ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 670 |
| AciI | CCGC | 2 cut(s) | 710, 757 |
| AcsI | RAATTY | 1 cut(s) | 835 |
| AcvI | CACGTG | 1 cut(s) | 417 |
| AcyI | GRCGYC | 1 cut(s) | 238 |
| AfaI | GTAC | 3 cut(s) | 29, 40, 794 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 87, 223, 670 |
| AgsI | TTSAA | 1 cut(s) | 605 |
| AluBI | AGCT | 3 cut(s) | 10, 479, 853 |
| AluI | AGCT | 3 cut(s) | 10, 479, 853 |
| Alw26I | GTCTC | 5 cut(s) | 205, 321, 583, 688, 807 |
| AoxI | GGCC | 3 cut(s) | 78, 404, 562 |
| ApeKI | GCWGC | 2 cut(s) | 473, 476 |
| ApoI | RAATTY | 1 cut(s) | 835 |
| AseI | ATTAAT | 2 cut(s) | 300, 369 |
| AspLEI | GCGC | 1 cut(s) | 54 |
| AspS9I | GGNCC | 1 cut(s) | 404 |
| AsuHPI | GGTGA | 1 cut(s) | 647 |
| BauI | CACGAG | 1 cut(s) | 497 |
| BbrPI | CACGTG | 1 cut(s) | 417 |
| BbvI | GCAGC | 2 cut(s) | 485, 488 |
| BccI | CCATC | 2 cut(s) | 152, 340 |
| BclI | TGATCA | 1 cut(s) | 526 |
| BcoDI | GTCTC | 5 cut(s) | 205, 321, 583, 688, 807 |
| BfaI | CTAG | 2 cut(s) | 489, 522 |
| BfmI | CTRYAG | 1 cut(s) | 383 |
| BisI | GCNGC | 2 cut(s) | 474, 477 |
| BlsI | GCNGC | 2 cut(s) | 475, 478 |
| BmgT120I | GGNCC | 1 cut(s) | 404 |
| BmiI | GGNNCC | 1 cut(s) | 405 |
| BmsI | GCATC | 1 cut(s) | 109 |
| BpuEI | CTTGAG | 1 cut(s) | 758 |
| BsaAI | YACGTR | 1 cut(s) | 417 |
| BsaHI | GRCGYC | 1 cut(s) | 238 |
| BsaJI | CCNNGG | 1 cut(s) | 569 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 412, 442 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 87, 223, 670 |
| Bse1I | ACTGG | 1 cut(s) | 731 |
| Bse3DI | GCAATG | 1 cut(s) | 430 |
| BseDI | CCNNGG | 1 cut(s) | 569 |
| BseGI | GGATG | 2 cut(s) | 517, 679 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 87, 223, 670 |
| BseMI | GCAATG | 1 cut(s) | 430 |
| BseNI | ACTGG | 1 cut(s) | 731 |
| BseRI | GAGGAG | 1 cut(s) | 84 |
| BseXI | GCAGC | 2 cut(s) | 485, 488 |
| BshFI | GGCC | 3 cut(s) | 80, 406, 564 |
| BsiSI | CCGG | 1 cut(s) | 235 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 87, 223, 670 |
| BsmAI | GTCTC | 5 cut(s) | 205, 321, 583, 688, 807 |
| BsmBI | CGTCTC | 2 cut(s) | 583, 807 |
| BsnI | GGCC | 3 cut(s) | 80, 406, 564 |
| Bsp1407I | TGTACA | 1 cut(s) | 38 |
| Bsp143I | GATC | 2 cut(s) | 526, 820 |
| BspACI | CCGC | 2 cut(s) | 710, 757 |
| BspANI | GGCC | 3 cut(s) | 80, 406, 564 |
| BspLI | GGNNCC | 1 cut(s) | 405 |
| BsrDI | GCAATG | 1 cut(s) | 430 |
| BsrGI | TGTACA | 1 cut(s) | 38 |
| BsrI | ACTGG | 1 cut(s) | 731 |
| BssECI | CCNNGG | 1 cut(s) | 569 |
| BssMI | GATC | 2 cut(s) | 526, 820 |
| BssNI | GRCGYC | 1 cut(s) | 238 |
| BssSI | CACGAG | 1 cut(s) | 497 |
| BssT1I | CCWWGG | 1 cut(s) | 569 |
| Bst2BI | CACGAG | 1 cut(s) | 497 |
| Bst4CI | ACNGT | 2 cut(s) | 43, 792 |
| BstACI | GRCGYC | 1 cut(s) | 238 |
| BstAUI | TGTACA | 1 cut(s) | 38 |
| BstBAI | YACGTR | 1 cut(s) | 417 |
| BstC8I | GCNNGC | 2 cut(s) | 481, 562 |
| BstF5I | GGATG | 2 cut(s) | 517, 679 |
| BstHHI | GCGC | 1 cut(s) | 54 |
| BstKTI | GATC | 2 cut(s) | 529, 823 |
| BstMAI | GTCTC | 5 cut(s) | 205, 321, 583, 688, 807 |
| BstMBI | GATC | 2 cut(s) | 526, 820 |
| BstSFI | CTRYAG | 1 cut(s) | 383 |
| BstV1I | GCAGC | 2 cut(s) | 485, 488 |
| BsuRI | GGCC | 3 cut(s) | 80, 406, 564 |
| BtsCI | GGATG | 2 cut(s) | 517, 679 |
| BtsIMutI | CAGTG | 1 cut(s) | 724 |
| Cac8I | GCNNGC | 2 cut(s) | 481, 562 |
| CfoI | GCGC | 1 cut(s) | 54 |
| Cfr13I | GGNCC | 1 cut(s) | 404 |
| CseI | GACGC | 1 cut(s) | 227 |
| Csp6I | GTAC | 3 cut(s) | 28, 39, 793 |
| CviAII | CATG | 5 cut(s) | 222, 260, 267, 437, 749 |
| CviQI | GTAC | 3 cut(s) | 28, 39, 793 |
| DpnI | GATC | 2 cut(s) | 528, 822 |
| DpnII | GATC | 2 cut(s) | 526, 820 |
| Eco130I | CCWWGG | 1 cut(s) | 569 |
| Eco72I | CACGTG | 1 cut(s) | 417 |
| EcoT14I | CCWWGG | 1 cut(s) | 569 |
| ErhI | CCWWGG | 1 cut(s) | 569 |
| Esp3I | CGTCTC | 2 cut(s) | 583, 807 |
| FaeI | CATG | 5 cut(s) | 225, 263, 270, 440, 752 |
| FatI | CATG | 5 cut(s) | 221, 259, 266, 436, 748 |
| FauI | CCCGC | 1 cut(s) | 764 |
| FauNDI | CATATG | 1 cut(s) | 507 |
| FbaI | TGATCA | 1 cut(s) | 526 |
| Fnu4HI | GCNGC | 2 cut(s) | 474, 477 |
| FokI | GGATG | 2 cut(s) | 524, 686 |
| Fsp4HI | GCNGC | 2 cut(s) | 474, 477 |
| FspBI | CTAG | 2 cut(s) | 489, 522 |
| GlaI | GCGC | 1 cut(s) | 53 |
| GluI | GCNGC | 2 cut(s) | 474, 477 |
| HaeIII | GGCC | 3 cut(s) | 80, 406, 564 |
| HapII | CCGG | 1 cut(s) | 235 |
| HgaI | GACGC | 1 cut(s) | 227 |
| HhaI | GCGC | 1 cut(s) | 54 |
| Hin1I | GRCGYC | 1 cut(s) | 238 |
| Hin1II | CATG | 5 cut(s) | 225, 263, 270, 440, 752 |
| Hin6I | GCGC | 1 cut(s) | 52 |
| HinP1I | GCGC | 1 cut(s) | 52 |
| HinfI | GANTC | 1 cut(s) | 677 |
| HpaII | CCGG | 1 cut(s) | 235 |
| HphI | GGTGA | 1 cut(s) | 647 |
| Hpy188I | TCNGA | 2 cut(s) | 281, 850 |
| Hpy188III | TCNNGA | 1 cut(s) | 197 |
| HpyAV | CCTTC | 2 cut(s) | 85, 575 |
| HpyCH4III | ACNGT | 2 cut(s) | 43, 792 |
| HpyCH4IV | ACGT | 4 cut(s) | 105, 275, 416, 592 |
| HpyCH4V | TGCA | 4 cut(s) | 266, 395, 436, 787 |
| HpySE526I | ACGT | 4 cut(s) | 105, 275, 416, 592 |
| Hsp92I | GRCGYC | 1 cut(s) | 238 |
| Hsp92II | CATG | 5 cut(s) | 225, 263, 270, 440, 752 |
| HspAI | GCGC | 1 cut(s) | 52 |
| Ksp22I | TGATCA | 1 cut(s) | 526 |
| Kzo9I | GATC | 2 cut(s) | 526, 820 |
| LmnI | GCTCC | 2 cut(s) | 49, 420 |
| Lsp1109I | GCAGC | 2 cut(s) | 485, 488 |
| LweI | GCATC | 1 cut(s) | 109 |
| MaeI | CTAG | 2 cut(s) | 489, 522 |
| MaeII | ACGT | 4 cut(s) | 105, 275, 416, 592 |
| MaeIII | GTNAC | 2 cut(s) | 377, 635 |
| MalI | GATC | 2 cut(s) | 528, 822 |
| MboI | GATC | 2 cut(s) | 526, 820 |
| MboII | GAAGA | 2 cut(s) | 586, 830 |
| MluCI | AATT | 4 cut(s) | 20, 34, 114, 835 |
| MlyI | GAGTC | 1 cut(s) | 671 |
| MmeI | TCCRAC | 2 cut(s) | 68, 426 |
| MnlI | CCTC | 6 cut(s) | 62, 65, 198, 267, 463, 825 |
| MseI | TTAA | 7 cut(s) | 176, 288, 300, 357, 369, 689, 843 |
| MslI | CAYNNNNRTG | 3 cut(s) | 140, 415, 510 |
| MspI | CCGG | 1 cut(s) | 235 |
| NdeI | CATATG | 1 cut(s) | 507 |
| NdeII | GATC | 2 cut(s) | 526, 820 |
| NlaIII | CATG | 5 cut(s) | 225, 263, 270, 440, 752 |
| NlaIV | GGNNCC | 1 cut(s) | 405 |
| NmuCI | GTSAC | 1 cut(s) | 635 |
| PflFI | GACNNNGTC | 1 cut(s) | 641 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 670 |
| PkrI | GCNGC | 2 cut(s) | 475, 478 |
| PleI | GAGTC | 1 cut(s) | 671 |
| PmaCI | CACGTG | 1 cut(s) | 417 |
| PmlI | CACGTG | 1 cut(s) | 417 |
| PpsI | GAGTC | 1 cut(s) | 671 |
| Ppu21I | YACGTR | 1 cut(s) | 417 |
| PshBI | ATTAAT | 2 cut(s) | 300, 369 |
| PspCI | CACGTG | 1 cut(s) | 417 |
| PspN4I | GGNNCC | 1 cut(s) | 405 |
| PspPI | GGNCC | 1 cut(s) | 404 |
| PsyI | GACNNNGTC | 1 cut(s) | 641 |
| RsaI | GTAC | 3 cut(s) | 29, 40, 794 |
| RsaNI | GTAC | 3 cut(s) | 28, 39, 793 |
| RseI | CAYNNNNRTG | 3 cut(s) | 140, 415, 510 |
| SaqAI | TTAA | 7 cut(s) | 176, 288, 300, 357, 369, 689, 843 |
| SatI | GCNGC | 2 cut(s) | 474, 477 |
| Sau3AI | GATC | 2 cut(s) | 526, 820 |
| Sau96I | GGNCC | 1 cut(s) | 404 |
| SchI | GAGTC | 1 cut(s) | 671 |
| SfaNI | GCATC | 1 cut(s) | 109 |
| SfcI | CTRYAG | 1 cut(s) | 383 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 140, 415, 510 |
| SmlI | CTYRAG | 1 cut(s) | 773 |
| SmoI | CTYRAG | 1 cut(s) | 773 |
| Sse9I | AATT | 4 cut(s) | 20, 34, 114, 835 |
| SsiI | CCGC | 2 cut(s) | 710, 757 |
| SspMI | CTAG | 2 cut(s) | 489, 522 |
| StyI | CCWWGG | 1 cut(s) | 569 |
| TaaI | ACNGT | 2 cut(s) | 43, 792 |
| TaiI | ACGT | 4 cut(s) | 108, 278, 419, 595 |
| TaqI | TCGA | 1 cut(s) | 823 |
| TaqII | GACCGA | 1 cut(s) | 349 |
| TasI | AATT | 4 cut(s) | 20, 34, 114, 835 |
| TatI | WGTACW | 1 cut(s) | 38 |
| Tru1I | TTAA | 7 cut(s) | 176, 288, 300, 357, 369, 689, 843 |
| Tru9I | TTAA | 7 cut(s) | 176, 288, 300, 357, 369, 689, 843 |
| TscAI | CASTG | 1 cut(s) | 731 |
| TseFI | GTSAC | 1 cut(s) | 635 |
| TseI | GCWGC | 2 cut(s) | 473, 476 |
| Tsp45I | GTSAC | 1 cut(s) | 635 |
| TspDTI | ATGAA | 5 cut(s) | 124, 210, 453, 476, 636 |
| TspRI | CASTG | 1 cut(s) | 731 |
| Tth111I | GACNNNGTC | 1 cut(s) | 641 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 670 |
| VspI | ATTAAT | 2 cut(s) | 300, 369 |
| XapI | RAATTY | 1 cut(s) | 835 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 414, 512 |
| XspI | CTAG | 2 cut(s) | 489, 522 |