Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 321 |
| AciI | CCGC | 5 cut(s) | 218, 221, 226, 244, 250 |
| AcvI | CACGTG | 1 cut(s) | 72 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 256 |
| AflIII | ACRYGT | 1 cut(s) | 69 |
| AluBI | AGCT | 1 cut(s) | 53 |
| AluI | AGCT | 1 cut(s) | 53 |
| Alw21I | GWGCWC | 1 cut(s) | 274 |
| Alw26I | GTCTC | 1 cut(s) | 226 |
| ApeKI | GCWGC | 2 cut(s) | 53, 223 |
| AsuC2I | CCSGG | 1 cut(s) | 84 |
| AsuHPI | GGTGA | 2 cut(s) | 111, 169 |
| BbrPI | CACGTG | 1 cut(s) | 72 |
| Bbv12I | GWGCWC | 1 cut(s) | 274 |
| BbvI | GCAGC | 2 cut(s) | 40, 235 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 155, 189 |
| BclI | TGATCA | 1 cut(s) | 181 |
| BcnI | CCSGG | 1 cut(s) | 84 |
| BcoDI | GTCTC | 1 cut(s) | 226 |
| BfaI | CTAG | 2 cut(s) | 150, 171 |
| BisI | GCNGC | 4 cut(s) | 54, 218, 221, 224 |
| BlsI | GCNGC | 4 cut(s) | 55, 219, 222, 225 |
| Bme1390I | CCNGG | 1 cut(s) | 84 |
| BmiI | GGNNCC | 2 cut(s) | 248, 329 |
| BmrFI | CCNGG | 1 cut(s) | 84 |
| BmsI | GCATC | 1 cut(s) | 96 |
| BpmI | CTGGAG | 1 cut(s) | 221 |
| BpuMI | CCSGG | 1 cut(s) | 84 |
| BsaAI | YACGTR | 1 cut(s) | 72 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 256 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 256 |
| BseXI | GCAGC | 2 cut(s) | 40, 235 |
| BsiHKAI | GWGCWC | 1 cut(s) | 274 |
| BsiSI | CCGG | 1 cut(s) | 84 |
| BslFI | GGGAC | 1 cut(s) | 66 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 256 |
| BsmAI | GTCTC | 1 cut(s) | 226 |
| BsmBI | CGTCTC | 1 cut(s) | 226 |
| BsmFI | GGGAC | 1 cut(s) | 66 |
| BsmI | GAATGC | 1 cut(s) | 8 |
| Bsp1286I | GDGCHC | 1 cut(s) | 274 |
| Bsp143I | GATC | 1 cut(s) | 181 |
| BspACI | CCGC | 5 cut(s) | 218, 221, 226, 244, 250 |
| BspHI | TCATGA | 1 cut(s) | 274 |
| BspLI | GGNNCC | 2 cut(s) | 248, 329 |
| BssMI | GATC | 1 cut(s) | 181 |
| Bst4CI | ACNGT | 1 cut(s) | 32 |
| BstBAI | YACGTR | 1 cut(s) | 72 |
| BstKTI | GATC | 1 cut(s) | 184 |
| BstMAI | GTCTC | 1 cut(s) | 226 |
| BstMBI | GATC | 1 cut(s) | 181 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 84, 223 |
| BstSCI | CCNGG | 1 cut(s) | 82 |
| BstV1I | GCAGC | 2 cut(s) | 40, 235 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 199 |
| CciI | TCATGA | 1 cut(s) | 274 |
| CviAII | CATG | 4 cut(s) | 46, 126, 185, 275 |
| CviJI | RGCY | 2 cut(s) | 53, 217 |
| CviKI_1 | RGCY | 2 cut(s) | 53, 217 |
| DpnI | GATC | 1 cut(s) | 183 |
| DpnII | GATC | 1 cut(s) | 181 |
| Eco72I | CACGTG | 1 cut(s) | 72 |
| Esp3I | CGTCTC | 1 cut(s) | 226 |
| FaeI | CATG | 4 cut(s) | 49, 129, 188, 278 |
| FaiI | YATR | 7 cut(s) | 47, 127, 186, 276, 307, 321, 335 |
| FaqI | GGGAC | 1 cut(s) | 66 |
| FatI | CATG | 4 cut(s) | 45, 125, 184, 274 |
| FauI | CCCGC | 1 cut(s) | 219 |
| FbaI | TGATCA | 1 cut(s) | 181 |
| Fnu4HI | GCNGC | 4 cut(s) | 54, 218, 221, 224 |
| Fsp4HI | GCNGC | 4 cut(s) | 54, 218, 221, 224 |
| FspBI | CTAG | 2 cut(s) | 150, 171 |
| GluI | GCNGC | 4 cut(s) | 54, 218, 221, 224 |
| GsuI | CTGGAG | 1 cut(s) | 221 |
| HapII | CCGG | 1 cut(s) | 84 |
| Hin1II | CATG | 4 cut(s) | 49, 129, 188, 278 |
| HinfI | GANTC | 1 cut(s) | 314 |
| HpaII | CCGG | 1 cut(s) | 84 |
| HphI | GGTGA | 2 cut(s) | 111, 169 |
| Hpy166II | GTNNAC | 2 cut(s) | 119, 160 |
| Hpy188I | TCNGA | 2 cut(s) | 28, 181 |
| Hpy188III | TCNNGA | 3 cut(s) | 200, 212, 275 |
| Hpy8I | GTNNAC | 2 cut(s) | 119, 160 |
| HpyAV | CCTTC | 3 cut(s) | 234, 272, 286 |
| HpyCH4III | ACNGT | 1 cut(s) | 32 |
| HpyCH4IV | ACGT | 1 cut(s) | 71 |
| HpyCH4V | TGCA | 1 cut(s) | 166 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 84, 223 |
| HpySE526I | ACGT | 1 cut(s) | 71 |
| Hsp92II | CATG | 4 cut(s) | 49, 129, 188, 278 |
| Ksp22I | TGATCA | 1 cut(s) | 181 |
| Kzo9I | GATC | 1 cut(s) | 181 |
| LmnI | GCTCC | 2 cut(s) | 50, 75 |
| LpnPI | CCDG | 4 cut(s) | 42, 97, 135, 185 |
| Lsp1109I | GCAGC | 2 cut(s) | 40, 235 |
| LweI | GCATC | 1 cut(s) | 96 |
| MaeI | CTAG | 2 cut(s) | 150, 171 |
| MaeII | ACGT | 1 cut(s) | 71 |
| MaeIII | GTNAC | 1 cut(s) | 32 |
| MalI | GATC | 1 cut(s) | 183 |
| MboI | GATC | 1 cut(s) | 181 |
| MboII | GAAGA | 2 cut(s) | 188, 249 |
| MhlI | GDGCHC | 1 cut(s) | 274 |
| MlyI | GAGTC | 1 cut(s) | 323 |
| MmeI | TCCRAC | 2 cut(s) | 6, 37 |
| MnlI | CCTC | 5 cut(s) | 34, 123, 196, 250, 292 |
| MslI | CAYNNNNRTG | 1 cut(s) | 124 |
| MspA1I | CMGCKG | 1 cut(s) | 226 |
| MspI | CCGG | 1 cut(s) | 84 |
| MspR9I | CCNGG | 1 cut(s) | 84 |
| Mva1269I | GAATGC | 1 cut(s) | 8 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 84, 223 |
| NciI | CCSGG | 1 cut(s) | 84 |
| NdeII | GATC | 1 cut(s) | 181 |
| NlaIII | CATG | 4 cut(s) | 49, 129, 188, 278 |
| NlaIV | GGNNCC | 2 cut(s) | 248, 329 |
| PagI | TCATGA | 1 cut(s) | 274 |
| PctI | GAATGC | 1 cut(s) | 8 |
| PkrI | GCNGC | 4 cut(s) | 55, 219, 222, 225 |
| PleI | GAGTC | 1 cut(s) | 322 |
| PmaCI | CACGTG | 1 cut(s) | 72 |
| PmlI | CACGTG | 1 cut(s) | 72 |
| PpsI | GAGTC | 1 cut(s) | 322 |
| Ppu21I | YACGTR | 1 cut(s) | 72 |
| PsiI | TTATAA | 1 cut(s) | 321 |
| PspCI | CACGTG | 1 cut(s) | 72 |
| PspN4I | GGNNCC | 2 cut(s) | 248, 329 |
| RseI | CAYNNNNRTG | 1 cut(s) | 124 |
| SatI | GCNGC | 4 cut(s) | 54, 218, 221, 224 |
| Sau3AI | GATC | 1 cut(s) | 181 |
| SchI | GAGTC | 1 cut(s) | 323 |
| ScrFI | CCNGG | 1 cut(s) | 84 |
| SduI | GDGCHC | 1 cut(s) | 274 |
| SetI | ASST | 5 cut(s) | 55, 74, 207, 283, 297 |
| SfaNI | GCATC | 1 cut(s) | 96 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 124 |
| SsiI | CCGC | 5 cut(s) | 218, 221, 226, 244, 250 |
| SspMI | CTAG | 2 cut(s) | 150, 171 |
| StyD4I | CCNGG | 1 cut(s) | 82 |
| TaaI | ACNGT | 1 cut(s) | 32 |
| TaiI | ACGT | 1 cut(s) | 74 |
| TauI | GCSGC | 2 cut(s) | 220, 223 |
| TseI | GCWGC | 2 cut(s) | 53, 223 |
| TspDTI | ATGAA | 1 cut(s) | 291 |
| XspI | CTAG | 2 cut(s) | 150, 171 |