Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 38 |
| AciI | CCGC | 1 cut(s) | 332 |
| AclWI | GGATC | 2 cut(s) | 168, 225 |
| AgsI | TTSAA | 1 cut(s) | 85 |
| AluBI | AGCT | 2 cut(s) | 208, 390 |
| AluI | AGCT | 2 cut(s) | 208, 390 |
| Alw21I | GWGCWC | 1 cut(s) | 215 |
| Alw26I | GTCTC | 2 cut(s) | 123, 261 |
| AlwI | GGATC | 2 cut(s) | 168, 225 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 393 |
| AoxI | GGCC | 1 cut(s) | 378 |
| ApeKI | GCWGC | 4 cut(s) | 251, 387, 390, 393 |
| AspS9I | GGNCC | 3 cut(s) | 27, 168, 378 |
| AvaII | GGWCC | 2 cut(s) | 27, 168 |
| Bbv12I | GWGCWC | 1 cut(s) | 215 |
| BbvI | GCAGC | 4 cut(s) | 263, 377, 380, 399 |
| BccI | CCATC | 1 cut(s) | 322 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 351, 385 |
| BcoDI | GTCTC | 2 cut(s) | 123, 261 |
| BfaI | CTAG | 3 cut(s) | 296, 359, 403 |
| BfmI | CTRYAG | 1 cut(s) | 31 |
| BfuAI | ACCTGC | 1 cut(s) | 38 |
| BisI | GCNGC | 4 cut(s) | 252, 388, 391, 394 |
| BlpI | GCTNAGC | 1 cut(s) | 209 |
| BlsI | GCNGC | 4 cut(s) | 253, 389, 392, 395 |
| Bme18I | GGWCC | 2 cut(s) | 27, 168 |
| BmgT120I | GGNCC | 3 cut(s) | 27, 168, 378 |
| BmsI | GCATC | 1 cut(s) | 181 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 209 |
| BpuEI | CTTGAG | 1 cut(s) | 105 |
| BsaI | GGTCTC | 1 cut(s) | 123 |
| BsaJI | CCNNGG | 1 cut(s) | 320 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 82, 112 |
| Bse118I | RCCGGY | 1 cut(s) | 299 |
| Bse3DI | GCAATG | 1 cut(s) | 403 |
| BseDI | CCNNGG | 1 cut(s) | 320 |
| BseMI | GCAATG | 1 cut(s) | 403 |
| BseMII | CTCAG | 2 cut(s) | 71, 200 |
| BseRI | GAGGAG | 1 cut(s) | 125 |
| BseXI | GCAGC | 4 cut(s) | 263, 377, 380, 399 |
| BshFI | GGCC | 1 cut(s) | 380 |
| BsiHKAI | GWGCWC | 1 cut(s) | 215 |
| BsiSI | CCGG | 1 cut(s) | 300 |
| BsmAI | GTCTC | 2 cut(s) | 123, 261 |
| BsnI | GGCC | 1 cut(s) | 380 |
| Bso31I | GGTCTC | 1 cut(s) | 123 |
| Bsp1286I | GDGCHC | 1 cut(s) | 215 |
| Bsp143I | GATC | 2 cut(s) | 160, 217 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 209 |
| Bsp19I | CCATGG | 1 cut(s) | 320 |
| BspACI | CCGC | 1 cut(s) | 332 |
| BspANI | GGCC | 1 cut(s) | 380 |
| BspCNI | CTCAG | 2 cut(s) | 70, 201 |
| BspMAI | CTGCAG | 1 cut(s) | 35 |
| BspMI | ACCTGC | 1 cut(s) | 38 |
| BspPI | GGATC | 2 cut(s) | 168, 225 |
| BspQI | GCTCTTC | 1 cut(s) | 138 |
| BspTNI | GGTCTC | 1 cut(s) | 123 |
| BsrDI | GCAATG | 1 cut(s) | 403 |
| BsrFI | RCCGGY | 1 cut(s) | 299 |
| BssAI | RCCGGY | 1 cut(s) | 299 |
| BssECI | CCNNGG | 1 cut(s) | 320 |
| BssMI | GATC | 2 cut(s) | 160, 217 |
| BssT1I | CCWWGG | 1 cut(s) | 320 |
| Bst6I | CTCTTC | 2 cut(s) | 138, 321 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 393 |
| BstDEI | CTNAG | 2 cut(s) | 57, 209 |
| BstDSI | CCRYGG | 1 cut(s) | 320 |
| BstKTI | GATC | 2 cut(s) | 163, 220 |
| BstMAI | GTCTC | 2 cut(s) | 123, 261 |
| BstMBI | GATC | 2 cut(s) | 160, 217 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 393 |
| BstSFI | CTRYAG | 1 cut(s) | 31 |
| BstV1I | GCAGC | 4 cut(s) | 263, 377, 380, 399 |
| BstX2I | RGATCY | 1 cut(s) | 160 |
| BstYI | RGATCY | 1 cut(s) | 160 |
| BsuRI | GGCC | 1 cut(s) | 380 |
| BtgI | CCRYGG | 1 cut(s) | 320 |
| BveI | ACCTGC | 1 cut(s) | 38 |
| CaiI | CAGNNNCTG | 1 cut(s) | 393 |
| Cfr10I | RCCGGY | 1 cut(s) | 299 |
| Cfr13I | GGNCC | 3 cut(s) | 27, 168, 378 |
| CviAII | CATG | 4 cut(s) | 107, 276, 309, 321 |
| CviJI | RGCY | 5 cut(s) | 131, 208, 299, 380, 390 |
| CviKI_1 | RGCY | 5 cut(s) | 131, 208, 299, 380, 390 |
| DdeI | CTNAG | 2 cut(s) | 57, 209 |
| DpnI | GATC | 2 cut(s) | 162, 219 |
| DpnII | GATC | 2 cut(s) | 160, 217 |
| Eam1104I | CTCTTC | 2 cut(s) | 138, 321 |
| EarI | CTCTTC | 2 cut(s) | 138, 321 |
| Eco130I | CCWWGG | 1 cut(s) | 320 |
| Eco31I | GGTCTC | 1 cut(s) | 123 |
| Eco47I | GGWCC | 2 cut(s) | 27, 168 |
| EcoT14I | CCWWGG | 1 cut(s) | 320 |
| ErhI | CCWWGG | 1 cut(s) | 320 |
| FaeI | CATG | 4 cut(s) | 110, 279, 312, 324 |
| FaiI | YATR | 9 cut(s) | 41, 108, 156, 158, 241, 243, 277, 310, 322 |
| FatI | CATG | 4 cut(s) | 106, 275, 308, 320 |
| FauI | CCCGC | 1 cut(s) | 325 |
| FauNDI | CATATG | 1 cut(s) | 156 |
| Fnu4HI | GCNGC | 4 cut(s) | 252, 388, 391, 394 |
| Fsp4HI | GCNGC | 4 cut(s) | 252, 388, 391, 394 |
| FspBI | CTAG | 3 cut(s) | 296, 359, 403 |
| GluI | GCNGC | 4 cut(s) | 252, 388, 391, 394 |
| HaeIII | GGCC | 1 cut(s) | 380 |
| HapII | CCGG | 1 cut(s) | 300 |
| Hin1II | CATG | 4 cut(s) | 110, 279, 312, 324 |
| HincII | GTYRAC | 1 cut(s) | 305 |
| HindII | GTYRAC | 1 cut(s) | 305 |
| HpaII | CCGG | 1 cut(s) | 300 |
| Hpy166II | GTNNAC | 2 cut(s) | 27, 305 |
| Hpy188I | TCNGA | 2 cut(s) | 60, 290 |
| Hpy8I | GTNNAC | 2 cut(s) | 27, 305 |
| HpyCH4V | TGCA | 4 cut(s) | 7, 33, 312, 396 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 393 |
| HpyF3I | CTNAG | 2 cut(s) | 57, 209 |
| Hsp92II | CATG | 4 cut(s) | 110, 279, 312, 324 |
| Kzo9I | GATC | 2 cut(s) | 160, 217 |
| LguI | GCTCTTC | 1 cut(s) | 138 |
| LmnI | GCTCC | 1 cut(s) | 90 |
| LpnPI | CCDG | 3 cut(s) | 43, 113, 313 |
| Lsp1109I | GCAGC | 4 cut(s) | 263, 377, 380, 399 |
| LweI | GCATC | 1 cut(s) | 181 |
| MaeI | CTAG | 3 cut(s) | 296, 359, 403 |
| MalI | GATC | 2 cut(s) | 162, 219 |
| MboI | GATC | 2 cut(s) | 160, 217 |
| MboII | GAAGA | 3 cut(s) | 11, 125, 308 |
| MflI | RGATCY | 1 cut(s) | 160 |
| MhlI | GDGCHC | 1 cut(s) | 215 |
| MluCI | AATT | 1 cut(s) | 46 |
| MnlI | CCTC | 4 cut(s) | 29, 103, 106, 369 |
| MseI | TTAA | 1 cut(s) | 342 |
| MslI | CAYNNNNRTG | 2 cut(s) | 155, 189 |
| MspA1I | CMGCKG | 1 cut(s) | 390 |
| MspI | CCGG | 1 cut(s) | 300 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 393 |
| NcoI | CCATGG | 1 cut(s) | 320 |
| NdeI | CATATG | 1 cut(s) | 156 |
| NdeII | GATC | 2 cut(s) | 160, 217 |
| NlaIII | CATG | 4 cut(s) | 110, 279, 312, 324 |
| PciSI | GCTCTTC | 1 cut(s) | 138 |
| PkrI | GCNGC | 4 cut(s) | 253, 389, 392, 395 |
| PspPI | GGNCC | 3 cut(s) | 27, 168, 378 |
| PstI | CTGCAG | 1 cut(s) | 35 |
| PstNI | CAGNNNCTG | 1 cut(s) | 393 |
| PsuI | RGATCY | 1 cut(s) | 160 |
| PvuII | CAGCTG | 1 cut(s) | 390 |
| RseI | CAYNNNNRTG | 2 cut(s) | 155, 189 |
| SapI | GCTCTTC | 1 cut(s) | 138 |
| SaqAI | TTAA | 1 cut(s) | 342 |
| SatI | GCNGC | 4 cut(s) | 252, 388, 391, 394 |
| Sau3AI | GATC | 2 cut(s) | 160, 217 |
| Sau96I | GGNCC | 3 cut(s) | 27, 168, 378 |
| SduI | GDGCHC | 1 cut(s) | 215 |
| SetI | ASST | 6 cut(s) | 32, 127, 173, 210, 360, 392 |
| SfaNI | GCATC | 1 cut(s) | 181 |
| SfcI | CTRYAG | 1 cut(s) | 31 |
| SinI | GGWCC | 2 cut(s) | 27, 168 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 155, 189 |
| SmlI | CTYRAG | 1 cut(s) | 120 |
| SmoI | CTYRAG | 1 cut(s) | 120 |
| Sse9I | AATT | 1 cut(s) | 46 |
| SsiI | CCGC | 1 cut(s) | 332 |
| SspI | AATATT | 1 cut(s) | 16 |
| SspMI | CTAG | 3 cut(s) | 296, 359, 403 |
| StyI | CCWWGG | 1 cut(s) | 320 |
| TasI | AATT | 1 cut(s) | 46 |
| Tru1I | TTAA | 1 cut(s) | 342 |
| Tru9I | TTAA | 1 cut(s) | 342 |
| TseI | GCWGC | 4 cut(s) | 251, 387, 390, 393 |
| TspDTI | ATGAA | 1 cut(s) | 368 |
| TspGWI | ACGGA | 2 cut(s) | 181, 230 |
| VpaK11BI | GGWCC | 2 cut(s) | 27, 168 |
| XspI | CTAG | 3 cut(s) | 296, 359, 403 |