ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 341 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 181, 293 |
| AgsI | TTSAA | 2 cut(s) | 191, 404 |
| AluBI | AGCT | 2 cut(s) | 68, 209 |
| AluI | AGCT | 2 cut(s) | 68, 209 |
| Alw21I | GWGCWC | 1 cut(s) | 211 |
| Alw26I | GTCTC | 1 cut(s) | 38 |
| AoxI | GGCC | 1 cut(s) | 279 |
| ApeKI | GCWGC | 2 cut(s) | 30, 65 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 110, 142 |
| AspLEI | GCGC | 1 cut(s) | 429 |
| AspS9I | GGNCC | 1 cut(s) | 280 |
| AsuHPI | GGTGA | 2 cut(s) | 226, 368 |
| AsuII | TTCGAA | 1 cut(s) | 394 |
| BanII | GRGCYC | 1 cut(s) | 211 |
| Bbv12I | GWGCWC | 1 cut(s) | 211 |
| BbvI | GCAGC | 2 cut(s) | 17, 77 |
| BclI | TGATCA | 2 cut(s) | 256, 373 |
| BcoDI | GTCTC | 1 cut(s) | 38 |
| BfaI | CTAG | 1 cut(s) | 246 |
| BfmI | CTRYAG | 1 cut(s) | 305 |
| BisI | GCNGC | 2 cut(s) | 31, 66 |
| BlsI | GCNGC | 2 cut(s) | 32, 67 |
| BmgT120I | GGNCC | 1 cut(s) | 280 |
| BmiI | GGNNCC | 1 cut(s) | 282 |
| Bpu14I | TTCGAA | 1 cut(s) | 394 |
| Bsa29I | ATCGAT | 1 cut(s) | 157 |
| BsaBI | GATNNNNATC | 1 cut(s) | 108 |
| BsaJI | CCNNGG | 1 cut(s) | 75 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 181, 293 |
| Bse1I | ACTGG | 2 cut(s) | 17, 298 |
| Bse3DI | GCAATG | 1 cut(s) | 346 |
| Bse8I | GATNNNNATC | 1 cut(s) | 108 |
| BseCI | ATCGAT | 1 cut(s) | 157 |
| BseDI | CCNNGG | 1 cut(s) | 75 |
| BseJI | GATNNNNATC | 1 cut(s) | 108 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 181, 293 |
| BseMI | GCAATG | 1 cut(s) | 346 |
| BseMII | CTCAG | 1 cut(s) | 357 |
| BseNI | ACTGG | 2 cut(s) | 17, 298 |
| BseRI | GAGGAG | 2 cut(s) | 52, 430 |
| BseXI | GCAGC | 2 cut(s) | 17, 77 |
| BshFI | GGCC | 1 cut(s) | 281 |
| BshVI | ATCGAT | 1 cut(s) | 157 |
| BsiHKAI | GWGCWC | 1 cut(s) | 211 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 181, 293 |
| BsmAI | GTCTC | 1 cut(s) | 38 |
| BsnI | GGCC | 1 cut(s) | 281 |
| Bsp119I | TTCGAA | 1 cut(s) | 394 |
| Bsp1286I | GDGCHC | 1 cut(s) | 211 |
| Bsp143I | GATC | 5 cut(s) | 109, 178, 256, 324, 373 |
| Bsp19I | CCATGG | 1 cut(s) | 75 |
| BspANI | GGCC | 1 cut(s) | 281 |
| BspCNI | CTCAG | 1 cut(s) | 358 |
| BspDI | ATCGAT | 1 cut(s) | 157 |
| BspLI | GGNNCC | 1 cut(s) | 282 |
| BspT104I | TTCGAA | 1 cut(s) | 394 |
| BsrDI | GCAATG | 1 cut(s) | 346 |
| BsrI | ACTGG | 2 cut(s) | 17, 298 |
| BssECI | CCNNGG | 1 cut(s) | 75 |
| BssMI | GATC | 5 cut(s) | 109, 178, 256, 324, 373 |
| BssT1I | CCWWGG | 1 cut(s) | 75 |
| Bst4CI | ACNGT | 2 cut(s) | 201, 492 |
| Bst6I | CTCTTC | 2 cut(s) | 273, 347 |
| BstBI | TTCGAA | 1 cut(s) | 394 |
| BstDEI | CTNAG | 1 cut(s) | 366 |
| BstDSI | CCRYGG | 1 cut(s) | 75 |
| BstHHI | GCGC | 1 cut(s) | 429 |
| BstKTI | GATC | 5 cut(s) | 112, 181, 259, 327, 376 |
| BstMAI | GTCTC | 1 cut(s) | 38 |
| BstMBI | GATC | 5 cut(s) | 109, 178, 256, 324, 373 |
| BstSFI | CTRYAG | 1 cut(s) | 305 |
| BstV1I | GCAGC | 2 cut(s) | 17, 77 |
| Bsu15I | ATCGAT | 1 cut(s) | 157 |
| BsuRI | GGCC | 1 cut(s) | 281 |
| BsuTUI | ATCGAT | 1 cut(s) | 157 |
| BtgI | CCRYGG | 1 cut(s) | 75 |
| BtsIMutI | CAGTG | 1 cut(s) | 206 |
| CfoI | GCGC | 1 cut(s) | 429 |
| Cfr13I | GGNCC | 1 cut(s) | 280 |
| ClaI | ATCGAT | 1 cut(s) | 157 |
| CviAII | CATG | 2 cut(s) | 76, 277 |
| CviJI | RGCY | 7 cut(s) | 68, 80, 101, 209, 281, 386, 497 |
| CviKI_1 | RGCY | 7 cut(s) | 68, 80, 101, 209, 281, 386, 497 |
| DdeI | CTNAG | 1 cut(s) | 366 |
| DpnI | GATC | 5 cut(s) | 111, 180, 258, 326, 375 |
| DpnII | GATC | 5 cut(s) | 109, 178, 256, 324, 373 |
| Eam1104I | CTCTTC | 2 cut(s) | 273, 347 |
| EarI | CTCTTC | 2 cut(s) | 273, 347 |
| Ecl136II | GAGCTC | 1 cut(s) | 209 |
| Eco130I | CCWWGG | 1 cut(s) | 75 |
| Eco24I | GRGCYC | 1 cut(s) | 211 |
| Eco53kI | GAGCTC | 1 cut(s) | 209 |
| Eco57I | CTGAAG | 1 cut(s) | 341 |
| EcoICRI | GAGCTC | 1 cut(s) | 209 |
| EcoT14I | CCWWGG | 1 cut(s) | 75 |
| EcoT38I | GRGCYC | 1 cut(s) | 211 |
| ErhI | CCWWGG | 1 cut(s) | 75 |
| FaeI | CATG | 2 cut(s) | 79, 280 |
| FatI | CATG | 2 cut(s) | 75, 276 |
| FbaI | TGATCA | 2 cut(s) | 256, 373 |
| Fnu4HI | GCNGC | 2 cut(s) | 31, 66 |
| FriOI | GRGCYC | 1 cut(s) | 211 |
| Fsp4HI | GCNGC | 2 cut(s) | 31, 66 |
| FspBI | CTAG | 1 cut(s) | 246 |
| GlaI | GCGC | 1 cut(s) | 428 |
| GluI | GCNGC | 2 cut(s) | 31, 66 |
| HaeIII | GGCC | 1 cut(s) | 281 |
| HhaI | GCGC | 1 cut(s) | 429 |
| Hin1II | CATG | 2 cut(s) | 79, 280 |
| Hin6I | GCGC | 1 cut(s) | 427 |
| HinP1I | GCGC | 1 cut(s) | 427 |
| HincII | GTYRAC | 1 cut(s) | 488 |
| HindII | GTYRAC | 1 cut(s) | 488 |
| HinfI | GANTC | 4 cut(s) | 141, 228, 251, 396 |
| HphI | GGTGA | 2 cut(s) | 226, 368 |
| Hpy166II | GTNNAC | 1 cut(s) | 488 |
| Hpy188I | TCNGA | 2 cut(s) | 256, 445 |
| Hpy188III | TCNNGA | 3 cut(s) | 116, 328, 404 |
| Hpy8I | GTNNAC | 1 cut(s) | 488 |
| HpyCH4III | ACNGT | 2 cut(s) | 201, 492 |
| HpyF3I | CTNAG | 1 cut(s) | 366 |
| Hsp92II | CATG | 2 cut(s) | 79, 280 |
| HspAI | GCGC | 1 cut(s) | 427 |
| Ksp22I | TGATCA | 2 cut(s) | 256, 373 |
| Kzo9I | GATC | 5 cut(s) | 109, 178, 256, 324, 373 |
| LpnPI | CCDG | 2 cut(s) | 279, 321 |
| Lsp1109I | GCAGC | 2 cut(s) | 17, 77 |
| MaeI | CTAG | 1 cut(s) | 246 |
| MalI | GATC | 5 cut(s) | 111, 180, 258, 326, 375 |
| MboI | GATC | 5 cut(s) | 109, 178, 256, 324, 373 |
| MboII | GAAGA | 5 cut(s) | 102, 104, 260, 334, 364 |
| MhlI | GDGCHC | 1 cut(s) | 211 |
| MlyI | GAGTC | 2 cut(s) | 237, 260 |
| MnlI | CCTC | 8 cut(s) | 30, 33, 248, 276, 294, 348, 448, 451 |
| MseI | TTAA | 1 cut(s) | 413 |
| NcoI | CCATGG | 1 cut(s) | 75 |
| NdeII | GATC | 5 cut(s) | 109, 178, 256, 324, 373 |
| NlaIII | CATG | 2 cut(s) | 79, 280 |
| NlaIV | GGNNCC | 1 cut(s) | 282 |
| NspV | TTCGAA | 1 cut(s) | 394 |
| PfeI | GAWTC | 2 cut(s) | 141, 396 |
| PkrI | GCNGC | 2 cut(s) | 32, 67 |
| PleI | GAGTC | 2 cut(s) | 236, 259 |
| PpsI | GAGTC | 2 cut(s) | 236, 259 |
| Psp124BI | GAGCTC | 1 cut(s) | 211 |
| PspN4I | GGNNCC | 1 cut(s) | 282 |
| PspPI | GGNCC | 1 cut(s) | 280 |
| SacI | GAGCTC | 1 cut(s) | 211 |
| SaqAI | TTAA | 1 cut(s) | 413 |
| SatI | GCNGC | 2 cut(s) | 31, 66 |
| Sau3AI | GATC | 5 cut(s) | 109, 178, 256, 324, 373 |
| Sau96I | GGNCC | 1 cut(s) | 280 |
| SchI | GAGTC | 2 cut(s) | 237, 260 |
| SduI | GDGCHC | 1 cut(s) | 211 |
| SetI | ASST | 4 cut(s) | 70, 136, 211, 423 |
| SfcI | CTRYAG | 1 cut(s) | 305 |
| SfuI | TTCGAA | 1 cut(s) | 394 |
| SspMI | CTAG | 1 cut(s) | 246 |
| SstI | GAGCTC | 1 cut(s) | 211 |
| StyI | CCWWGG | 1 cut(s) | 75 |
| TaaI | ACNGT | 2 cut(s) | 201, 492 |
| TaqI | TCGA | 3 cut(s) | 139, 157, 394 |
| TfiI | GAWTC | 2 cut(s) | 141, 396 |
| Tru1I | TTAA | 1 cut(s) | 413 |
| Tru9I | TTAA | 1 cut(s) | 413 |
| TscAI | CASTG | 1 cut(s) | 206 |
| TseI | GCWGC | 2 cut(s) | 30, 65 |
| TspDTI | ATGAA | 1 cut(s) | 365 |
| TspRI | CASTG | 1 cut(s) | 206 |
| XspI | CTAG | 1 cut(s) | 246 |