ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 32 |
| AccI | GTMKAC | 1 cut(s) | 824 |
| AciI | CCGC | 4 cut(s) | 167, 299, 511, 874 |
| AclWI | GGATC | 2 cut(s) | 378, 941 |
| AcsI | RAATTY | 4 cut(s) | 350, 528, 541, 1032 |
| AcuI | CTGAAG | 1 cut(s) | 695 |
| AfaI | GTAC | 2 cut(s) | 505, 553 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 590, 877 |
| AflIII | ACRYGT | 1 cut(s) | 769 |
| AgsI | TTSAA | 7 cut(s) | 211, 470, 524, 619, 649, 671, 701 |
| AjnI | CCWGG | 2 cut(s) | 366, 740 |
| AluBI | AGCT | 4 cut(s) | 643, 709, 830, 863 |
| AluI | AGCT | 4 cut(s) | 643, 709, 830, 863 |
| Alw26I | GTCTC | 2 cut(s) | 808, 958 |
| AlwI | GGATC | 2 cut(s) | 378, 941 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 610, 643 |
| Ama87I | CYCGRG | 1 cut(s) | 225 |
| AoxI | GGCC | 1 cut(s) | 244 |
| ApeKI | GCWGC | 8 cut(s) | 119, 296, 375, 578, 601, 604, 637, 640 |
| ApoI | RAATTY | 4 cut(s) | 350, 528, 541, 1032 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 133, 165 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 404, 1035 |
| AspLEI | GCGC | 1 cut(s) | 33 |
| AspS9I | GGNCC | 3 cut(s) | 245, 342, 939 |
| AsuHPI | GGTGA | 4 cut(s) | 33, 38, 860, 1052 |
| AvaI | CYCGRG | 1 cut(s) | 225 |
| AvaII | GGWCC | 2 cut(s) | 342, 939 |
| BauI | CACGAG | 1 cut(s) | 474 |
| BbvI | GCAGC | 8 cut(s) | 106, 283, 362, 565, 588, 616, 649, 652 |
| BceAI | ACGGC | 1 cut(s) | 340 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 412, 446 |
| BciT130I | CCWGG | 2 cut(s) | 368, 742 |
| BclI | TGATCA | 1 cut(s) | 153 |
| BcoDI | GTCTC | 2 cut(s) | 808, 958 |
| BfaI | CTAG | 1 cut(s) | 164 |
| BfmI | CTRYAG | 1 cut(s) | 602 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 167 |
| BglII | AGATCT | 1 cut(s) | 174 |
| BisI | GCNGC | 9 cut(s) | 120, 168, 297, 376, 579, 602, 605, 638, 641 |
| BlsI | GCNGC | 9 cut(s) | 121, 169, 298, 377, 580, 603, 606, 639, 642 |
| Bme1390I | CCNGG | 2 cut(s) | 368, 742 |
| Bme18I | GGWCC | 2 cut(s) | 342, 939 |
| BmeT110I | CYCGRG | 1 cut(s) | 225 |
| BmgT120I | GGNCC | 3 cut(s) | 245, 342, 939 |
| BmrFI | CCNGG | 2 cut(s) | 368, 742 |
| BmrI | ACTGGG | 4 cut(s) | 111, 583, 620, 642 |
| BmsI | GCATC | 2 cut(s) | 46, 266 |
| BmuI | ACTGGG | 4 cut(s) | 111, 583, 620, 642 |
| BoxI | GACNNNNGTC | 1 cut(s) | 820 |
| BpmI | CTGGAG | 1 cut(s) | 832 |
| BsaBI | GATNNNNATC | 2 cut(s) | 447, 453 |
| BsaJI | CCNNGG | 2 cut(s) | 188, 740 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 590, 877 |
| Bse1I | ACTGG | 6 cut(s) | 106, 578, 615, 637, 815, 978 |
| Bse3DI | GCAATG | 1 cut(s) | 554 |
| Bse8I | GATNNNNATC | 2 cut(s) | 447, 453 |
| BseBI | CCWGG | 2 cut(s) | 368, 742 |
| BseDI | CCNNGG | 2 cut(s) | 188, 740 |
| BseGI | GGATG | 1 cut(s) | 561 |
| BseJI | GATNNNNATC | 2 cut(s) | 447, 453 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 590, 877 |
| BseMI | GCAATG | 1 cut(s) | 554 |
| BseMII | CTCAG | 2 cut(s) | 873, 993 |
| BseNI | ACTGG | 6 cut(s) | 106, 578, 615, 637, 815, 978 |
| BseRI | GAGGAG | 1 cut(s) | 240 |
| BseXI | GCAGC | 8 cut(s) | 106, 283, 362, 565, 588, 616, 649, 652 |
| BshFI | GGCC | 1 cut(s) | 246 |
| BsiHKCI | CYCGRG | 1 cut(s) | 225 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 590, 877 |
| BsmAI | GTCTC | 2 cut(s) | 808, 958 |
| BsnI | GGCC | 1 cut(s) | 246 |
| BsoBI | CYCGRG | 1 cut(s) | 225 |
| Bsp1407I | TGTACA | 1 cut(s) | 551 |
| Bsp143I | GATC | 8 cut(s) | 25, 63, 153, 174, 370, 448, 850, 946 |
| Bsp19I | CCATGG | 1 cut(s) | 188 |
| BspACI | CCGC | 4 cut(s) | 167, 299, 511, 874 |
| BspANI | GGCC | 1 cut(s) | 246 |
| BspCNI | CTCAG | 2 cut(s) | 872, 994 |
| BspHI | TCATGA | 2 cut(s) | 720, 1069 |
| BspMAI | CTGCAG | 1 cut(s) | 606 |
| BspPI | GGATC | 2 cut(s) | 378, 941 |
| BsrDI | GCAATG | 1 cut(s) | 554 |
| BsrGI | TGTACA | 1 cut(s) | 551 |
| BsrI | ACTGG | 6 cut(s) | 106, 578, 615, 637, 815, 978 |
| BssECI | CCNNGG | 2 cut(s) | 188, 740 |
| BssMI | GATC | 8 cut(s) | 25, 63, 153, 174, 370, 448, 850, 946 |
| BssSI | CACGAG | 1 cut(s) | 474 |
| BssT1I | CCWWGG | 1 cut(s) | 188 |
| Bst2BI | CACGAG | 1 cut(s) | 474 |
| Bst2UI | CCWGG | 2 cut(s) | 368, 742 |
| Bst4CI | ACNGT | 1 cut(s) | 276 |
| Bst6I | CTCTTC | 1 cut(s) | 410 |
| BstAUI | TGTACA | 1 cut(s) | 551 |
| BstC8I | GCNNGC | 2 cut(s) | 707, 931 |
| BstDEI | CTNAG | 4 cut(s) | 36, 413, 859, 1002 |
| BstDSI | CCRYGG | 1 cut(s) | 188 |
| BstF5I | GGATG | 1 cut(s) | 561 |
| BstHHI | GCGC | 1 cut(s) | 33 |
| BstKTI | GATC | 8 cut(s) | 28, 66, 156, 177, 373, 451, 853, 949 |
| BstMAI | GTCTC | 2 cut(s) | 808, 958 |
| BstMBI | GATC | 8 cut(s) | 25, 63, 153, 174, 370, 448, 850, 946 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 167, 269, 372 |
| BstNI | CCWGG | 2 cut(s) | 368, 742 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 820 |
| BstSCI | CCNGG | 2 cut(s) | 366, 740 |
| BstSFI | CTRYAG | 1 cut(s) | 602 |
| BstV1I | GCAGC | 8 cut(s) | 106, 283, 362, 565, 588, 616, 649, 652 |
| BstX2I | RGATCY | 1 cut(s) | 174 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 632 |
| BstYI | RGATCY | 1 cut(s) | 174 |
| BsuRI | GGCC | 1 cut(s) | 246 |
| BtgI | CCRYGG | 1 cut(s) | 188 |
| BtsCI | GGATG | 1 cut(s) | 561 |
| BtsIMutI | CAGTG | 2 cut(s) | 99, 272 |
| Cac8I | GCNNGC | 2 cut(s) | 707, 931 |
| CaiI | CAGNNNCTG | 2 cut(s) | 610, 643 |
| CciI | TCATGA | 2 cut(s) | 720, 1069 |
| CfoI | GCGC | 1 cut(s) | 33 |
| Cfr13I | GGNCC | 3 cut(s) | 245, 342, 939 |
| Csp6I | GTAC | 2 cut(s) | 504, 552 |
| CviQI | GTAC | 2 cut(s) | 504, 552 |
| DdeI | CTNAG | 4 cut(s) | 36, 413, 859, 1002 |
| DpnI | GATC | 8 cut(s) | 27, 65, 155, 176, 372, 450, 852, 948 |
| DpnII | GATC | 8 cut(s) | 25, 63, 153, 174, 370, 448, 850, 946 |
| Eam1104I | CTCTTC | 1 cut(s) | 410 |
| EarI | CTCTTC | 1 cut(s) | 410 |
| Eco130I | CCWWGG | 1 cut(s) | 188 |
| Eco32I | GATATC | 2 cut(s) | 559, 718 |
| Eco47I | GGWCC | 2 cut(s) | 342, 939 |
| Eco57I | CTGAAG | 1 cut(s) | 695 |
| Eco88I | CYCGRG | 1 cut(s) | 225 |
| EcoO109I | RGGNCCY | 1 cut(s) | 245 |
| EcoRII | CCWGG | 2 cut(s) | 366, 740 |
| EcoRV | GATATC | 2 cut(s) | 559, 718 |
| EcoT14I | CCWWGG | 1 cut(s) | 188 |
| EcoT22I | ATGCAT | 1 cut(s) | 259 |
| ErhI | CCWWGG | 1 cut(s) | 188 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 693, 725 |
| FauI | CCCGC | 1 cut(s) | 292 |
| FbaI | TGATCA | 1 cut(s) | 153 |
| FblI | GTMKAC | 1 cut(s) | 824 |
| Fnu4HI | GCNGC | 9 cut(s) | 120, 168, 297, 376, 579, 602, 605, 638, 641 |
| FokI | GGATG | 1 cut(s) | 548 |
| Fsp4HI | GCNGC | 9 cut(s) | 120, 168, 297, 376, 579, 602, 605, 638, 641 |
| FspBI | CTAG | 1 cut(s) | 164 |
| FspI | TGCGCA | 1 cut(s) | 32 |
| GlaI | GCGC | 1 cut(s) | 32 |
| GluI | GCNGC | 9 cut(s) | 120, 168, 297, 376, 579, 602, 605, 638, 641 |
| GsuI | CTGGAG | 1 cut(s) | 832 |
| HaeIII | GGCC | 1 cut(s) | 246 |
| HhaI | GCGC | 1 cut(s) | 33 |
| Hin6I | GCGC | 1 cut(s) | 31 |
| HinP1I | GCGC | 1 cut(s) | 31 |
| HincII | GTYRAC | 2 cut(s) | 785, 825 |
| HindII | GTYRAC | 2 cut(s) | 785, 825 |
| HindIII | AAGCTT | 1 cut(s) | 707 |
| HinfI | GANTC | 6 cut(s) | 96, 223, 400, 443, 697, 781 |
| HphI | GGTGA | 4 cut(s) | 33, 38, 860, 1052 |
| Hpy166II | GTNNAC | 2 cut(s) | 785, 825 |
| Hpy188I | TCNGA | 6 cut(s) | 68, 306, 442, 448, 1003, 1030 |
| Hpy188III | TCNNGA | 6 cut(s) | 220, 227, 240, 713, 721, 1070 |
| Hpy8I | GTNNAC | 2 cut(s) | 785, 825 |
| Hpy99I | CGWCG | 1 cut(s) | 678 |
| HpyAV | CCTTC | 1 cut(s) | 447 |
| HpyCH4III | ACNGT | 1 cut(s) | 276 |
| HpyCH4IV | ACGT | 2 cut(s) | 673, 771 |
| HpyCH4V | TGCA | 6 cut(s) | 59, 122, 257, 604, 794, 919 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 167, 269, 372 |
| HpyF3I | CTNAG | 4 cut(s) | 36, 413, 859, 1002 |
| HpySE526I | ACGT | 2 cut(s) | 673, 771 |
| HspAI | GCGC | 1 cut(s) | 31 |
| Ksp22I | TGATCA | 1 cut(s) | 153 |
| Kzo9I | GATC | 8 cut(s) | 25, 63, 153, 174, 370, 448, 850, 946 |
| LmnI | GCTCC | 3 cut(s) | 6, 268, 586 |
| Lsp1109I | GCAGC | 8 cut(s) | 106, 283, 362, 565, 588, 616, 649, 652 |
| LweI | GCATC | 2 cut(s) | 46, 266 |
| MaeI | CTAG | 1 cut(s) | 164 |
| MaeII | ACGT | 2 cut(s) | 673, 771 |
| MaeIII | GTNAC | 4 cut(s) | 39, 281, 317, 1058 |
| MalI | GATC | 8 cut(s) | 27, 65, 155, 176, 372, 450, 852, 948 |
| MboI | GATC | 8 cut(s) | 25, 63, 153, 174, 370, 448, 850, 946 |
| MboII | GAAGA | 5 cut(s) | 397, 536, 723, 726, 764 |
| MflI | RGATCY | 1 cut(s) | 174 |
| MluCI | AATT | 6 cut(s) | 72, 350, 487, 528, 541, 1032 |
| MlyI | GAGTC | 2 cut(s) | 217, 790 |
| MmeI | TCCRAC | 2 cut(s) | 369, 589 |
| Mph1103I | ATGCAT | 1 cut(s) | 259 |
| MroXI | GAANNNNTTC | 2 cut(s) | 404, 1035 |
| MseI | TTAA | 2 cut(s) | 839, 909 |
| MslI | CAYNNNNRTG | 3 cut(s) | 54, 1049, 1068 |
| MspA1I | CMGCKG | 1 cut(s) | 643 |
| MspR9I | CCNGG | 2 cut(s) | 368, 742 |
| MvaI | CCWGG | 2 cut(s) | 368, 742 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 167, 269, 372 |
| NcoI | CCATGG | 1 cut(s) | 188 |
| NdeII | GATC | 8 cut(s) | 25, 63, 153, 174, 370, 448, 850, 946 |
| NmuCI | GTSAC | 2 cut(s) | 39, 1058 |
| NsbI | TGCGCA | 1 cut(s) | 32 |
| NsiI | ATGCAT | 1 cut(s) | 259 |
| PaeR7I | CTCGAG | 1 cut(s) | 225 |
| PagI | TCATGA | 2 cut(s) | 720, 1069 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 481 |
| PdmI | GAANNNNTTC | 2 cut(s) | 404, 1035 |
| PfeI | GAWTC | 4 cut(s) | 96, 400, 443, 697 |
| PkrI | GCNGC | 9 cut(s) | 121, 169, 298, 377, 580, 603, 606, 639, 642 |
| PleI | GAGTC | 2 cut(s) | 217, 789 |
| PpsI | GAGTC | 2 cut(s) | 217, 789 |
| PshAI | GACNNNNGTC | 1 cut(s) | 820 |
| Psp6I | CCWGG | 2 cut(s) | 366, 740 |
| PspGI | CCWGG | 2 cut(s) | 366, 740 |
| PspPI | GGNCC | 3 cut(s) | 245, 342, 939 |
| PstI | CTGCAG | 1 cut(s) | 606 |
| PstNI | CAGNNNCTG | 2 cut(s) | 610, 643 |
| PsuI | RGATCY | 1 cut(s) | 174 |
| PvuII | CAGCTG | 1 cut(s) | 643 |
| RsaI | GTAC | 2 cut(s) | 505, 553 |
| RsaNI | GTAC | 2 cut(s) | 504, 552 |
| RseI | CAYNNNNRTG | 3 cut(s) | 54, 1049, 1068 |
| SalI | GTCGAC | 1 cut(s) | 823 |
| SaqAI | TTAA | 2 cut(s) | 839, 909 |
| SatI | GCNGC | 9 cut(s) | 120, 168, 297, 376, 579, 602, 605, 638, 641 |
| Sau3AI | GATC | 8 cut(s) | 25, 63, 153, 174, 370, 448, 850, 946 |
| Sau96I | GGNCC | 3 cut(s) | 245, 342, 939 |
| SchI | GAGTC | 2 cut(s) | 217, 790 |
| ScrFI | CCNGG | 2 cut(s) | 368, 742 |
| SetI | ASST | 9 cut(s) | 46, 521, 645, 676, 711, 774, 824, 832, 865 |
| SfaNI | GCATC | 2 cut(s) | 46, 266 |
| SfcI | CTRYAG | 1 cut(s) | 602 |
| Sfr274I | CTCGAG | 1 cut(s) | 225 |
| SinI | GGWCC | 2 cut(s) | 342, 939 |
| SlaI | CTCGAG | 1 cut(s) | 225 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 54, 1049, 1068 |
| SmlI | CTYRAG | 1 cut(s) | 225 |
| SmoI | CTYRAG | 1 cut(s) | 225 |
| Sse9I | AATT | 6 cut(s) | 72, 350, 487, 528, 541, 1032 |
| SsiI | CCGC | 4 cut(s) | 167, 299, 511, 874 |
| SspMI | CTAG | 1 cut(s) | 164 |
| StyD4I | CCNGG | 2 cut(s) | 366, 740 |
| StyI | CCWWGG | 1 cut(s) | 188 |
| TaaI | ACNGT | 1 cut(s) | 276 |
| TaiI | ACGT | 2 cut(s) | 676, 774 |
| TaqI | TCGA | 4 cut(s) | 226, 824, 853, 1039 |
| TasI | AATT | 6 cut(s) | 72, 350, 487, 528, 541, 1032 |
| TatI | WGTACW | 2 cut(s) | 503, 551 |
| TauI | GCSGC | 1 cut(s) | 170 |
| TfiI | GAWTC | 4 cut(s) | 96, 400, 443, 697 |
| Tru1I | TTAA | 2 cut(s) | 839, 909 |
| Tru9I | TTAA | 2 cut(s) | 839, 909 |
| TscAI | CASTG | 2 cut(s) | 106, 279 |
| TseFI | GTSAC | 2 cut(s) | 39, 1058 |
| TseI | GCWGC | 8 cut(s) | 119, 296, 375, 578, 601, 604, 637, 640 |
| Tsp45I | GTSAC | 2 cut(s) | 39, 1058 |
| TspDTI | ATGAA | 5 cut(s) | 144, 228, 737, 765, 1067 |
| TspGWI | ACGGA | 1 cut(s) | 680 |
| TspRI | CASTG | 2 cut(s) | 106, 279 |
| VpaK11BI | GGWCC | 2 cut(s) | 342, 939 |
| XapI | RAATTY | 4 cut(s) | 350, 528, 541, 1032 |
| XhoI | CTCGAG | 1 cut(s) | 225 |
| XmiI | GTMKAC | 1 cut(s) | 824 |
| XmnI | GAANNNNTTC | 2 cut(s) | 404, 1035 |
| XspI | CTAG | 1 cut(s) | 164 |
| Zsp2I | ATGCAT | 1 cut(s) | 259 |