Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 231, 244 |
| AcsI | RAATTY | 1 cut(s) | 166 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 161, 233, 246 |
| AlwI | GGATC | 2 cut(s) | 231, 244 |
| ApoI | RAATTY | 1 cut(s) | 166 |
| AspS9I | GGNCC | 2 cut(s) | 118, 152 |
| AvaII | GGWCC | 2 cut(s) | 118, 152 |
| BamHI | GGATCC | 1 cut(s) | 236 |
| BccI | CCATC | 1 cut(s) | 143 |
| Bme18I | GGWCC | 2 cut(s) | 118, 152 |
| BmgT120I | GGNCC | 2 cut(s) | 118, 152 |
| BmiI | GGNNCC | 2 cut(s) | 154, 238 |
| Bsa29I | ATCGAT | 3 cut(s) | 147, 183, 194 |
| BsaJI | CCNNGG | 1 cut(s) | 240 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 161, 233, 246 |
| Bse3DI | GCAATG | 1 cut(s) | 87 |
| BseCI | ATCGAT | 3 cut(s) | 147, 183, 194 |
| BseDI | CCNNGG | 1 cut(s) | 240 |
| BseGI | GGATG | 1 cut(s) | 256 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 161, 233, 246 |
| BseMI | GCAATG | 1 cut(s) | 87 |
| BshVI | ATCGAT | 3 cut(s) | 147, 183, 194 |
| BslFI | GGGAC | 1 cut(s) | 138 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 161, 233, 246 |
| BsmFI | GGGAC | 1 cut(s) | 138 |
| Bsp143I | GATC | 1 cut(s) | 236 |
| BspDI | ATCGAT | 3 cut(s) | 147, 183, 194 |
| BspLI | GGNNCC | 2 cut(s) | 154, 238 |
| BspPI | GGATC | 2 cut(s) | 231, 244 |
| BsrDI | GCAATG | 1 cut(s) | 87 |
| BssECI | CCNNGG | 1 cut(s) | 240 |
| BssMI | GATC | 1 cut(s) | 236 |
| BssT1I | CCWWGG | 1 cut(s) | 240 |
| Bst4CI | ACNGT | 1 cut(s) | 46 |
| BstF5I | GGATG | 1 cut(s) | 256 |
| BstKTI | GATC | 1 cut(s) | 239 |
| BstMBI | GATC | 1 cut(s) | 236 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 218 |
| BstX2I | RGATCY | 1 cut(s) | 236 |
| BstYI | RGATCY | 1 cut(s) | 236 |
| Bsu15I | ATCGAT | 3 cut(s) | 147, 183, 194 |
| BsuTUI | ATCGAT | 3 cut(s) | 147, 183, 194 |
| BtsCI | GGATG | 1 cut(s) | 256 |
| BtsIMutI | CAGTG | 1 cut(s) | 37 |
| Cfr13I | GGNCC | 2 cut(s) | 118, 152 |
| ClaI | ATCGAT | 3 cut(s) | 147, 183, 194 |
| DpnI | GATC | 1 cut(s) | 238 |
| DpnII | GATC | 1 cut(s) | 236 |
| Eco130I | CCWWGG | 1 cut(s) | 240 |
| Eco47I | GGWCC | 2 cut(s) | 118, 152 |
| EcoT14I | CCWWGG | 1 cut(s) | 240 |
| ErhI | CCWWGG | 1 cut(s) | 240 |
| FaiI | YATR | 6 cut(s) | 11, 13, 18, 101, 191, 205 |
| FaqI | GGGAC | 1 cut(s) | 138 |
| Hpy188III | TCNNGA | 1 cut(s) | 155 |
| Hpy99I | CGWCG | 1 cut(s) | 176 |
| HpyCH4III | ACNGT | 1 cut(s) | 46 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 218 |
| Kzo9I | GATC | 1 cut(s) | 236 |
| LpnPI | CCDG | 1 cut(s) | 73 |
| MalI | GATC | 1 cut(s) | 238 |
| MboI | GATC | 1 cut(s) | 236 |
| MboII | GAAGA | 1 cut(s) | 103 |
| MflI | RGATCY | 1 cut(s) | 236 |
| MluCI | AATT | 1 cut(s) | 166 |
| MmeI | TCCRAC | 2 cut(s) | 28, 214 |
| MnlI | CCTC | 2 cut(s) | 62, 131 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 218 |
| NdeII | GATC | 1 cut(s) | 236 |
| NlaIV | GGNNCC | 2 cut(s) | 154, 238 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 153, 168, 180 |
| PspN4I | GGNNCC | 2 cut(s) | 154, 238 |
| PspPI | GGNCC | 2 cut(s) | 118, 152 |
| PsuI | RGATCY | 1 cut(s) | 236 |
| Sau3AI | GATC | 1 cut(s) | 236 |
| Sau96I | GGNCC | 2 cut(s) | 118, 152 |
| SgeI | CNNG | 8 cut(s) | 77, 100, 127, 142, 149, 167, 239, 253 |
| SinI | GGWCC | 2 cut(s) | 118, 152 |
| Sse9I | AATT | 1 cut(s) | 166 |
| StyI | CCWWGG | 1 cut(s) | 240 |
| TaaI | ACNGT | 1 cut(s) | 46 |
| TaqI | TCGA | 6 cut(s) | 129, 136, 147, 171, 183, 194 |
| TasI | AATT | 1 cut(s) | 166 |
| TscAI | CASTG | 1 cut(s) | 37 |
| TspGWI | ACGGA | 2 cut(s) | 177, 189 |
| TspRI | CASTG | 1 cut(s) | 37 |
| VpaK11BI | GGWCC | 2 cut(s) | 118, 152 |
| XapI | RAATTY | 1 cut(s) | 166 |