ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 324 |
| AcsI | RAATTY | 1 cut(s) | 155 |
| AfaI | GTAC | 1 cut(s) | 85 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 166 |
| AgsI | TTSAA | 3 cut(s) | 13, 260, 464 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 35, 67 |
| AluBI | AGCT | 1 cut(s) | 131 |
| AluI | AGCT | 1 cut(s) | 131 |
| Alw21I | GWGCWC | 1 cut(s) | 93 |
| Alw26I | GTCTC | 2 cut(s) | 116, 238 |
| Alw44I | GTGCAC | 1 cut(s) | 89 |
| AlwI | GGATC | 1 cut(s) | 324 |
| Ama87I | CYCGRG | 1 cut(s) | 55 |
| AoxI | GGCC | 2 cut(s) | 213, 432 |
| ApaLI | GTGCAC | 1 cut(s) | 89 |
| ApeKI | GCWGC | 1 cut(s) | 128 |
| ApoI | RAATTY | 1 cut(s) | 155 |
| AspS9I | GGNCC | 4 cut(s) | 59, 148, 213, 475 |
| AsuHPI | GGTGA | 1 cut(s) | 406 |
| AvaI | CYCGRG | 1 cut(s) | 55 |
| AvaII | GGWCC | 3 cut(s) | 59, 148, 475 |
| BaeGI | GKGCMC | 1 cut(s) | 93 |
| Bbv12I | GWGCWC | 1 cut(s) | 93 |
| BbvI | GCAGC | 1 cut(s) | 140 |
| BccI | CCATC | 1 cut(s) | 229 |
| BclI | TGATCA | 1 cut(s) | 181 |
| BcoDI | GTCTC | 2 cut(s) | 116, 238 |
| BisI | GCNGC | 1 cut(s) | 129 |
| BlsI | GCNGC | 1 cut(s) | 130 |
| Bme18I | GGWCC | 3 cut(s) | 59, 148, 475 |
| BmeT110I | CYCGRG | 1 cut(s) | 55 |
| BmgT120I | GGNCC | 4 cut(s) | 59, 148, 213, 475 |
| BmiI | GGNNCC | 2 cut(s) | 60, 214 |
| Bsa29I | ATCGAT | 1 cut(s) | 456 |
| BsaI | GGTCTC | 1 cut(s) | 116 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 35, 65, 67, 97, 232, 262 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 166 |
| Bse3DI | GCAATG | 1 cut(s) | 323 |
| BseCI | ATCGAT | 1 cut(s) | 456 |
| BseGI | GGATG | 1 cut(s) | 475 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 166 |
| BseMI | GCAATG | 1 cut(s) | 323 |
| BseRI | GAGGAG | 1 cut(s) | 256 |
| BseSI | GKGCMC | 1 cut(s) | 93 |
| BseXI | GCAGC | 1 cut(s) | 140 |
| BsgI | GTGCAG | 1 cut(s) | 384 |
| Bsh1285I | CGRYCG | 1 cut(s) | 456 |
| BshFI | GGCC | 2 cut(s) | 215, 434 |
| BshVI | ATCGAT | 1 cut(s) | 456 |
| BsiEI | CGRYCG | 1 cut(s) | 456 |
| BsiHKAI | GWGCWC | 1 cut(s) | 93 |
| BsiHKCI | CYCGRG | 1 cut(s) | 55 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 166 |
| BsmAI | GTCTC | 2 cut(s) | 116, 238 |
| BsmBI | CGTCTC | 1 cut(s) | 238 |
| BsnI | GGCC | 2 cut(s) | 215, 434 |
| Bso31I | GGTCTC | 1 cut(s) | 116 |
| BsoBI | CYCGRG | 1 cut(s) | 55 |
| Bsp1286I | GDGCHC | 1 cut(s) | 93 |
| Bsp143I | GATC | 3 cut(s) | 181, 316, 453 |
| BspANI | GGCC | 2 cut(s) | 215, 434 |
| BspDI | ATCGAT | 1 cut(s) | 456 |
| BspHI | TCATGA | 1 cut(s) | 114 |
| BspLI | GGNNCC | 2 cut(s) | 60, 214 |
| BspPI | GGATC | 1 cut(s) | 324 |
| BspTNI | GGTCTC | 1 cut(s) | 116 |
| BsrDI | GCAATG | 1 cut(s) | 323 |
| BssMI | GATC | 3 cut(s) | 181, 316, 453 |
| Bst4CI | ACNGT | 1 cut(s) | 88 |
| BstF5I | GGATG | 1 cut(s) | 475 |
| BstKTI | GATC | 3 cut(s) | 184, 319, 456 |
| BstMAI | GTCTC | 2 cut(s) | 116, 238 |
| BstMBI | GATC | 3 cut(s) | 181, 316, 453 |
| BstMCI | CGRYCG | 1 cut(s) | 456 |
| BstSLI | GKGCMC | 1 cut(s) | 93 |
| BstV1I | GCAGC | 1 cut(s) | 140 |
| Bsu15I | ATCGAT | 1 cut(s) | 456 |
| BsuRI | GGCC | 2 cut(s) | 215, 434 |
| BsuTUI | ATCGAT | 1 cut(s) | 456 |
| BtsCI | GGATG | 1 cut(s) | 475 |
| BtsIMutI | CAGTG | 1 cut(s) | 93 |
| CciI | TCATGA | 1 cut(s) | 114 |
| Cfr13I | GGNCC | 4 cut(s) | 59, 148, 213, 475 |
| ClaI | ATCGAT | 1 cut(s) | 456 |
| Csp6I | GTAC | 1 cut(s) | 84 |
| CviAII | CATG | 3 cut(s) | 72, 115, 152 |
| CviJI | RGCY | 4 cut(s) | 131, 215, 377, 434 |
| CviKI_1 | RGCY | 4 cut(s) | 131, 215, 377, 434 |
| CviQI | GTAC | 1 cut(s) | 84 |
| DpnI | GATC | 3 cut(s) | 183, 318, 455 |
| DpnII | GATC | 3 cut(s) | 181, 316, 453 |
| Eco147I | AGGCCT | 1 cut(s) | 434 |
| Eco31I | GGTCTC | 1 cut(s) | 116 |
| Eco32I | GATATC | 1 cut(s) | 449 |
| Eco47I | GGWCC | 3 cut(s) | 59, 148, 475 |
| Eco88I | CYCGRG | 1 cut(s) | 55 |
| EcoO109I | RGGNCCY | 1 cut(s) | 213 |
| EcoRI | GAATTC | 1 cut(s) | 155 |
| EcoRV | GATATC | 1 cut(s) | 449 |
| Esp3I | CGTCTC | 1 cut(s) | 238 |
| FaeI | CATG | 3 cut(s) | 75, 118, 155 |
| FaiI | YATR | 7 cut(s) | 23, 73, 116, 146, 153, 162, 164 |
| FatI | CATG | 3 cut(s) | 71, 114, 151 |
| FauNDI | CATATG | 1 cut(s) | 162 |
| FbaI | TGATCA | 1 cut(s) | 181 |
| Fnu4HI | GCNGC | 1 cut(s) | 129 |
| FokI | GGATG | 1 cut(s) | 482 |
| Fsp4HI | GCNGC | 1 cut(s) | 129 |
| GluI | GCNGC | 1 cut(s) | 129 |
| HaeIII | GGCC | 2 cut(s) | 215, 434 |
| Hin1II | CATG | 3 cut(s) | 75, 118, 155 |
| HinfI | GANTC | 1 cut(s) | 9 |
| HphI | GGTGA | 1 cut(s) | 406 |
| Hpy166II | GTNNAC | 2 cut(s) | 38, 91 |
| Hpy188I | TCNGA | 1 cut(s) | 453 |
| Hpy188III | TCNNGA | 2 cut(s) | 115, 268 |
| Hpy8I | GTNNAC | 2 cut(s) | 38, 91 |
| HpyCH4III | ACNGT | 1 cut(s) | 88 |
| HpyCH4IV | ACGT | 1 cut(s) | 247 |
| HpyCH4V | TGCA | 3 cut(s) | 91, 365, 422 |
| HpySE526I | ACGT | 1 cut(s) | 247 |
| Hsp92II | CATG | 3 cut(s) | 75, 118, 155 |
| Ksp22I | TGATCA | 1 cut(s) | 181 |
| Kzo9I | GATC | 3 cut(s) | 181, 316, 453 |
| LpnPI | CCDG | 4 cut(s) | 2, 26, 253, 295 |
| Lsp1109I | GCAGC | 1 cut(s) | 140 |
| MaeII | ACGT | 1 cut(s) | 247 |
| MaeIII | GTNAC | 1 cut(s) | 401 |
| MalI | GATC | 3 cut(s) | 183, 318, 455 |
| MboI | GATC | 3 cut(s) | 181, 316, 453 |
| MboII | GAAGA | 1 cut(s) | 212 |
| MhlI | GDGCHC | 1 cut(s) | 93 |
| MluCI | AATT | 3 cut(s) | 63, 155, 371 |
| MmeI | TCCRAC | 1 cut(s) | 81 |
| MnlI | CCTC | 8 cut(s) | 37, 160, 234, 298, 307, 361, 445, 466 |
| MseI | TTAA | 4 cut(s) | 273, 344, 353, 428 |
| NdeI | CATATG | 1 cut(s) | 162 |
| NdeII | GATC | 3 cut(s) | 181, 316, 453 |
| NlaIII | CATG | 3 cut(s) | 75, 118, 155 |
| NlaIV | GGNNCC | 2 cut(s) | 60, 214 |
| NmuCI | GTSAC | 1 cut(s) | 401 |
| PagI | TCATGA | 1 cut(s) | 114 |
| PceI | AGGCCT | 1 cut(s) | 434 |
| PfeI | GAWTC | 1 cut(s) | 9 |
| PkrI | GCNGC | 1 cut(s) | 130 |
| Ple19I | CGATCG | 1 cut(s) | 456 |
| PspN4I | GGNNCC | 2 cut(s) | 60, 214 |
| PspPI | GGNCC | 4 cut(s) | 59, 148, 213, 475 |
| PvuI | CGATCG | 1 cut(s) | 456 |
| RsaI | GTAC | 1 cut(s) | 85 |
| RsaNI | GTAC | 1 cut(s) | 84 |
| SaqAI | TTAA | 4 cut(s) | 273, 344, 353, 428 |
| SatI | GCNGC | 1 cut(s) | 129 |
| Sau3AI | GATC | 3 cut(s) | 181, 316, 453 |
| Sau96I | GGNCC | 4 cut(s) | 59, 148, 213, 475 |
| SduI | GDGCHC | 1 cut(s) | 93 |
| SinI | GGWCC | 3 cut(s) | 59, 148, 475 |
| Sse9I | AATT | 3 cut(s) | 63, 155, 371 |
| SseBI | AGGCCT | 1 cut(s) | 434 |
| StuI | AGGCCT | 1 cut(s) | 434 |
| TaaI | ACNGT | 1 cut(s) | 88 |
| TaiI | ACGT | 1 cut(s) | 250 |
| TaqI | TCGA | 1 cut(s) | 456 |
| TasI | AATT | 3 cut(s) | 63, 155, 371 |
| TfiI | GAWTC | 1 cut(s) | 9 |
| Tru1I | TTAA | 4 cut(s) | 273, 344, 353, 428 |
| Tru9I | TTAA | 4 cut(s) | 273, 344, 353, 428 |
| TscAI | CASTG | 1 cut(s) | 93 |
| TseFI | GTSAC | 1 cut(s) | 401 |
| TseI | GCWGC | 1 cut(s) | 128 |
| Tsp45I | GTSAC | 1 cut(s) | 401 |
| TspDTI | ATGAA | 4 cut(s) | 131, 138, 168, 312 |
| TspRI | CASTG | 1 cut(s) | 93 |
| VneI | GTGCAC | 1 cut(s) | 89 |
| VpaK11BI | GGWCC | 3 cut(s) | 59, 148, 475 |
| XapI | RAATTY | 1 cut(s) | 155 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 69 |