156, 303, 375, 504, 777, 924, 984
MboI GATC 8 cut(s) 142, 154, 301, 373, 502, 775, 922, 982
MboII GAAGA 3 cut(s) 26, 647, 846
MflI RGATCY 3 cut(s) 142, 502, 922
MhlI GDGCHC 2 cut(s) 200, 866
MlsI TGGCCA 1 cut(s) 963
MluCI AATT 2 cut(s) 134, 948
MluNI TGGCCA 1 cut(s) 963
Mly113I GGCGCC 1 cut(s) 1141
MlyI GAGTC 2 cut(s) 226, 756
Mox20I TGGCCA 1 cut(s) 963
MscI TGGCCA 1 cut(s) 963
MseI TTAA 4 cut(s) 266, 537, 951, 1115
Msp20I TGGCCA 1 cut(s) 963
MspI CCGG 4 cut(s) 432, 815, 844, 918
MspR9I CCNGG 6 cut(s) 89, 500, 901, 919, 979, 1067
MvaI CCWGG 5 cut(s) 89, 500, 901, 979, 1067
NarI GGCGCC 1 cut(s) 1141
NciI CCSGG 1 cut(s) 919
NcoI CCATGG 1 cut(s) 115
NdeII GATC 8 cut(s) 142, 154, 301, 373, 502, 775, 922, 982
NheI GCTAGC 1 cut(s) 40
NlaIII CATG 7 cut(s) 119, 308, 643, 782, 824, 872, 1112
NlaIV GGNNCC 3 cut(s) 504, 924, 1142
NmuCI GTSAC 3 cut(s) 119, 258, 1029
PaqCI CACCTGC 1 cut(s) 308
PceI AGGCCT 1 cut(s) 602
PfeI GAWTC 3 cut(s) 583, 674, 1024
PflFI GACNNNGTC 1 cut(s) 218
PinAI ACCGGT 2 cut(s) 431, 814
PkrI GCNGC 6 cut(s) 46, 169, 252, 462, 730, 1092
PleI GAGTC 2 cut(s) 226, 755
PluTI GGCGCC 1 cut(s) 1144
PpsI GAGTC 2 cut(s) 226, 755
Ppu21I YACGTR 1 cut(s) 720
PpuMI RGGWCCY 1 cut(s) 489
Psp5II RGGWCCY 1 cut(s) 489
Psp6I CCWGG 5 cut(s) 87, 498, 899, 977, 1065
PspGI CCWGG 5 cut(s) 87, 498, 899, 977, 1065
PspN4I GGNNCC 3 cut(s) 504, 924, 1142
PspPI GGNCC 2 cut(s) 210, 489
PspPPI RGGWCCY 1 cut(s) 489
PsrI GAACNNNNNNTAC 2 cut(s) 792, 824
PstI CTGCAG 1 cut(s) 252
PsuI RGATCY 3 cut(s) 142, 502, 922
PsyI GACNNNGTC 1 cut(s) 218
RsaI GTAC 3 cut(s) 753, 801, 909
RsaNI GTAC 3 cut(s) 752, 800, 908
SaqAI TTAA 4 cut(s) 266, 537, 951, 1115
SatI GCNGC 6 cut(s) 45, 168, 251, 461, 729, 1091
Sau3AI GATC 8 cut(s) 142, 154, 301, 373, 502, 775, 922, 982
Sau96I GGNCC 2 cut(s) 210, 489
SchI GAGTC 2 cut(s) 226, 756
ScrFI CCNGG 6 cut(s) 89, 500, 901, 919, 979, 1067
SduI GDGCHC 2 cut(s) 200, 866
SfaNI GCATC 6 cut(s) 154, 331, 379, 585, 692, 769
SfcI CTRYAG 2 cut(s) 248, 439
SfoI GGCGCC 1 cut(s) 1142
SgrAI CRCCGGYG 1 cut(s) 814
SinI GGWCC 1 cut(s) 489
Sse9I AATT 2 cut(s) 134, 948
SseBI AGGCCT 1 cut(s) 602
SsiI CCGC 3 cut(s) 167, 170, 506
SspDI GGCGCC 1 cut(s) 1140
SspMI CTAG 6 cut(s) 41, 407, 509, 587, 765, 794
StuI AGGCCT 1 cut(s) 602
StyD4I CCNGG 6 cut(s) 87, 498, 899, 917, 977, 1065
StyI CCWWGG 1 cut(s) 115
TaaI ACNGT 5 cut(s) 125, 626, 840, 875, 991
TaiI ACGT 2 cut(s) 722, 1023
TaqI TCGA 4 cut(s) 272, 300, 743, 943
TaqII GACCGA 1 cut(s) 1017
TasI AATT 2 cut(s) 134, 948
TauI GCSGC 1 cut(s) 170
TfiI GAWTC 3 cut(s) 583, 674, 1024
Tru1I TTAA 4 cut(s) 266, 537, 951, 1115
Tru9I TTAA 4 cut(s) 266, 537, 951, 1115
TscAI CASTG 2 cut(s) 27, 712
TseFI GTSAC 3 cut(s) 119, 258, 1029
TseI GCWGC 5 cut(s) 44, 250, 460, 728, 1090
Tsp45I GTSAC 3 cut(s) 119, 258, 1029
TspDTI ATGAA 4 cut(s) 17, 373, 413, 1143
TspGWI ACGGA 2 cut(s) 596, 844
TspRI CASTG 2 cut(s) 27, 712
Tth111I GACNNNGTC 1 cut(s) 218
VneI GTGCAC 1 cut(s) 862
VpaK11BI GGWCC 1 cut(s) 489
XbaI TCTAGA 1 cut(s) 406
XmiI GTMKAC 2 cut(s) 222, 662
XspI CTAG 6 cut(s) 41, 407, 509, 587, 765, 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.