ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 529 |
| AccI | GTMKAC | 1 cut(s) | 174 |
| AciI | CCGC | 3 cut(s) | 247, 529, 556 |
| AcsI | RAATTY | 3 cut(s) | 58, 268, 599 |
| AcuI | CTGAAG | 1 cut(s) | 515 |
| AfaI | GTAC | 1 cut(s) | 167 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 219 |
| AgsI | TTSAA | 5 cut(s) | 65, 104, 448, 485, 577 |
| AjiI | CACGTC | 1 cut(s) | 172 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 76, 108 |
| AluBI | AGCT | 5 cut(s) | 137, 157, 454, 476, 514 |
| AluI | AGCT | 5 cut(s) | 137, 157, 454, 476, 514 |
| Alw26I | GTCTC | 2 cut(s) | 232, 544 |
| AoxI | GGCC | 1 cut(s) | 67 |
| ApeKI | GCWGC | 2 cut(s) | 332, 454 |
| ApoI | RAATTY | 3 cut(s) | 58, 268, 599 |
| AseI | ATTAAT | 2 cut(s) | 12, 567 |
| AspS9I | GGNCC | 3 cut(s) | 68, 182, 558 |
| AsuC2I | CCSGG | 1 cut(s) | 562 |
| AsuHPI | GGTGA | 2 cut(s) | 185, 596 |
| AvaII | GGWCC | 2 cut(s) | 182, 558 |
| BaeGI | GKGCMC | 1 cut(s) | 353 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 149, 182 |
| BbvI | GCAGC | 2 cut(s) | 319, 441 |
| BccI | CCATC | 1 cut(s) | 193 |
| BclI | TGATCA | 2 cut(s) | 34, 190 |
| BcnI | CCSGG | 1 cut(s) | 562 |
| BcoDI | GTCTC | 2 cut(s) | 232, 544 |
| BisI | GCNGC | 3 cut(s) | 333, 455, 530 |
| BlsI | GCNGC | 3 cut(s) | 334, 456, 531 |
| Bme1390I | CCNGG | 1 cut(s) | 562 |
| Bme18I | GGWCC | 2 cut(s) | 182, 558 |
| BmgBI | CACGTC | 1 cut(s) | 172 |
| BmgT120I | GGNCC | 3 cut(s) | 68, 182, 558 |
| BmiI | GGNNCC | 1 cut(s) | 560 |
| BmrFI | CCNGG | 1 cut(s) | 562 |
| BoxI | GACNNNNGTC | 2 cut(s) | 180, 556 |
| Bpu10I | CCTNAGC | 1 cut(s) | 472 |
| BpuMI | CCSGG | 1 cut(s) | 562 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 76, 106 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 219 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 219 |
| BseSI | GKGCMC | 1 cut(s) | 353 |
| BseXI | GCAGC | 2 cut(s) | 319, 441 |
| BsgI | GTGCAG | 1 cut(s) | 326 |
| BshFI | GGCC | 1 cut(s) | 69 |
| BsiSI | CCGG | 1 cut(s) | 562 |
| BslFI | GGGAC | 1 cut(s) | 544 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 219 |
| BsmAI | GTCTC | 2 cut(s) | 232, 544 |
| BsmFI | GGGAC | 1 cut(s) | 544 |
| BsnI | GGCC | 1 cut(s) | 69 |
| Bsp1286I | GDGCHC | 1 cut(s) | 353 |
| Bsp143I | GATC | 2 cut(s) | 34, 190 |
| BspACI | CCGC | 3 cut(s) | 247, 529, 556 |
| BspANI | GGCC | 1 cut(s) | 69 |
| BspLI | GGNNCC | 1 cut(s) | 560 |
| BsrBI | CCGCTC | 1 cut(s) | 529 |
| BssMI | GATC | 2 cut(s) | 34, 190 |
| Bst6I | CTCTTC | 1 cut(s) | 534 |
| BstDEI | CTNAG | 1 cut(s) | 472 |
| BstKTI | GATC | 2 cut(s) | 37, 193 |
| BstMAI | GTCTC | 2 cut(s) | 232, 544 |
| BstMBI | GATC | 2 cut(s) | 34, 190 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 180, 556 |
| BstSCI | CCNGG | 1 cut(s) | 560 |
| BstSLI | GKGCMC | 1 cut(s) | 353 |
| BstV1I | GCAGC | 2 cut(s) | 319, 441 |
| BsuRI | GGCC | 1 cut(s) | 69 |
| BtrI | CACGTC | 1 cut(s) | 172 |
| Cfr13I | GGNCC | 3 cut(s) | 68, 182, 558 |
| Csp6I | GTAC | 1 cut(s) | 166 |
| CviAII | CATG | 1 cut(s) | 533 |
| CviJI | RGCY | 8 cut(s) | 5, 69, 119, 137, 157, 454, 476, 514 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 69, 119, 137, 157, 454, 476, 514 |
| CviQI | GTAC | 1 cut(s) | 166 |
| DdeI | CTNAG | 1 cut(s) | 472 |
| DpnI | GATC | 2 cut(s) | 36, 192 |
| DpnII | GATC | 2 cut(s) | 34, 190 |
| Eam1104I | CTCTTC | 1 cut(s) | 534 |
| EarI | CTCTTC | 1 cut(s) | 534 |
| EciI | GGCGGA | 1 cut(s) | 262 |
| Eco47I | GGWCC | 2 cut(s) | 182, 558 |
| Eco57I | CTGAAG | 1 cut(s) | 515 |
| FaeI | CATG | 1 cut(s) | 536 |
| FaiI | YATR | 4 cut(s) | 78, 203, 371, 534 |
| FaqI | GGGAC | 1 cut(s) | 544 |
| FatI | CATG | 1 cut(s) | 532 |
| FbaI | TGATCA | 2 cut(s) | 34, 190 |
| FblI | GTMKAC | 1 cut(s) | 174 |
| Fnu4HI | GCNGC | 3 cut(s) | 333, 455, 530 |
| Fsp4HI | GCNGC | 3 cut(s) | 333, 455, 530 |
| GluI | GCNGC | 3 cut(s) | 333, 455, 530 |
| HaeIII | GGCC | 1 cut(s) | 69 |
| HapII | CCGG | 1 cut(s) | 562 |
| Hin1II | CATG | 1 cut(s) | 536 |
| HincII | GTYRAC | 2 cut(s) | 175, 343 |
| HindII | GTYRAC | 2 cut(s) | 175, 343 |
| HindIII | AAGCTT | 1 cut(s) | 135 |
| HinfI | GANTC | 1 cut(s) | 423 |
| HpaII | CCGG | 1 cut(s) | 562 |
| HphI | GGTGA | 2 cut(s) | 185, 596 |
| Hpy166II | GTNNAC | 3 cut(s) | 166, 175, 343 |
| Hpy188I | TCNGA | 1 cut(s) | 190 |
| Hpy188III | TCNNGA | 1 cut(s) | 101 |
| Hpy8I | GTNNAC | 3 cut(s) | 166, 175, 343 |
| Hpy99I | CGWCG | 1 cut(s) | 176 |
| HpyAV | CCTTC | 7 cut(s) | 59, 206, 246, 281, 502, 571, 575 |
| HpyCH4IV | ACGT | 2 cut(s) | 171, 345 |
| HpyCH4V | TGCA | 4 cut(s) | 294, 307, 335, 606 |
| HpyF3I | CTNAG | 1 cut(s) | 472 |
| HpySE526I | ACGT | 2 cut(s) | 171, 345 |
| Hsp92II | CATG | 1 cut(s) | 536 |
| Ksp22I | TGATCA | 2 cut(s) | 34, 190 |
| Kzo9I | GATC | 2 cut(s) | 34, 190 |
| LmnI | GCTCC | 2 cut(s) | 511, 526 |
| LpnPI | CCDG | 3 cut(s) | 293, 430, 575 |
| Lsp1109I | GCAGC | 2 cut(s) | 319, 441 |
| MaeII | ACGT | 2 cut(s) | 171, 345 |
| MalI | GATC | 2 cut(s) | 36, 192 |
| MbiI | CCGCTC | 1 cut(s) | 529 |
| MboI | GATC | 2 cut(s) | 34, 190 |
| MboII | GAAGA | 5 cut(s) | 332, 432, 508, 548, 551 |
| MfeI | CAATTG | 1 cut(s) | 30 |
| MhlI | GDGCHC | 1 cut(s) | 353 |
| MnlI | CCTC | 4 cut(s) | 19, 217, 277, 304 |
| MseI | TTAA | 5 cut(s) | 12, 150, 434, 516, 567 |
| MspA1I | CMGCKG | 1 cut(s) | 556 |
| MspI | CCGG | 1 cut(s) | 562 |
| MspR9I | CCNGG | 1 cut(s) | 562 |
| MunI | CAATTG | 1 cut(s) | 30 |
| NciI | CCSGG | 1 cut(s) | 562 |
| NdeII | GATC | 2 cut(s) | 34, 190 |
| NlaIII | CATG | 1 cut(s) | 536 |
| NlaIV | GGNNCC | 1 cut(s) | 560 |
| PfeI | GAWTC | 1 cut(s) | 423 |
| PfoI | TCCNGGA | 1 cut(s) | 560 |
| PkrI | GCNGC | 3 cut(s) | 334, 456, 531 |
| PshAI | GACNNNNGTC | 2 cut(s) | 180, 556 |
| PshBI | ATTAAT | 2 cut(s) | 12, 567 |
| PspN4I | GGNNCC | 1 cut(s) | 560 |
| PspPI | GGNCC | 3 cut(s) | 68, 182, 558 |
| RsaI | GTAC | 1 cut(s) | 167 |
| RsaNI | GTAC | 1 cut(s) | 166 |
| SalI | GTCGAC | 1 cut(s) | 173 |
| SaqAI | TTAA | 5 cut(s) | 12, 150, 434, 516, 567 |
| SatI | GCNGC | 3 cut(s) | 333, 455, 530 |
| Sau3AI | GATC | 2 cut(s) | 34, 190 |
| Sau96I | GGNCC | 3 cut(s) | 68, 182, 558 |
| ScrFI | CCNGG | 1 cut(s) | 562 |
| SduI | GDGCHC | 1 cut(s) | 353 |
| SinI | GGWCC | 2 cut(s) | 182, 558 |
| SsiI | CCGC | 3 cut(s) | 247, 529, 556 |
| SspI | AATATT | 1 cut(s) | 412 |
| StyD4I | CCNGG | 1 cut(s) | 560 |
| TaiI | ACGT | 2 cut(s) | 174, 348 |
| TaqI | TCGA | 1 cut(s) | 174 |
| TauI | GCSGC | 1 cut(s) | 532 |
| TfiI | GAWTC | 1 cut(s) | 423 |
| Tru1I | TTAA | 5 cut(s) | 12, 150, 434, 516, 567 |
| Tru9I | TTAA | 5 cut(s) | 12, 150, 434, 516, 567 |
| TseI | GCWGC | 2 cut(s) | 332, 454 |
| TspDTI | ATGAA | 3 cut(s) | 386, 521, 549 |
| TspGWI | ACGGA | 1 cut(s) | 131 |
| VpaK11BI | GGWCC | 2 cut(s) | 182, 558 |
| VspI | ATTAAT | 2 cut(s) | 12, 567 |
| XapI | RAATTY | 3 cut(s) | 58, 268, 599 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 176 |
| XmiI | GTMKAC | 1 cut(s) | 174 |