ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 500 |
| AccI | GTMKAC | 1 cut(s) | 466 |
| AciI | CCGC | 1 cut(s) | 242 |
| AfaI | GTAC | 2 cut(s) | 543, 707 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 222, 408, 602, 641 |
| AflIII | ACRYGT | 1 cut(s) | 820 |
| AgsI | TTSAA | 2 cut(s) | 53, 169 |
| AjnI | CCWGG | 1 cut(s) | 362 |
| AluBI | AGCT | 4 cut(s) | 160, 661, 739, 760 |
| AluI | AGCT | 4 cut(s) | 160, 661, 739, 760 |
| AoxI | GGCC | 2 cut(s) | 213, 632 |
| ApeKI | GCWGC | 2 cut(s) | 4, 739 |
| AspLEI | GCGC | 1 cut(s) | 127 |
| AspS9I | GGNCC | 3 cut(s) | 214, 366, 632 |
| AsuHPI | GGTGA | 1 cut(s) | 252 |
| AvaII | GGWCC | 1 cut(s) | 366 |
| BaeGI | GKGCMC | 1 cut(s) | 689 |
| BanII | GRGCYC | 1 cut(s) | 67 |
| BbvI | GCAGC | 1 cut(s) | 726 |
| BciT130I | CCWGG | 1 cut(s) | 364 |
| BfaI | CTAG | 5 cut(s) | 20, 110, 122, 527, 791 |
| BisI | GCNGC | 2 cut(s) | 5, 740 |
| BlsI | GCNGC | 2 cut(s) | 6, 741 |
| Bme1390I | CCNGG | 1 cut(s) | 364 |
| Bme18I | GGWCC | 1 cut(s) | 366 |
| BmgT120I | GGNCC | 3 cut(s) | 214, 366, 632 |
| BmiI | GGNNCC | 1 cut(s) | 368 |
| BmrFI | CCNGG | 1 cut(s) | 364 |
| BpmI | CTGGAG | 1 cut(s) | 480 |
| BsaJI | CCNNGG | 1 cut(s) | 407 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 222, 408, 602, 641 |
| Bse1I | ACTGG | 2 cut(s) | 325, 646 |
| Bse3DI | GCAATG | 1 cut(s) | 707 |
| BseBI | CCWGG | 1 cut(s) | 364 |
| BseDI | CCNNGG | 1 cut(s) | 407 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 222, 408, 602, 641 |
| BseMI | GCAATG | 1 cut(s) | 707 |
| BseNI | ACTGG | 2 cut(s) | 325, 646 |
| BseRI | GAGGAG | 1 cut(s) | 818 |
| BseSI | GKGCMC | 1 cut(s) | 689 |
| BseXI | GCAGC | 1 cut(s) | 726 |
| BshFI | GGCC | 2 cut(s) | 215, 634 |
| BslFI | GGGAC | 2 cut(s) | 352, 437 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 222, 408, 602, 641 |
| BsmFI | GGGAC | 2 cut(s) | 352, 437 |
| BsmI | GAATGC | 1 cut(s) | 584 |
| BsnI | GGCC | 2 cut(s) | 215, 634 |
| Bsp1286I | GDGCHC | 2 cut(s) | 67, 689 |
| BspACI | CCGC | 1 cut(s) | 242 |
| BspANI | GGCC | 2 cut(s) | 215, 634 |
| BspLI | GGNNCC | 1 cut(s) | 368 |
| BsrDI | GCAATG | 1 cut(s) | 707 |
| BsrI | ACTGG | 2 cut(s) | 325, 646 |
| BssECI | CCNNGG | 1 cut(s) | 407 |
| BssT1I | CCWWGG | 1 cut(s) | 407 |
| Bst2UI | CCWGG | 1 cut(s) | 364 |
| Bst4CI | ACNGT | 1 cut(s) | 518 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 814 |
| BstC8I | GCNNGC | 4 cut(s) | 84, 158, 384, 584 |
| BstEII | GGTNACC | 1 cut(s) | 258 |
| BstHHI | GCGC | 1 cut(s) | 127 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 133, 299, 814 |
| BstNI | CCWGG | 1 cut(s) | 364 |
| BstNSI | RCATGY | 2 cut(s) | 86, 824 |
| BstPI | GGTNACC | 1 cut(s) | 258 |
| BstSCI | CCNGG | 1 cut(s) | 362 |
| BstSLI | GKGCMC | 1 cut(s) | 689 |
| BstV1I | GCAGC | 1 cut(s) | 726 |
| BsuRI | GGCC | 2 cut(s) | 215, 634 |
| BtsIMutI | CAGTG | 1 cut(s) | 639 |
| Cac8I | GCNNGC | 4 cut(s) | 84, 158, 384, 584 |
| CfoI | GCGC | 1 cut(s) | 127 |
| Cfr13I | GGNCC | 3 cut(s) | 214, 366, 632 |
| CsiI | ACCWGGT | 1 cut(s) | 362 |
| Csp6I | GTAC | 2 cut(s) | 542, 706 |
| CviAII | CATG | 8 cut(s) | 83, 191, 239, 558, 587, 697, 772, 821 |
| CviQI | GTAC | 2 cut(s) | 542, 706 |
| Eco130I | CCWWGG | 1 cut(s) | 407 |
| Eco24I | GRGCYC | 1 cut(s) | 67 |
| Eco47I | GGWCC | 1 cut(s) | 366 |
| Eco91I | GGTNACC | 1 cut(s) | 258 |
| EcoO109I | RGGNCCY | 1 cut(s) | 632 |
| EcoO65I | GGTNACC | 1 cut(s) | 258 |
| EcoRII | CCWGG | 1 cut(s) | 362 |
| EcoT14I | CCWWGG | 1 cut(s) | 407 |
| EcoT38I | GRGCYC | 1 cut(s) | 67 |
| ErhI | CCWWGG | 1 cut(s) | 407 |
| FaeI | CATG | 8 cut(s) | 86, 194, 242, 561, 590, 700, 775, 824 |
| FaqI | GGGAC | 2 cut(s) | 352, 437 |
| FatI | CATG | 8 cut(s) | 82, 190, 238, 557, 586, 696, 771, 820 |
| FauNDI | CATATG | 1 cut(s) | 221 |
| FblI | GTMKAC | 1 cut(s) | 466 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 740 |
| FriOI | GRGCYC | 1 cut(s) | 67 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 740 |
| FspBI | CTAG | 5 cut(s) | 20, 110, 122, 527, 791 |
| GlaI | GCGC | 1 cut(s) | 126 |
| GluI | GCNGC | 2 cut(s) | 5, 740 |
| GsuI | CTGGAG | 1 cut(s) | 480 |
| HaeIII | GGCC | 2 cut(s) | 215, 634 |
| HhaI | GCGC | 1 cut(s) | 127 |
| Hin1II | CATG | 8 cut(s) | 86, 194, 242, 561, 590, 700, 775, 824 |
| Hin6I | GCGC | 1 cut(s) | 125 |
| HinP1I | GCGC | 1 cut(s) | 125 |
| HindIII | AAGCTT | 1 cut(s) | 158 |
| HinfI | GANTC | 3 cut(s) | 53, 151, 165 |
| HphI | GGTGA | 1 cut(s) | 252 |
| Hpy166II | GTNNAC | 3 cut(s) | 46, 92, 467 |
| Hpy188I | TCNGA | 1 cut(s) | 715 |
| Hpy188III | TCNNGA | 3 cut(s) | 459, 527, 752 |
| Hpy8I | GTNNAC | 3 cut(s) | 46, 92, 467 |
| HpyAV | CCTTC | 1 cut(s) | 645 |
| HpyCH4III | ACNGT | 1 cut(s) | 518 |
| HpyCH4IV | ACGT | 1 cut(s) | 196 |
| HpyCH4V | TGCA | 4 cut(s) | 7, 82, 655, 700 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 133, 299, 814 |
| HpySE526I | ACGT | 1 cut(s) | 196 |
| Hsp92II | CATG | 8 cut(s) | 86, 194, 242, 561, 590, 700, 775, 824 |
| HspAI | GCGC | 1 cut(s) | 125 |
| LmnI | GCTCC | 2 cut(s) | 561, 805 |
| Lsp1109I | GCAGC | 1 cut(s) | 726 |
| MabI | ACCWGGT | 1 cut(s) | 362 |
| MaeI | CTAG | 5 cut(s) | 20, 110, 122, 527, 791 |
| MaeII | ACGT | 1 cut(s) | 196 |
| MaeIII | GTNAC | 4 cut(s) | 182, 258, 478, 548 |
| MboII | GAAGA | 1 cut(s) | 97 |
| MhlI | GDGCHC | 2 cut(s) | 67, 689 |
| MluCI | AATT | 3 cut(s) | 28, 69, 837 |
| MlyI | GAGTC | 1 cut(s) | 145 |
| MnlI | CCTC | 6 cut(s) | 227, 380, 455, 568, 779, 796 |
| MseI | TTAA | 2 cut(s) | 429, 847 |
| MslI | CAYNNNNRTG | 3 cut(s) | 195, 273, 307 |
| MspA1I | CMGCKG | 1 cut(s) | 661 |
| MspR9I | CCNGG | 1 cut(s) | 364 |
| Mva1269I | GAATGC | 1 cut(s) | 584 |
| MvaI | CCWGG | 1 cut(s) | 364 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 133, 299, 814 |
| NdeI | CATATG | 1 cut(s) | 221 |
| NlaIII | CATG | 8 cut(s) | 86, 194, 242, 561, 590, 700, 775, 824 |
| NlaIV | GGNNCC | 1 cut(s) | 368 |
| NmuCI | GTSAC | 2 cut(s) | 258, 548 |
| NspI | RCATGY | 2 cut(s) | 86, 824 |
| PaeI | GCATGC | 1 cut(s) | 86 |
| PciI | ACATGT | 1 cut(s) | 820 |
| PctI | GAATGC | 1 cut(s) | 584 |
| PfeI | GAWTC | 2 cut(s) | 53, 165 |
| PkrI | GCNGC | 2 cut(s) | 6, 741 |
| PleI | GAGTC | 1 cut(s) | 145 |
| PpsI | GAGTC | 1 cut(s) | 145 |
| PscI | ACATGT | 1 cut(s) | 820 |
| PsiI | TTATAA | 1 cut(s) | 500 |
| Psp6I | CCWGG | 1 cut(s) | 362 |
| PspEI | GGTNACC | 1 cut(s) | 258 |
| PspGI | CCWGG | 1 cut(s) | 362 |
| PspN4I | GGNNCC | 1 cut(s) | 368 |
| PspPI | GGNCC | 3 cut(s) | 214, 366, 632 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 186, 218 |
| PvuII | CAGCTG | 1 cut(s) | 661 |
| RsaI | GTAC | 2 cut(s) | 543, 707 |
| RsaNI | GTAC | 2 cut(s) | 542, 706 |
| RseI | CAYNNNNRTG | 3 cut(s) | 195, 273, 307 |
| SaqAI | TTAA | 2 cut(s) | 429, 847 |
| SatI | GCNGC | 2 cut(s) | 5, 740 |
| Sau96I | GGNCC | 3 cut(s) | 214, 366, 632 |
| SchI | GAGTC | 1 cut(s) | 145 |
| ScrFI | CCNGG | 1 cut(s) | 364 |
| SduI | GDGCHC | 2 cut(s) | 67, 689 |
| SexAI | ACCWGGT | 1 cut(s) | 362 |
| SinI | GGWCC | 1 cut(s) | 366 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 195, 273, 307 |
| SphI | GCATGC | 1 cut(s) | 86 |
| Sse9I | AATT | 3 cut(s) | 28, 69, 837 |
| SsiI | CCGC | 1 cut(s) | 242 |
| SspI | AATATT | 1 cut(s) | 610 |
| SspMI | CTAG | 5 cut(s) | 20, 110, 122, 527, 791 |
| StyD4I | CCNGG | 1 cut(s) | 362 |
| StyI | CCWWGG | 1 cut(s) | 407 |
| TaaI | ACNGT | 1 cut(s) | 518 |
| TaiI | ACGT | 1 cut(s) | 199 |
| TaqII | GACCGA | 1 cut(s) | 246 |
| TasI | AATT | 3 cut(s) | 28, 69, 837 |
| TfiI | GAWTC | 2 cut(s) | 53, 165 |
| Tru1I | TTAA | 2 cut(s) | 429, 847 |
| Tru9I | TTAA | 2 cut(s) | 429, 847 |
| TscAI | CASTG | 1 cut(s) | 646 |
| TseFI | GTSAC | 2 cut(s) | 258, 548 |
| TseI | GCWGC | 2 cut(s) | 4, 739 |
| Tsp45I | GTSAC | 2 cut(s) | 258, 548 |
| TspDTI | ATGAA | 2 cut(s) | 207, 603 |
| TspRI | CASTG | 1 cut(s) | 646 |
| VpaK11BI | GGWCC | 1 cut(s) | 366 |
| XbaI | TCTAGA | 1 cut(s) | 526 |
| XceI | RCATGY | 2 cut(s) | 86, 824 |
| XmiI | GTMKAC | 1 cut(s) | 466 |
| XspI | CTAG | 5 cut(s) | 20, 110, 122, 527, 791 |