ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 133, 398, 419 |
| AfaI | GTAC | 2 cut(s) | 106, 331 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 234 |
| AgsI | TTSAA | 1 cut(s) | 133 |
| Alw26I | GTCTC | 1 cut(s) | 343 |
| ApoI | RAATTY | 3 cut(s) | 133, 398, 419 |
| AspS9I | GGNCC | 1 cut(s) | 272 |
| AsuHPI | GGTGA | 2 cut(s) | 185, 199 |
| AsuII | TTCGAA | 1 cut(s) | 417 |
| AvaII | GGWCC | 1 cut(s) | 272 |
| BbsI | GAAGAC | 1 cut(s) | 13 |
| BccI | CCATC | 3 cut(s) | 26, 164, 263 |
| BcoDI | GTCTC | 1 cut(s) | 343 |
| BmcAI | AGTACT | 1 cut(s) | 106 |
| Bme18I | GGWCC | 1 cut(s) | 272 |
| BmgT120I | GGNCC | 1 cut(s) | 272 |
| BmrI | ACTGGG | 1 cut(s) | 27 |
| BmsI | GCATC | 1 cut(s) | 349 |
| BmuI | ACTGGG | 1 cut(s) | 27 |
| BpiI | GAAGAC | 1 cut(s) | 13 |
| Bpu14I | TTCGAA | 1 cut(s) | 417 |
| BsaJI | CCNNGG | 1 cut(s) | 275 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 234 |
| Bse1I | ACTGG | 3 cut(s) | 22, 210, 331 |
| BseDI | CCNNGG | 1 cut(s) | 275 |
| BseGI | GGATG | 2 cut(s) | 37, 175 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 234 |
| BseNI | ACTGG | 3 cut(s) | 22, 210, 331 |
| BseRI | GAGGAG | 1 cut(s) | 115 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 234 |
| BsmAI | GTCTC | 1 cut(s) | 343 |
| Bsp119I | TTCGAA | 1 cut(s) | 417 |
| BspT104I | TTCGAA | 1 cut(s) | 417 |
| BsrI | ACTGG | 3 cut(s) | 22, 210, 331 |
| BssECI | CCNNGG | 1 cut(s) | 275 |
| Bst6I | CTCTTC | 1 cut(s) | 235 |
| BstBI | TTCGAA | 1 cut(s) | 417 |
| BstDEI | CTNAG | 2 cut(s) | 41, 426 |
| BstDSI | CCRYGG | 1 cut(s) | 275 |
| BstF5I | GGATG | 2 cut(s) | 37, 175 |
| BstMAI | GTCTC | 1 cut(s) | 343 |
| BstV2I | GAAGAC | 1 cut(s) | 13 |
| BtgI | CCRYGG | 1 cut(s) | 275 |
| BtsCI | GGATG | 2 cut(s) | 37, 175 |
| Cfr13I | GGNCC | 1 cut(s) | 272 |
| Csp6I | GTAC | 2 cut(s) | 105, 330 |
| CviAII | CATG | 2 cut(s) | 124, 234 |
| CviQI | GTAC | 2 cut(s) | 105, 330 |
| DdeI | CTNAG | 2 cut(s) | 41, 426 |
| Eam1104I | CTCTTC | 1 cut(s) | 235 |
| EarI | CTCTTC | 1 cut(s) | 235 |
| Eco47I | GGWCC | 1 cut(s) | 272 |
| EcoRI | GAATTC | 2 cut(s) | 398, 419 |
| EcoT22I | ATGCAT | 1 cut(s) | 364 |
| FaeI | CATG | 2 cut(s) | 127, 237 |
| FaiI | YATR | 8 cut(s) | 29, 97, 125, 155, 215, 235, 267, 396 |
| FatI | CATG | 2 cut(s) | 123, 233 |
| FokI | GGATG | 2 cut(s) | 44, 182 |
| Hin1II | CATG | 2 cut(s) | 127, 237 |
| HinfI | GANTC | 6 cut(s) | 9, 36, 59, 206, 217, 414 |
| HphI | GGTGA | 2 cut(s) | 185, 199 |
| Hpy188I | TCNGA | 1 cut(s) | 319 |
| HpyCH4IV | ACGT | 1 cut(s) | 223 |
| HpyCH4V | TGCA | 1 cut(s) | 362 |
| HpyF3I | CTNAG | 2 cut(s) | 41, 426 |
| HpySE526I | ACGT | 1 cut(s) | 223 |
| Hsp92II | CATG | 2 cut(s) | 127, 237 |
| LpnPI | CCDG | 5 cut(s) | 3, 223, 312, 359, 396 |
| LweI | GCATC | 1 cut(s) | 349 |
| MaeII | ACGT | 1 cut(s) | 223 |
| MaeIII | GTNAC | 3 cut(s) | 157, 187, 243 |
| MboII | GAAGA | 4 cut(s) | 18, 68, 222, 392 |
| MluCI | AATT | 4 cut(s) | 133, 354, 398, 419 |
| MlyI | GAGTC | 2 cut(s) | 3, 215 |
| MnlI | CCTC | 6 cut(s) | 72, 93, 160, 169, 238, 416 |
| Mph1103I | ATGCAT | 1 cut(s) | 364 |
| MseI | TTAA | 1 cut(s) | 297 |
| NlaIII | CATG | 2 cut(s) | 127, 237 |
| NmuCI | GTSAC | 1 cut(s) | 187 |
| NsiI | ATGCAT | 1 cut(s) | 364 |
| NspV | TTCGAA | 1 cut(s) | 417 |
| PfeI | GAWTC | 4 cut(s) | 36, 59, 217, 414 |
| PleI | GAGTC | 2 cut(s) | 3, 214 |
| PpsI | GAGTC | 2 cut(s) | 3, 214 |
| PspPI | GGNCC | 1 cut(s) | 272 |
| RsaI | GTAC | 2 cut(s) | 106, 331 |
| RsaNI | GTAC | 2 cut(s) | 105, 330 |
| SaqAI | TTAA | 1 cut(s) | 297 |
| Sau96I | GGNCC | 1 cut(s) | 272 |
| ScaI | AGTACT | 1 cut(s) | 106 |
| SchI | GAGTC | 2 cut(s) | 3, 215 |
| SetI | ASST | 2 cut(s) | 180, 226 |
| SfaNI | GCATC | 1 cut(s) | 349 |
| SfuI | TTCGAA | 1 cut(s) | 417 |
| SinI | GGWCC | 1 cut(s) | 272 |
| Sse9I | AATT | 4 cut(s) | 133, 354, 398, 419 |
| TaiI | ACGT | 1 cut(s) | 226 |
| TaqI | TCGA | 2 cut(s) | 77, 417 |
| TasI | AATT | 4 cut(s) | 133, 354, 398, 419 |
| TatI | WGTACW | 1 cut(s) | 104 |
| TfiI | GAWTC | 4 cut(s) | 36, 59, 217, 414 |
| Tru1I | TTAA | 1 cut(s) | 297 |
| Tru9I | TTAA | 1 cut(s) | 297 |
| TseFI | GTSAC | 1 cut(s) | 187 |
| Tsp45I | GTSAC | 1 cut(s) | 187 |
| TspDTI | ATGAA | 5 cut(s) | 112, 222, 230, 329, 411 |
| TspGWI | ACGGA | 2 cut(s) | 262, 264 |
| VpaK11BI | GGWCC | 1 cut(s) | 272 |
| XapI | RAATTY | 3 cut(s) | 133, 398, 419 |
| ZrmI | AGTACT | 1 cut(s) | 106 |
| Zsp2I | ATGCAT | 1 cut(s) | 364 |