ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 7 |
| AccB1I | GGYRCC | 1 cut(s) | 253 |
| AciI | CCGC | 1 cut(s) | 217 |
| AclWI | GGATC | 2 cut(s) | 116, 142 |
| AgsI | TTSAA | 2 cut(s) | 197, 238 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 230, 262 |
| AluBI | AGCT | 1 cut(s) | 209 |
| AluI | AGCT | 1 cut(s) | 209 |
| AlwI | GGATC | 2 cut(s) | 116, 142 |
| ApeKI | GCWGC | 1 cut(s) | 71 |
| AsuHPI | GGTGA | 1 cut(s) | 131 |
| BaeGI | GKGCMC | 1 cut(s) | 64 |
| BanI | GGYRCC | 1 cut(s) | 253 |
| BbvI | GCAGC | 1 cut(s) | 58 |
| BfuAI | ACCTGC | 1 cut(s) | 7 |
| BisI | GCNGC | 1 cut(s) | 72 |
| BlsI | GCNGC | 1 cut(s) | 73 |
| BmiI | GGNNCC | 1 cut(s) | 255 |
| Bse1I | ACTGG | 1 cut(s) | 163 |
| BseNI | ACTGG | 1 cut(s) | 163 |
| BseSI | GKGCMC | 1 cut(s) | 64 |
| BseXI | GCAGC | 1 cut(s) | 58 |
| BshNI | GGYRCC | 1 cut(s) | 253 |
| Bsp1286I | GDGCHC | 1 cut(s) | 64 |
| Bsp143I | GATC | 2 cut(s) | 121, 147 |
| BspACI | CCGC | 1 cut(s) | 217 |
| BspLI | GGNNCC | 1 cut(s) | 255 |
| BspMI | ACCTGC | 1 cut(s) | 7 |
| BspPI | GGATC | 2 cut(s) | 116, 142 |
| BspT107I | GGYRCC | 1 cut(s) | 253 |
| BsrI | ACTGG | 1 cut(s) | 163 |
| BssMI | GATC | 2 cut(s) | 121, 147 |
| Bst4CI | ACNGT | 1 cut(s) | 246 |
| Bst6I | CTCTTC | 2 cut(s) | 75, 86 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 68 |
| BstC8I | GCNNGC | 3 cut(s) | 69, 219, 288 |
| BstKTI | GATC | 2 cut(s) | 124, 150 |
| BstMBI | GATC | 2 cut(s) | 121, 147 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 68, 227 |
| BstNSI | RCATGY | 2 cut(s) | 71, 78 |
| BstSLI | GKGCMC | 1 cut(s) | 64 |
| BstV1I | GCAGC | 1 cut(s) | 58 |
| BstX2I | RGATCY | 1 cut(s) | 147 |
| BstYI | RGATCY | 1 cut(s) | 147 |
| BtsIMutI | CAGTG | 1 cut(s) | 290 |
| BveI | ACCTGC | 1 cut(s) | 7 |
| Cac8I | GCNNGC | 3 cut(s) | 69, 219, 288 |
| CviAII | CATG | 3 cut(s) | 68, 75, 177 |
| CviJI | RGCY | 2 cut(s) | 37, 209 |
| CviKI_1 | RGCY | 2 cut(s) | 37, 209 |
| DpnI | GATC | 2 cut(s) | 123, 149 |
| DpnII | GATC | 2 cut(s) | 121, 147 |
| Eam1104I | CTCTTC | 2 cut(s) | 75, 86 |
| EarI | CTCTTC | 2 cut(s) | 75, 86 |
| FaeI | CATG | 3 cut(s) | 71, 78, 180 |
| FaiI | YATR | 5 cut(s) | 14, 69, 76, 178, 272 |
| FatI | CATG | 3 cut(s) | 67, 74, 176 |
| FauI | CCCGC | 1 cut(s) | 210 |
| Fnu4HI | GCNGC | 1 cut(s) | 72 |
| Fsp4HI | GCNGC | 1 cut(s) | 72 |
| GluI | GCNGC | 1 cut(s) | 72 |
| Hin1II | CATG | 3 cut(s) | 71, 78, 180 |
| HinfI | GANTC | 1 cut(s) | 263 |
| HphI | GGTGA | 1 cut(s) | 131 |
| Hpy188I | TCNGA | 2 cut(s) | 44, 144 |
| HpyCH4III | ACNGT | 1 cut(s) | 246 |
| HpyCH4V | TGCA | 2 cut(s) | 16, 74 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 68, 227 |
| Hsp92II | CATG | 3 cut(s) | 71, 78, 180 |
| Kzo9I | GATC | 2 cut(s) | 121, 147 |
| LpnPI | CCDG | 4 cut(s) | 2, 43, 118, 144 |
| Lsp1109I | GCAGC | 1 cut(s) | 58 |
| MaeIII | GTNAC | 1 cut(s) | 109 |
| MalI | GATC | 2 cut(s) | 123, 149 |
| MboI | GATC | 2 cut(s) | 121, 147 |
| MboII | GAAGA | 4 cut(s) | 36, 92, 103, 157 |
| MflI | RGATCY | 1 cut(s) | 147 |
| MhlI | GDGCHC | 1 cut(s) | 64 |
| MluCI | AATT | 2 cut(s) | 53, 197 |
| MlyI | GAGTC | 1 cut(s) | 257 |
| MmeI | TCCRAC | 1 cut(s) | 228 |
| MnlI | CCTC | 4 cut(s) | 27, 76, 109, 244 |
| MseI | TTAA | 1 cut(s) | 171 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 68, 227 |
| NdeII | GATC | 2 cut(s) | 121, 147 |
| NlaIII | CATG | 3 cut(s) | 71, 78, 180 |
| NlaIV | GGNNCC | 1 cut(s) | 255 |
| NspI | RCATGY | 2 cut(s) | 71, 78 |
| PaeI | GCATGC | 1 cut(s) | 71 |
| PkrI | GCNGC | 1 cut(s) | 73 |
| PleI | GAGTC | 1 cut(s) | 257 |
| PpsI | GAGTC | 1 cut(s) | 257 |
| PspN4I | GGNNCC | 1 cut(s) | 255 |
| PsuI | RGATCY | 1 cut(s) | 147 |
| SaqAI | TTAA | 1 cut(s) | 171 |
| SatI | GCNGC | 1 cut(s) | 72 |
| Sau3AI | GATC | 2 cut(s) | 121, 147 |
| SchI | GAGTC | 1 cut(s) | 257 |
| SduI | GDGCHC | 1 cut(s) | 64 |
| SetI | ASST | 5 cut(s) | 21, 87, 211, 236, 259 |
| SphI | GCATGC | 1 cut(s) | 71 |
| Sse9I | AATT | 2 cut(s) | 53, 197 |
| SsiI | CCGC | 1 cut(s) | 217 |
| SspI | AATATT | 1 cut(s) | 298 |
| TaaI | ACNGT | 1 cut(s) | 246 |
| TasI | AATT | 2 cut(s) | 53, 197 |
| Tru1I | TTAA | 1 cut(s) | 171 |
| Tru9I | TTAA | 1 cut(s) | 171 |
| TscAI | CASTG | 1 cut(s) | 297 |
| TseI | GCWGC | 1 cut(s) | 71 |
| TspDTI | ATGAA | 2 cut(s) | 255, 287 |
| TspGWI | ACGGA | 2 cut(s) | 128, 140 |
| TspRI | CASTG | 1 cut(s) | 297 |
| XceI | RCATGY | 2 cut(s) | 71, 78 |