ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 163 |
| AcsI | RAATTY | 2 cut(s) | 235, 281 |
| AfeI | AGCGCT | 1 cut(s) | 227 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 163 |
| AgsI | TTSAA | 3 cut(s) | 11, 278, 403 |
| AluBI | AGCT | 5 cut(s) | 17, 59, 122, 217, 422 |
| AluI | AGCT | 5 cut(s) | 17, 59, 122, 217, 422 |
| Alw21I | GWGCWC | 1 cut(s) | 61 |
| Alw26I | GTCTC | 1 cut(s) | 76 |
| Aor51HI | AGCGCT | 1 cut(s) | 227 |
| ApoI | RAATTY | 2 cut(s) | 235, 281 |
| AseI | ATTAAT | 1 cut(s) | 21 |
| AspLEI | GCGC | 1 cut(s) | 228 |
| AsuHPI | GGTGA | 1 cut(s) | 233 |
| BanII | GRGCYC | 1 cut(s) | 61 |
| Bbv12I | GWGCWC | 1 cut(s) | 61 |
| BclI | TGATCA | 1 cut(s) | 193 |
| BcoDI | GTCTC | 1 cut(s) | 76 |
| BfoI | RGCGCY | 1 cut(s) | 229 |
| Bpu10I | CCTNAGC | 1 cut(s) | 229 |
| BpuEI | CTTGAG | 1 cut(s) | 166 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 163 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BseMII | CTCAG | 2 cut(s) | 74, 243 |
| BsiHKAI | GWGCWC | 1 cut(s) | 61 |
| BslFI | GGGAC | 2 cut(s) | 86, 344 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BsmAI | GTCTC | 1 cut(s) | 76 |
| BsmFI | GGGAC | 2 cut(s) | 86, 344 |
| Bsp1286I | GDGCHC | 1 cut(s) | 61 |
| Bsp143I | GATC | 4 cut(s) | 115, 193, 376, 439 |
| BspCNI | CTCAG | 2 cut(s) | 73, 242 |
| BssMI | GATC | 4 cut(s) | 115, 193, 376, 439 |
| Bst4CI | ACNGT | 1 cut(s) | 335 |
| Bst6I | CTCTTC | 2 cut(s) | 87, 316 |
| BstC8I | GCNNGC | 1 cut(s) | 139 |
| BstDEI | CTNAG | 2 cut(s) | 60, 229 |
| BstH2I | RGCGCY | 1 cut(s) | 229 |
| BstHHI | GCGC | 1 cut(s) | 228 |
| BstKTI | GATC | 4 cut(s) | 118, 196, 379, 442 |
| BstMAI | GTCTC | 1 cut(s) | 76 |
| BstMBI | GATC | 4 cut(s) | 115, 193, 376, 439 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 23, 223 |
| BtsIMutI | CAGTG | 1 cut(s) | 340 |
| Cac8I | GCNNGC | 1 cut(s) | 139 |
| CfoI | GCGC | 1 cut(s) | 228 |
| CviAII | CATG | 1 cut(s) | 158 |
| CviJI | RGCY | 6 cut(s) | 17, 59, 122, 137, 217, 422 |
| CviKI_1 | RGCY | 6 cut(s) | 17, 59, 122, 137, 217, 422 |
| DdeI | CTNAG | 2 cut(s) | 60, 229 |
| DpnI | GATC | 4 cut(s) | 117, 195, 378, 441 |
| DpnII | GATC | 4 cut(s) | 115, 193, 376, 439 |
| Eam1104I | CTCTTC | 2 cut(s) | 87, 316 |
| EarI | CTCTTC | 2 cut(s) | 87, 316 |
| Ecl136II | GAGCTC | 1 cut(s) | 59 |
| Eco24I | GRGCYC | 1 cut(s) | 61 |
| Eco47III | AGCGCT | 1 cut(s) | 227 |
| Eco53kI | GAGCTC | 1 cut(s) | 59 |
| EcoICRI | GAGCTC | 1 cut(s) | 59 |
| EcoT38I | GRGCYC | 1 cut(s) | 61 |
| FaeI | CATG | 1 cut(s) | 161 |
| FaiI | YATR | 5 cut(s) | 128, 159, 241, 444, 446 |
| FaqI | GGGAC | 2 cut(s) | 86, 344 |
| FatI | CATG | 1 cut(s) | 157 |
| FauNDI | CATATG | 1 cut(s) | 444 |
| FbaI | TGATCA | 1 cut(s) | 193 |
| FriOI | GRGCYC | 1 cut(s) | 61 |
| GlaI | GCGC | 1 cut(s) | 227 |
| HaeII | RGCGCY | 1 cut(s) | 229 |
| HhaI | GCGC | 1 cut(s) | 228 |
| Hin1II | CATG | 1 cut(s) | 161 |
| Hin6I | GCGC | 1 cut(s) | 226 |
| HinP1I | GCGC | 1 cut(s) | 226 |
| HinfI | GANTC | 1 cut(s) | 345 |
| HphI | GGTGA | 1 cut(s) | 233 |
| Hpy166II | GTNNAC | 1 cut(s) | 66 |
| Hpy188I | TCNGA | 2 cut(s) | 193, 292 |
| Hpy188III | TCNNGA | 3 cut(s) | 11, 183, 231 |
| Hpy8I | GTNNAC | 1 cut(s) | 66 |
| HpyAV | CCTTC | 1 cut(s) | 214 |
| HpyCH4III | ACNGT | 1 cut(s) | 335 |
| HpyCH4V | TGCA | 2 cut(s) | 103, 371 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 23, 223 |
| HpyF3I | CTNAG | 2 cut(s) | 60, 229 |
| Hsp92II | CATG | 1 cut(s) | 161 |
| HspAI | GCGC | 1 cut(s) | 226 |
| Ksp22I | TGATCA | 1 cut(s) | 193 |
| Kzo9I | GATC | 4 cut(s) | 115, 193, 376, 439 |
| LmnI | GCTCC | 1 cut(s) | 56 |
| LpnPI | CCDG | 3 cut(s) | 40, 216, 229 |
| MalI | GATC | 4 cut(s) | 117, 195, 378, 441 |
| MboI | GATC | 4 cut(s) | 115, 193, 376, 439 |
| MboII | GAAGA | 4 cut(s) | 104, 290, 320, 333 |
| MfeI | CAATTG | 1 cut(s) | 398 |
| MhlI | GDGCHC | 1 cut(s) | 61 |
| MluCI | AATT | 7 cut(s) | 111, 235, 281, 296, 315, 398, 431 |
| MmeI | TCCRAC | 1 cut(s) | 440 |
| MnlI | CCTC | 4 cut(s) | 30, 127, 190, 335 |
| MseI | TTAA | 3 cut(s) | 21, 144, 153 |
| MslI | CAYNNNNRTG | 1 cut(s) | 353 |
| MunI | CAATTG | 1 cut(s) | 398 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 23, 223 |
| NdeI | CATATG | 1 cut(s) | 444 |
| NdeII | GATC | 4 cut(s) | 115, 193, 376, 439 |
| NlaIII | CATG | 1 cut(s) | 161 |
| PfeI | GAWTC | 1 cut(s) | 345 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 163 |
| PshBI | ATTAAT | 1 cut(s) | 21 |
| Psp124BI | GAGCTC | 1 cut(s) | 61 |
| RseI | CAYNNNNRTG | 1 cut(s) | 353 |
| SacI | GAGCTC | 1 cut(s) | 61 |
| SaqAI | TTAA | 3 cut(s) | 21, 144, 153 |
| Sau3AI | GATC | 4 cut(s) | 115, 193, 376, 439 |
| SduI | GDGCHC | 1 cut(s) | 61 |
| SetI | ASST | 6 cut(s) | 19, 61, 124, 219, 269, 424 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 353 |
| SmlI | CTYRAG | 1 cut(s) | 181 |
| SmoI | CTYRAG | 1 cut(s) | 181 |
| Sse9I | AATT | 7 cut(s) | 111, 235, 281, 296, 315, 398, 431 |
| SstI | GAGCTC | 1 cut(s) | 61 |
| TaaI | ACNGT | 1 cut(s) | 335 |
| TaqI | TCGA | 1 cut(s) | 118 |
| TasI | AATT | 7 cut(s) | 111, 235, 281, 296, 315, 398, 431 |
| TfiI | GAWTC | 1 cut(s) | 345 |
| Tru1I | TTAA | 3 cut(s) | 21, 144, 153 |
| Tru9I | TTAA | 3 cut(s) | 21, 144, 153 |
| TscAI | CASTG | 1 cut(s) | 340 |
| TspDTI | ATGAA | 2 cut(s) | 143, 196 |
| TspRI | CASTG | 1 cut(s) | 340 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 163 |
| VspI | ATTAAT | 1 cut(s) | 21 |
| XapI | RAATTY | 2 cut(s) | 235, 281 |